RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 LINC00959A0A1B0GUT2 108 aa0.61□□□□□ -2.31
TRAPPC8-203ENST00000577474 COX6B1P14854 86 aa0.61□□□□□ -2.31
TRAPPC8-203ENST00000577474 U3KQA8 63 aa0.61□□□□□ -2.31
TRAPPC8-203ENST00000577474 USF3Q68DE3 2245 aa0.61□□□□□ -2.31
TRAPPC8-203ENST00000577474 SPTBN1Q01082 2364 aaKnown RBP0.61□□□□□ -2.31
TRAPPC8-203ENST00000577474 MARF1Q9Y4F3 1742 aaKnown RBP0.61□□□□□ -2.31
TRAPPC8-203ENST00000577474 CCDC141Q6ZP82 1450 aa0.61□□□□□ -2.31
TRAPPC8-203ENST00000577474 PAPPAQ13219 1627 aa0.6□□□□□ -2.31
TRAPPC8-203ENST00000577474 GNGT1P63211 74 aa0.6□□□□□ -2.31
TRAPPC8-203ENST00000577474 PYY3Q5JQD4 70 aa0.6□□□□□ -2.31
TRAPPC8-203ENST00000577474 USMG5Q96IX5 58 aa0.6□□□□□ -2.31
TRAPPC8-203ENST00000577474 PTPRQQ9UMZ3 2332 aa0.6□□□□□ -2.31
TRAPPC8-203ENST00000577474 A0A0G2JMZ2 1700 aa0.59□□□□□ -2.31
TRAPPC8-203ENST00000577474 TTC37Q6PGP7 1564 aa0.59□□□□□ -2.31
TRAPPC8-203ENST00000577474 A0A1B0GU69 56 aa0.59□□□□□ -2.31
TRAPPC8-203ENST00000577474 C6orf201Q7Z4U5 140 aa0.59□□□□□ -2.31
TRAPPC8-203ENST00000577474 ATP10BO94823 1461 aa0.59□□□□□ -2.32
TRAPPC8-203ENST00000577474 NRXN1Q9ULB1 1477 aa0.59□□□□□ -2.32
TRAPPC8-203ENST00000577474 NUP188Q5SRE5 1749 aa0.58□□□□□ -2.32
TRAPPC8-203ENST00000577474 URB1O60287 2271 aaKnown RBP0.58□□□□□ -2.32
TRAPPC8-203ENST00000577474 PVALEFA0A1B0GWK0 134 aa0.58□□□□□ -2.32
TRAPPC8-203ENST00000577474 CELSR2Q9HCU4 2923 aa0.58□□□□□ -2.32
TRAPPC8-203ENST00000577474 XRN1Q8IZH2 1706 aaKnown RBP0.58□□□□□ -2.32
TRAPPC8-203ENST00000577474 ANKRD26Q9UPS8 1709 aa0.58□□□□□ -2.32
TRAPPC8-203ENST00000577474 BAZ1AQ9NRL2 1556 aaPredicted RBP0.57□□□□□ -2.32
TRAPPC8-203ENST00000577474 ANKRD17O75179 2603 aaKnown RBP0.57□□□□□ -2.32
TRAPPC8-203ENST00000577474 D6R8Y8 96 aa0.57□□□□□ -2.32
TRAPPC8-203ENST00000577474 MUSTN1Q8IVN3 82 aa0.57□□□□□ -2.32
TRAPPC8-203ENST00000577474 DEFB107AQ8IZN7 70 aa0.57□□□□□ -2.32
TRAPPC8-203ENST00000577474 ANK2Q01484 3957 aa0.57□□□□□ -2.32
TRAPPC8-203ENST00000577474 AKAP12Q02952 1782 aa0.57□□□□□ -2.32
TRAPPC8-203ENST00000577474 EDC4Q6P2E9 1401 aaKnown RBP0.56□□□□□ -2.32
TRAPPC8-203ENST00000577474 NLRP1Q9C000 1473 aa0.56□□□□□ -2.32
TRAPPC8-203ENST00000577474 F8WEM9 126 aa0.56□□□□□ -2.32
TRAPPC8-203ENST00000577474 LEPROTL1O95214 131 aa0.56□□□□□ -2.32
TRAPPC8-203ENST00000577474 COX8AP10176 69 aa0.56□□□□□ -2.32
TRAPPC8-203ENST00000577474 GNG2P59768 71 aa0.56□□□□□ -2.32
TRAPPC8-203ENST00000577474 DEFB109BQ30KR1 87 aa0.56□□□□□ -2.32
TRAPPC8-203ENST00000577474 MUC5ACP98088 5654 aa0.56□□□□□ -2.32
TRAPPC8-203ENST00000577474 PEA15Q15121 130 aa0.55□□□□□ -2.32
TRAPPC8-203ENST00000577474 PSENENQ9NZ42 101 aa0.55□□□□□ -2.32
TRAPPC8-203ENST00000577474 CUX1P39880 1505 aa0.54□□□□□ -2.32
TRAPPC8-203ENST00000577474 SMARCA2P51531 1590 aa0.54□□□□□ -2.32
TRAPPC8-203ENST00000577474 CLTCQ00610 1675 aaKnown RBP0.54□□□□□ -2.32
TRAPPC8-203ENST00000577474 SPRR1AP35321 89 aa0.54□□□□□ -2.32
TRAPPC8-203ENST00000577474 C20orf78Q9BR46 151 aa0.54□□□□□ -2.32
TRAPPC8-203ENST00000577474 SYNE2Q8WXH0 6885 aaKnown RBP0.54□□□□□ -2.32
TRAPPC8-203ENST00000577474 CEP162Q5TB80 1403 aa0.54□□□□□ -2.32
TRAPPC8-203ENST00000577474 K7EQZ3 153 aa0.53□□□□□ -2.32
TRAPPC8-203ENST00000577474 HIGD1BQ9P298 99 aa0.53□□□□□ -2.32
TRAPPC8-203ENST00000577474 RABAC1Q9UI14 185 aa0.53□□□□□ -2.32
TRAPPC8-203ENST00000577474 ZNF292O60281 2723 aa0.52□□□□□ -2.33
TRAPPC8-203ENST00000577474 NCOR2Q9Y618 2525 aa0.52□□□□□ -2.33
TRAPPC8-203ENST00000577474 HMGN2P05204 90 aaKnown RBP0.52□□□□□ -2.33
TRAPPC8-203ENST00000577474 PLIN4Q96Q06 1357 aa0.52□□□□□ -2.33
TRAPPC8-203ENST00000577474 PTPN13Q12923 2485 aa0.52□□□□□ -2.33
TRAPPC8-203ENST00000577474 UNC79Q9P2D8 2635 aa0.51□□□□□ -2.33
TRAPPC8-203ENST00000577474 ABCC3O15438 1527 aa0.5□□□□□ -2.33
TRAPPC8-203ENST00000577474 K7EP34 96 aa0.5□□□□□ -2.33
TRAPPC8-203ENST00000577474 GVINP1Q7Z2Y8 2422 aa0.5□□□□□ -2.33
TRAPPC8-203ENST00000577474 SPRR1BP22528 89 aa0.49□□□□□ -2.33
TRAPPC8-203ENST00000577474 CRIPTQ9P021 101 aa0.49□□□□□ -2.33
TRAPPC8-203ENST00000577474 SHPRHQ149N8 1683 aa0.49□□□□□ -2.33
TRAPPC8-203ENST00000577474 IGSF10Q6WRI0 2623 aa0.49□□□□□ -2.33
TRAPPC8-203ENST00000577474 FSIP2Q5CZC0 6907 aa0.48□□□□□ -2.33
TRAPPC8-203ENST00000577474 PHGR1C9JFL3 82 aa0.48□□□□□ -2.33
TRAPPC8-203ENST00000577474 SPINK4O60575 86 aa0.48□□□□□ -2.33
TRAPPC8-203ENST00000577474 S100A16Q96FQ6 103 aaKnown RBP0.48□□□□□ -2.33
TRAPPC8-203ENST00000577474 UBE2D4Q9Y2X8 147 aa0.48□□□□□ -2.33
TRAPPC8-203ENST00000577474 CHD9Q3L8U1 2897 aa0.48□□□□□ -2.33
TRAPPC8-203ENST00000577474 NCOR1O75376 2440 aa0.48□□□□□ -2.33
TRAPPC8-203ENST00000577474 HIVEP3Q5T1R4 2406 aa0.47□□□□□ -2.33
TRAPPC8-203ENST00000577474 DMBT1Q9UGM3 2413 aaPredicted RBP0.47□□□□□ -2.33
TRAPPC8-203ENST00000577474 KNDC1Q76NI1 1749 aa0.47□□□□□ -2.33
TRAPPC8-203ENST00000577474 PPRC1Q5VV67 1664 aaKnown RBP0.47□□□□□ -2.33
TRAPPC8-203ENST00000577474 TARBP1Q13395 1621 aaKnown RBP0.47□□□□□ -2.33
TRAPPC8-203ENST00000577474 OTOGQ6ZRI0 2925 aa0.47□□□□□ -2.33
TRAPPC8-203ENST00000577474 SNRPFP62306 86 aaKnown RBP0.47□□□□□ -2.33
TRAPPC8-203ENST00000577474 NMSQ5H8A3 153 aa0.47□□□□□ -2.33
TRAPPC8-203ENST00000577474 SAMD9Q5K651 1589 aa0.47□□□□□ -2.33
TRAPPC8-203ENST00000577474 ABCA2Q9BZC7 2435 aa0.47□□□□□ -2.33
TRAPPC8-203ENST00000577474 CYB5AP00167 134 aa0.46□□□□□ -2.34
TRAPPC8-203ENST00000577474 PLGLAQ15195 96 aa0.46□□□□□ -2.34
TRAPPC8-203ENST00000577474 C9orf62Q8N4C0 152 aa0.46□□□□□ -2.34
TRAPPC8-203ENST00000577474 KIAA0556O60303 1618 aa0.46□□□□□ -2.34
TRAPPC8-203ENST00000577474 I3L3M4 83 aa0.45□□□□□ -2.34
TRAPPC8-203ENST00000577474 IGLC3P0DOY3 106 aa0.45□□□□□ -2.34
TRAPPC8-203ENST00000577474 MACF1Q9UPN3 7388 aaKnown RBP0.45□□□□□ -2.34
TRAPPC8-203ENST00000577474 PIEZO2Q9H5I5 2752 aa0.45□□□□□ -2.34
TRAPPC8-203ENST00000577474 CSMD3Q7Z407 3707 aa0.44□□□□□ -2.34
TRAPPC8-203ENST00000577474 IGLC2P0DOY2 106 aa0.44□□□□□ -2.34
TRAPPC8-203ENST00000577474 LRRC37AA6NMS7 1700 aa0.44□□□□□ -2.34
TRAPPC8-203ENST00000577474 KMT2DO14686 5537 aa0.43□□□□□ -2.34
TRAPPC8-203ENST00000577474 SPTA1P02549 2419 aa0.43□□□□□ -2.34
TRAPPC8-203ENST00000577474 SYNE1Q8NF91 8797 aaKnown RBP0.43□□□□□ -2.34
TRAPPC8-203ENST00000577474 RB1CC1Q8TDY2 1594 aa0.42□□□□□ -2.34
TRAPPC8-203ENST00000577474 UACAQ9BZF9 1416 aa0.42□□□□□ -2.34
TRAPPC8-203ENST00000577474 ACYP1P07311 99 aa0.42□□□□□ -2.34
TRAPPC8-203ENST00000577474 LINC00643Q86TS7 51 aa0.42□□□□□ -2.34
TRAPPC8-203ENST00000577474 PAPPA2Q9BXP8 1791 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms