RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 KRTAP12-2P59991 146 aa3.76□□□□□ -1.81
VMP1-215ENST00000592619 RHOHQ15669 191 aa3.76□□□□□ -1.81
VMP1-215ENST00000592619 ZNF826PQ6ZT77 177 aa3.76□□□□□ -1.81
VMP1-215ENST00000592619 MED13LQ71F56 2210 aa3.75□□□□□ -1.81
VMP1-215ENST00000592619 hDV103S1A0JD37 113 aa3.75□□□□□ -1.81
VMP1-215ENST00000592619 H3BSH0 61 aa3.75□□□□□ -1.81
VMP1-215ENST00000592619 RPL28P46779 137 aaKnown RBP3.75□□□□□ -1.81
VMP1-215ENST00000592619 FXYD2P54710 66 aa3.75□□□□□ -1.81
VMP1-215ENST00000592619 CAV3P56539 151 aa3.75□□□□□ -1.81
VMP1-215ENST00000592619 EIF4EBP1Q13541 118 aaPredicted RBP3.75□□□□□ -1.81
VMP1-215ENST00000592619 MPV17LQ2QL34 196 aa3.75□□□□□ -1.81
VMP1-215ENST00000592619 TMEM136Q6ZRR5 245 aa3.75□□□□□ -1.81
VMP1-215ENST00000592619 Q8N814 137 aa3.75□□□□□ -1.81
VMP1-215ENST00000592619 DEFB108BQ8NET1 73 aa3.75□□□□□ -1.81
VMP1-215ENST00000592619 MUC7Q8TAX7 377 aa3.75□□□□□ -1.81
VMP1-215ENST00000592619 TMEM141Q96I45 108 aa3.75□□□□□ -1.81
VMP1-215ENST00000592619 GAFA1Q96PS6 74 aa3.75□□□□□ -1.81
VMP1-215ENST00000592619 NXT2Q9NPJ8 142 aaKnown RBP3.75□□□□□ -1.81
VMP1-215ENST00000592619 F8P00451 2351 aa3.75□□□□□ -1.81
VMP1-215ENST00000592619 ABCA2Q9BZC7 2435 aa3.74□□□□□ -1.81
VMP1-215ENST00000592619 NSD1Q96L73 2696 aaPredicted RBP3.74□□□□□ -1.81
VMP1-215ENST00000592619 IGKV1D-17A0A075B6S4 117 aa3.74□□□□□ -1.81
VMP1-215ENST00000592619 TRAV2A0A0B4J234 112 aa3.74□□□□□ -1.81
VMP1-215ENST00000592619 BCE1O60756 84 aa3.74□□□□□ -1.81
VMP1-215ENST00000592619 ACYP1P07311 99 aa3.74□□□□□ -1.81
VMP1-215ENST00000592619 RBM3P98179 157 aaKnown RBP3.74□□□□□ -1.81
VMP1-215ENST00000592619 ZNF816Q0VGE8 651 aaPredicted RBP3.74□□□□□ -1.81
VMP1-215ENST00000592619 CFAP126Q5VTH2 177 aa3.74□□□□□ -1.81
VMP1-215ENST00000592619 MIR7-3HGQ8N6C7 128 aa3.74□□□□□ -1.81
VMP1-215ENST00000592619 DYNLRB2Q8TF09 96 aa3.74□□□□□ -1.81
VMP1-215ENST00000592619 ODF3Q96PU9 254 aa3.74□□□□□ -1.81
VMP1-215ENST00000592619 SMIM7Q9BQ49 75 aa3.74□□□□□ -1.81
VMP1-215ENST00000592619 TRAPPC1Q9Y5R8 145 aa3.74□□□□□ -1.81
VMP1-215ENST00000592619 U3KQK5 164 aa3.74□□□□□ -1.81
VMP1-215ENST00000592619 IGKV2-28A0A075B6P5 120 aa3.73□□□□□ -1.81
VMP1-215ENST00000592619 TCRBV4S1A1TA0A5B7 111 aa3.73□□□□□ -1.81
VMP1-215ENST00000592619 PIN1P1O15428 100 aa3.73□□□□□ -1.81
VMP1-215ENST00000592619 IGKV2D-28P01615 120 aa3.73□□□□□ -1.81
VMP1-215ENST00000592619 RNASE2P10153 161 aaKnown RBP3.73□□□□□ -1.81
VMP1-215ENST00000592619 ROMO1P60602 79 aa3.73□□□□□ -1.81
VMP1-215ENST00000592619 C2orf91Q6ZV80 131 aa3.73□□□□□ -1.81
VMP1-215ENST00000592619 LYZL2Q7Z4W2 148 aa3.73□□□□□ -1.81
VMP1-215ENST00000592619 LYPD6Q86Y78 171 aa3.73□□□□□ -1.81
VMP1-215ENST00000592619 LINC00269Q8N2A0 174 aa3.73□□□□□ -1.81
VMP1-215ENST00000592619 LINC00474Q9P2X8 69 aa3.73□□□□□ -1.81
VMP1-215ENST00000592619 NDUFA12Q9UI09 145 aa3.73□□□□□ -1.81
VMP1-215ENST00000592619 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.73□□□□□ -1.812e-8■■■■■ 85.3
VMP1-215ENST00000592619 NF1P21359 2839 aa3.73□□□□□ -1.81
VMP1-215ENST00000592619 DNHD1Q96M86 4753 aa3.73□□□□□ -1.81
VMP1-215ENST00000592619 TRAV1-2A0A0B4J238 106 aa3.72□□□□□ -1.81
VMP1-215ENST00000592619 UMAD1C9J7I0 102 aa3.72□□□□□ -1.81
VMP1-215ENST00000592619 M0R1W7 72 aa3.72□□□□□ -1.81
VMP1-215ENST00000592619 SMIM13P0DJ93 91 aa3.72□□□□□ -1.81
VMP1-215ENST00000592619 ESRGQ1W209 222 aa3.72□□□□□ -1.81
VMP1-215ENST00000592619 SCRT1Q9BWW7 348 aa3.72□□□□□ -1.81
VMP1-215ENST00000592619 ICOSQ9Y6W8 199 aa3.72□□□□□ -1.81
VMP1-215ENST00000592619 ACANP16112 2415 aa3.71□□□□□ -1.82
VMP1-215ENST00000592619 MALRD1Q5VYJ5 2156 aa3.71□□□□□ -1.82
VMP1-215ENST00000592619 TRBV10-2A0A0K0K1G8 114 aa3.71□□□□□ -1.82
VMP1-215ENST00000592619 F2Z2F3 143 aa3.71□□□□□ -1.82
VMP1-215ENST00000592619 KRTAP21-3Q3LHN1 58 aa3.71□□□□□ -1.82
VMP1-215ENST00000592619 VMO1Q7Z5L0 202 aa3.71□□□□□ -1.82
VMP1-215ENST00000592619 FAM19A2Q8N3H0 131 aa3.71□□□□□ -1.82
VMP1-215ENST00000592619 SPANXA2-OT1Q8N9U9 137 aa3.71□□□□□ -1.82
VMP1-215ENST00000592619 C1orf64Q8NEQ6 169 aa3.71□□□□□ -1.82
VMP1-215ENST00000592619 LINC00574Q9H8X3 128 aa3.71□□□□□ -1.82
VMP1-215ENST00000592619 HIGD1BQ9P298 99 aa3.71□□□□□ -1.82
VMP1-215ENST00000592619 NIPBLQ6KC79 2804 aaeCLIP3.71□□□□□ -1.82
VMP1-215ENST00000592619 PLXNB1O43157 2135 aa3.71□□□□□ -1.82
VMP1-215ENST00000592619 MXRA5Q9NR99 2828 aa3.71□□□□□ -1.82
VMP1-215ENST00000592619 HIVEP2P31629 2446 aa3.7□□□□□ -1.82
VMP1-215ENST00000592619 TRAV7A0A075B6U4 112 aa3.7□□□□□ -1.82
VMP1-215ENST00000592619 IGKV2D-26A0A0A0MRZ7 120 aa3.7□□□□□ -1.82
VMP1-215ENST00000592619 TRAV40A0A0B4J280 105 aa3.7□□□□□ -1.82
VMP1-215ENST00000592619 A8MUU9 505 aa3.7□□□□□ -1.82
VMP1-215ENST00000592619 C17orf98A8MV24 154 aa3.7□□□□□ -1.82
VMP1-215ENST00000592619 TFF1P04155 84 aa3.7□□□□□ -1.82
VMP1-215ENST00000592619 EDDM3BP56851 147 aa3.7□□□□□ -1.82
VMP1-215ENST00000592619 LINC00315P59091 139 aa3.7□□□□□ -1.82
VMP1-215ENST00000592619 PIGYQ3MUY2 71 aa3.7□□□□□ -1.82
VMP1-215ENST00000592619 LYPD5Q6UWN5 251 aa3.7□□□□□ -1.82
VMP1-215ENST00000592619 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
VMP1-215ENST00000592619 CYP4F30PQ9H0H9 118 aa3.7□□□□□ -1.82
VMP1-215ENST00000592619 CYSTM1Q9H1C7 97 aa3.7□□□□□ -1.82
VMP1-215ENST00000592619 DOCK11Q5JSL3 2073 aa3.7□□□□□ -1.82
VMP1-215ENST00000592619 ABCA1O95477 2261 aa3.7□□□□□ -1.82
VMP1-215ENST00000592619 TEP1Q99973 2627 aaKnown RBP3.69□□□□□ -1.82
VMP1-215ENST00000592619 TRAV13-2A0A0B4J235 113 aa3.69□□□□□ -1.82
VMP1-215ENST00000592619 LOC107984156A0A0G2JMH3 177 aa3.69□□□□□ -1.82
VMP1-215ENST00000592619 TMEM30CPA0ZSE6 113 aa3.69□□□□□ -1.82
VMP1-215ENST00000592619 LRCOL1A6NCL2 159 aa3.69□□□□□ -1.82
VMP1-215ENST00000592619 TMEM14DPA8MWL7 114 aa3.69□□□□□ -1.82
VMP1-215ENST00000592619 H3BPC8 53 aa3.69□□□□□ -1.82
VMP1-215ENST00000592619 S100A7L2Q5SY68 101 aa3.69□□□□□ -1.82
VMP1-215ENST00000592619 C1orf134Q5TEV5 83 aa3.69□□□□□ -1.82
VMP1-215ENST00000592619 Q6ZQT0 140 aa3.69□□□□□ -1.82
VMP1-215ENST00000592619 LINC00643Q86TS7 51 aa3.69□□□□□ -1.82
VMP1-215ENST00000592619 ARL17AQ8IVW1 177 aa3.69□□□□□ -1.82
VMP1-215ENST00000592619 CMTM2Q8TAZ6 248 aa3.69□□□□□ -1.82
VMP1-215ENST00000592619 TIMM9Q9Y5J7 89 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms