RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 NHLRC4P0CG21 123 aaPredicted RBP9.99□□□□□ -0.81
CDK5RAP3-218ENST00000580391 MALP21145 153 aa9.99□□□□□ -0.81
CDK5RAP3-218ENST00000580391 Q8IZM0 81 aa9.99□□□□□ -0.81
CDK5RAP3-218ENST00000580391 H3BUT2 72 aa9.98□□□□□ -0.81
CDK5RAP3-218ENST00000580391 EIF4EBP3O60516 100 aaPredicted RBP9.98□□□□□ -0.81
CDK5RAP3-218ENST00000580391 PRSS2P07478 247 aa9.98□□□□□ -0.81
CDK5RAP3-218ENST00000580391 DNAH10OSP0CZ25 163 aa9.98□□□□□ -0.81
CDK5RAP3-218ENST00000580391 DNAH7Q8WXX0 4024 aa9.98□□□□□ -0.81
CDK5RAP3-218ENST00000580391 CCL18P55774 89 aa9.97□□□□□ -0.81
CDK5RAP3-218ENST00000580391 CIRBPQ14011 172 aaKnown RBP9.97□□□□□ -0.81
CDK5RAP3-218ENST00000580391 TRAV8-4A0A0B4J246 113 aa9.97□□□□□ -0.81
CDK5RAP3-218ENST00000580391 KIAA0087Q14695 138 aa9.97□□□□□ -0.81
CDK5RAP3-218ENST00000580391 C6orf226Q5I0X4 101 aa9.97□□□□□ -0.81
CDK5RAP3-218ENST00000580391 C2orf82Q6UX34 121 aa9.97□□□□□ -0.81
CDK5RAP3-218ENST00000580391 CFC1BP0CG36 223 aa9.96□□□□□ -0.81
CDK5RAP3-218ENST00000580391 CFC1P0CG37 223 aa9.96□□□□□ -0.81
CDK5RAP3-218ENST00000580391 RPL24P83731 157 aaKnown RBP9.96□□□□□ -0.81
CDK5RAP3-218ENST00000580391 KRTAP26-1Q6PEX3 210 aa9.95□□□□□ -0.82
CDK5RAP3-218ENST00000580391 STARD9Q9P2P6 4700 aa9.95□□□□□ -0.82
CDK5RAP3-218ENST00000580391 VAMP3Q15836 100 aa9.94□□□□□ -0.82
CDK5RAP3-218ENST00000580391 SOSTDC1Q6X4U4 206 aa9.94□□□□□ -0.82
CDK5RAP3-218ENST00000580391 SPAG11BQ08648 103 aa9.94□□□□□ -0.82
CDK5RAP3-218ENST00000580391 CFAP161Q6P656 301 aa9.94□□□□□ -0.82
CDK5RAP3-218ENST00000580391 LINC00308Q8TCZ7 52 aa9.94□□□□□ -0.82
CDK5RAP3-218ENST00000580391 IFITM1P13164 125 aa9.93□□□□□ -0.82
CDK5RAP3-218ENST00000580391 SFTA2Q6UW10 78 aa9.93□□□□□ -0.82
CDK5RAP3-218ENST00000580391 LINC00526Q96FQ7 95 aa9.93□□□□□ -0.82
CDK5RAP3-218ENST00000580391 UPK3BQ9BT76 320 aa9.93□□□□□ -0.82
CDK5RAP3-218ENST00000580391 Q9HAA7 133 aa9.93□□□□□ -0.82
CDK5RAP3-218ENST00000580391 PGPEP1Q9NXJ5 209 aa9.93□□□□□ -0.82
CDK5RAP3-218ENST00000580391 A0A1W2PPM0 123 aa9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 CKS1BP61024 79 aa9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 MIR7-3HGQ8N6C7 128 aa9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 C1orf43Q9BWL3 253 aa9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 APLNQ9ULZ1 77 aa9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 IBA57-AS1B1ANH7 110 aa9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 PFN2P35080 140 aa9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 C6orf223Q8N319 242 aa9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 ERG28Q9UKR5 140 aa9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 KLK5Q9Y337 293 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-218ENST00000580391 IGKV2D-24A0A075B6R9 120 aa9.91□□□□□ -0.82
CDK5RAP3-218ENST00000580391 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.91□□□□□ -0.82
CDK5RAP3-218ENST00000580391 A0A0B4J2C4 111 aa9.91□□□□□ -0.82
CDK5RAP3-218ENST00000580391 TSPAN13O95857 204 aa9.91□□□□□ -0.82
CDK5RAP3-218ENST00000580391 CXCL5P42830 114 aa9.91□□□□□ -0.82
CDK5RAP3-218ENST00000580391 LINC00158P58513 81 aa9.91□□□□□ -0.82
CDK5RAP3-218ENST00000580391 PRO1854Q9UHT4 67 aa9.9□□□□□ -0.83
CDK5RAP3-218ENST00000580391 C10orf25Q5T742 122 aa9.88□□□□□ -0.83
CDK5RAP3-218ENST00000580391 TENM2Q9NT68 2774 aa9.88□□□□□ -0.83
CDK5RAP3-218ENST00000580391 NUPR2A6NF83 97 aa9.88□□□□□ -0.83
CDK5RAP3-218ENST00000580391 FABP2P12104 132 aa9.88□□□□□ -0.83
CDK5RAP3-218ENST00000580391 HIGD2BQ4VC39 106 aa9.88□□□□□ -0.83
CDK5RAP3-218ENST00000580391 C9orf116Q5BN46 136 aaPredicted RBP9.88□□□□□ -0.83
CDK5RAP3-218ENST00000580391 C15orf56Q8N910 161 aa9.88□□□□□ -0.83
CDK5RAP3-218ENST00000580391 DNAH10Q8IVF4 4471 aa9.88□□□□□ -0.83
CDK5RAP3-218ENST00000580391 FBN3Q75N90 2809 aa9.87□□□□□ -0.83
CDK5RAP3-218ENST00000580391 UBE2V1Q13404 147 aa9.87□□□□□ -0.83
CDK5RAP3-218ENST00000580391 UNQ6190/PRO20217Q6UXQ8 127 aa9.87□□□□□ -0.83
CDK5RAP3-218ENST00000580391 UBE2DNLQ8IWF7 75 aa9.86□□□□□ -0.83
CDK5RAP3-218ENST00000580391 COPS9Q8WXC6 57 aa9.86□□□□□ -0.83
CDK5RAP3-218ENST00000580391 SPCS1Q9Y6A9 102 aa9.86□□□□□ -0.83
CDK5RAP3-218ENST00000580391 H7C2G1 150 aa9.86□□□□□ -0.83
CDK5RAP3-218ENST00000580391 K7EP34 96 aa9.86□□□□□ -0.83
CDK5RAP3-218ENST00000580391 NTN5Q8WTR8 489 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP3-218ENST00000580391 VPS13DQ5THJ4 4388 aa9.85□□□□□ -0.83
CDK5RAP3-218ENST00000580391 GAGE10A6NGK3 116 aa9.84□□□□□ -0.83
CDK5RAP3-218ENST00000580391 KRTAP1-5Q9BYS1 174 aa9.84□□□□□ -0.83
CDK5RAP3-218ENST00000580391 PPDPFQ9H3Y8 114 aa9.84□□□□□ -0.83
CDK5RAP3-218ENST00000580391 CASC10Q5T4H9 136 aa9.83□□□□□ -0.84
CDK5RAP3-218ENST00000580391 LOC107984156A0A0G2JMH3 177 aa9.83□□□□□ -0.84
CDK5RAP3-218ENST00000580391 ZNF561-AS1K7EIQ3 104 aa9.83□□□□□ -0.84
CDK5RAP3-218ENST00000580391 RPL13AP40429 203 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-218ENST00000580391 Q1RN00 199 aa9.83□□□□□ -0.84
CDK5RAP3-218ENST00000580391 ARL17AQ8IVW1 177 aa9.83□□□□□ -0.84
CDK5RAP3-218ENST00000580391 SND1-IT1Q9HBX3 110 aa9.83□□□□□ -0.84
CDK5RAP3-218ENST00000580391 C6orf48Q9UBA6 75 aa9.83□□□□□ -0.84
CDK5RAP3-218ENST00000580391 COX17Q14061 63 aa9.82□□□□□ -0.84
CDK5RAP3-218ENST00000580391 GTF2H5Q6ZYL4 71 aa9.82□□□□□ -0.84
CDK5RAP3-218ENST00000580391 CAMK2N2Q96S95 79 aa9.81□□□□□ -0.84
CDK5RAP3-218ENST00000580391 GVQW2A0A096LPI5 108 aaPredicted RBP9.8□□□□□ -0.84
CDK5RAP3-218ENST00000580391 IGKV2-28A0A075B6P5 120 aa9.79□□□□□ -0.84
CDK5RAP3-218ENST00000580391 IGKV2D-28P01615 120 aa9.79□□□□□ -0.84
CDK5RAP3-218ENST00000580391 Q6ZRU5 148 aa9.79□□□□□ -0.84
CDK5RAP3-218ENST00000580391 RMI2Q96E14 147 aa9.79□□□□□ -0.84
CDK5RAP3-218ENST00000580391 PSMB2P49721 201 aa9.79□□□□□ -0.84
CDK5RAP3-218ENST00000580391 TRIAP1O43715 76 aa9.78□□□□□ -0.84
CDK5RAP3-218ENST00000580391 LINC00337Q8N6G1 96 aa9.78□□□□□ -0.84
CDK5RAP3-218ENST00000580391 C2orf48Q96LS8 159 aa9.78□□□□□ -0.84
CDK5RAP3-218ENST00000580391 USP17L23D6RBM5 183 aa9.77□□□□□ -0.84
CDK5RAP3-218ENST00000580391 TGP01266 2768 aa9.77□□□□□ -0.85
CDK5RAP3-218ENST00000580391 TRBV30A0A0K0K1B3 111 aa9.77□□□□□ -0.85
CDK5RAP3-218ENST00000580391 H3BMG7 143 aa9.76□□□□□ -0.85
CDK5RAP3-218ENST00000580391 LYRM7Q5U5X0 104 aa9.76□□□□□ -0.85
CDK5RAP3-218ENST00000580391 LECT2O14960 151 aa9.75□□□□□ -0.85
CDK5RAP3-218ENST00000580391 Q8NDZ9 215 aa9.75□□□□□ -0.85
CDK5RAP3-218ENST00000580391 TCL1BO95988 128 aa9.75□□□□□ -0.85
CDK5RAP3-218ENST00000580391 SCGB1C2P0DMR2 95 aa9.75□□□□□ -0.85
CDK5RAP3-218ENST00000580391 TRAV13-2A0A0B4J235 113 aa9.74□□□□□ -0.85
CDK5RAP3-218ENST00000580391 MUC7Q8TAX7 377 aa9.74□□□□□ -0.85
CDK5RAP3-218ENST00000580391 SYCNQ0VAF6 134 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms