RNA–Protein interactions for RNA: ENST00000578698.1

PTPRM-209, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-209ENST00000578698 A6NIN4 97 aa1.54□□□□□ -2.16
PTPRM-209ENST00000578698 CEBPZOSA8MTT3 80 aa1.54□□□□□ -2.16
PTPRM-209ENST00000578698 IQCF6A8MYZ5 107 aa1.54□□□□□ -2.16
PTPRM-209ENST00000578698 PPYP01298 95 aa1.54□□□□□ -2.16
PTPRM-209ENST00000578698 IGHV3-33P01772 117 aa1.54□□□□□ -2.16
PTPRM-209ENST00000578698 HMGA1P17096 107 aaKnown RBP1.54□□□□□ -2.16
PTPRM-209ENST00000578698 KRTAP6-3Q3LI67 103 aa1.54□□□□□ -2.16
PTPRM-209ENST00000578698 Q86TA4 180 aa1.54□□□□□ -2.16
PTPRM-209ENST00000578698 Q8N6K4 173 aa1.54□□□□□ -2.16
PTPRM-209ENST00000578698 PPP1R1CQ8WVI7 109 aa1.54□□□□□ -2.16
PTPRM-209ENST00000578698 C4orf3Q8WVX3 66 aa1.54□□□□□ -2.16
PTPRM-209ENST00000578698 CMC2Q9NRP2 79 aa1.54□□□□□ -2.16
PTPRM-209ENST00000578698 TMEM14BQ9NUH8 114 aa1.54□□□□□ -2.16
PTPRM-209ENST00000578698 PRUNE2Q8WUY3 3088 aa1.54□□□□□ -2.16
PTPRM-209ENST00000578698 ARFGEF2Q9Y6D5 1785 aa1.54□□□□□ -2.16
PTPRM-209ENST00000578698 PDCD11Q14690 1871 aaKnown RBP1.54□□□□□ -2.16
PTPRM-209ENST00000578698 FAM186AA6NE01 2351 aa1.54□□□□□ -2.16
PTPRM-209ENST00000578698 TRAV23DV6A0A075B6W5 121 aa1.53□□□□□ -2.16
PTPRM-209ENST00000578698 SSC5DA1L4H1 1573 aa1.53□□□□□ -2.16
PTPRM-209ENST00000578698 CNOT1A5YKK6 2376 aaKnown RBP1.53□□□□□ -2.16
PTPRM-209ENST00000578698 FAM223BA6NKX1 122 aa1.53□□□□□ -2.16
PTPRM-209ENST00000578698 C10orf142B7Z368 130 aa1.53□□□□□ -2.16
PTPRM-209ENST00000578698 LAMB1P07942 1786 aa1.53□□□□□ -2.16
PTPRM-209ENST00000578698 KRTAP12-1P59990 96 aa1.53□□□□□ -2.16
PTPRM-209ENST00000578698 PLGLAQ15195 96 aa1.53□□□□□ -2.16
PTPRM-209ENST00000578698 KRTAP21-3Q3LHN1 58 aa1.53□□□□□ -2.16
PTPRM-209ENST00000578698 PCOTHQ58A44 107 aa1.53□□□□□ -2.16
PTPRM-209ENST00000578698 GCC2Q8IWJ2 1684 aa1.53□□□□□ -2.16
PTPRM-209ENST00000578698 C20orf197Q8N268 126 aa1.53□□□□□ -2.16
PTPRM-209ENST00000578698 EXPH5Q8NEV8 1989 aa1.53□□□□□ -2.16
PTPRM-209ENST00000578698 PAPPA2Q9BXP8 1791 aa1.53□□□□□ -2.16
PTPRM-209ENST00000578698 ABRACLQ9P1F3 81 aa1.53□□□□□ -2.16
PTPRM-209ENST00000578698 HILPDAQ9Y5L2 63 aa1.53□□□□□ -2.16
PTPRM-209ENST00000578698 USP34Q70CQ2 3546 aa1.52□□□□□ -2.17
PTPRM-209ENST00000578698 TIAM2Q8IVF5 1701 aa1.52□□□□□ -2.17
PTPRM-209ENST00000578698 ZNF292O60281 2723 aa1.52□□□□□ -2.17
PTPRM-209ENST00000578698 GCN1Q92616 2671 aaKnown RBP1.52□□□□□ -2.17
PTPRM-209ENST00000578698 HCRTO43612 131 aa1.52□□□□□ -2.17
PTPRM-209ENST00000578698 ELOF1P60002 83 aaKnown RBP1.52□□□□□ -2.17
PTPRM-209ENST00000578698 S100A7L2Q5SY68 101 aa1.52□□□□□ -2.17
PTPRM-209ENST00000578698 AMELXQ99217 191 aa1.52□□□□□ -2.17
PTPRM-209ENST00000578698 ARL2-SNX15V9GYD0 113 aa1.52□□□□□ -2.17
PTPRM-209ENST00000578698 TNRC6BQ9UPQ9 1833 aaKnown RBP1.52□□□□□ -2.17
PTPRM-209ENST00000578698 SIPA1L3O60292 1781 aaPredicted RBP1.52□□□□□ -2.17
PTPRM-209ENST00000578698 LY75O60449 1722 aa1.52□□□□□ -2.17
PTPRM-209ENST00000578698 C4AP0C0L4 1744 aa1.52□□□□□ -2.17
PTPRM-209ENST00000578698 CRYBG1Q9Y4K1 1723 aa1.52□□□□□ -2.17
PTPRM-209ENST00000578698 E9PCH4 1651 aa1.51□□□□□ -2.17
PTPRM-209ENST00000578698 TRBV7-4A0A0J9YYF1 115 aa1.51□□□□□ -2.17
PTPRM-209ENST00000578698 TRBV30A0A0K0K1B3 111 aa1.51□□□□□ -2.17
PTPRM-209ENST00000578698 TEX49A0A1B0GTD5 131 aa1.51□□□□□ -2.17
PTPRM-209ENST00000578698 F8WEM9 126 aa1.51□□□□□ -2.17
PTPRM-209ENST00000578698 IGLV3-1P01715 115 aa1.51□□□□□ -2.17
PTPRM-209ENST00000578698 IFI6P09912 130 aa1.51□□□□□ -2.17
PTPRM-209ENST00000578698 SAA2P0DJI9 122 aaPredicted RBP1.51□□□□□ -2.17
PTPRM-209ENST00000578698 ATXN8Q156A1 80 aa1.51□□□□□ -2.17
PTPRM-209ENST00000578698 NCBP2-AS2Q69YL0 99 aa1.51□□□□□ -2.17
PTPRM-209ENST00000578698 WFDC10AQ9H1F0 79 aa1.51□□□□□ -2.17
PTPRM-209ENST00000578698 PSENENQ9NZ42 101 aa1.51□□□□□ -2.17
PTPRM-209ENST00000578698 PLAC8Q9NZF1 115 aa1.51□□□□□ -2.17
PTPRM-209ENST00000578698 DOPEY1Q5JWR5 2465 aa1.51□□□□□ -2.17
PTPRM-209ENST00000578698 SPTA1P02549 2419 aa1.51□□□□□ -2.17
PTPRM-209ENST00000578698 C4BP0C0L5 1744 aa1.51□□□□□ -2.17
PTPRM-209ENST00000578698 C5P01031 1676 aa1.51□□□□□ -2.17
PTPRM-209ENST00000578698 DOCK11Q5JSL3 2073 aa1.51□□□□□ -2.17
PTPRM-209ENST00000578698 CACNA1HO95180 2353 aa1.5□□□□□ -2.17
PTPRM-209ENST00000578698 PLXNA1Q9UIW2 1896 aa1.5□□□□□ -2.17
PTPRM-209ENST00000578698 REV3LO60673 3130 aa1.5□□□□□ -2.17
PTPRM-209ENST00000578698 TJP1Q07157 1748 aa1.5□□□□□ -2.17
PTPRM-209ENST00000578698 ABCA12Q86UK0 2595 aa1.5□□□□□ -2.17
PTPRM-209ENST00000578698 TRAV1-2A0A0B4J238 106 aa1.5□□□□□ -2.17
PTPRM-209ENST00000578698 HIGD1CA8MV81 97 aa1.5□□□□□ -2.17
PTPRM-209ENST00000578698 JMJD7-PLA2G4BH0Y9G9 81 aa1.5□□□□□ -2.17
PTPRM-209ENST00000578698 LEPROTL1O95214 131 aa1.5□□□□□ -2.17
PTPRM-209ENST00000578698 IL9P15248 144 aa1.5□□□□□ -2.17
PTPRM-209ENST00000578698 EDDM3BP56851 147 aa1.5□□□□□ -2.17
PTPRM-209ENST00000578698 SNRPGP62308 76 aaKnown RBP1.5□□□□□ -2.17
PTPRM-209ENST00000578698 GDF5OSQ5U4N7 250 aa1.5□□□□□ -2.17
PTPRM-209ENST00000578698 SPTSSBQ8NFR3 76 aa1.5□□□□□ -2.17
PTPRM-209ENST00000578698 TET1Q8NFU7 2136 aa1.5□□□□□ -2.17
PTPRM-209ENST00000578698 ZCCHC13Q8WW36 166 aaKnown RBP1.5□□□□□ -2.17
PTPRM-209ENST00000578698 FAM103A1Q9BTL3 118 aaKnown RBP1.5□□□□□ -2.17
PTPRM-209ENST00000578698 NCOR2Q9Y618 2525 aa1.5□□□□□ -2.17
PTPRM-209ENST00000578698 DCHS1Q96JQ0 3298 aa1.5□□□□□ -2.17
PTPRM-209ENST00000578698 SPAG17Q6Q759 2223 aa1.5□□□□□ -2.17
PTPRM-209ENST00000578698 MYO18BQ8IUG5 2567 aa1.5□□□□□ -2.17
PTPRM-209ENST00000578698 A0A0J9YY99 117 aa1.49□□□□□ -2.17
PTPRM-209ENST00000578698 LCE6AA0A183 80 aa1.49□□□□□ -2.17
PTPRM-209ENST00000578698 CLPSL1A2RUU4 121 aa1.49□□□□□ -2.17
PTPRM-209ENST00000578698 ZNF815PA8K554 130 aa1.49□□□□□ -2.17
PTPRM-209ENST00000578698 CHKB-CPT1BH3BT56 60 aa1.49□□□□□ -2.17
PTPRM-209ENST00000578698 PROK2Q9HC23 129 aa1.49□□□□□ -2.17
PTPRM-209ENST00000578698 NDUFA4L2Q9NRX3 87 aa1.49□□□□□ -2.17
PTPRM-209ENST00000578698 LENEPQ9Y5L5 61 aa1.49□□□□□ -2.17
PTPRM-209ENST00000578698 MYO7AQ13402 2215 aa1.49□□□□□ -2.17
PTPRM-209ENST00000578698 PLXNA2O75051 1894 aa1.49□□□□□ -2.17
PTPRM-209ENST00000578698 DNAH12Q6ZR08 3092 aa1.49□□□□□ -2.17
PTPRM-209ENST00000578698 CDH23Q9H251 3354 aa1.49□□□□□ -2.17
PTPRM-209ENST00000578698 MYO7BQ6PIF6 2116 aa1.49□□□□□ -2.17
PTPRM-209ENST00000578698 MUC22E2RYF6 1773 aaPredicted RBP1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms