RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-223	ENST00000569784	PAPPA-AS1	Q5QFB9	102 aa		5.24	□□□□□ -1.57
SCAPER-223	ENST00000569784	C10orf25	Q5T742	122 aa		5.24	□□□□□ -1.57
SCAPER-223	ENST00000569784	C6orf48	Q9UBA6	75 aa		5.24	□□□□□ -1.57
SCAPER-223	ENST00000569784	LAMTOR2	Q9Y2Q5	125 aa		5.24	□□□□□ -1.57
SCAPER-223	ENST00000569784	IGLV4-3	A0A075B6K6	122 aa		5.23	□□□□□ -1.57
SCAPER-223	ENST00000569784		A0A1B0GXF2	115 aa		5.23	□□□□□ -1.57
SCAPER-223	ENST00000569784	TLX1NB	P0CAT3	122 aa		5.23	□□□□□ -1.57
SCAPER-223	ENST00000569784	SEC11A	P67812	179 aa		5.23	□□□□□ -1.57
SCAPER-223	ENST00000569784	PNRC1	Q12796	327 aa	Predicted RBP	5.23	□□□□□ -1.57
SCAPER-223	ENST00000569784	C2orf66	Q6UXQ4	117 aa		5.23	□□□□□ -1.57
SCAPER-223	ENST00000569784	CTDSP1	Q9GZU7	261 aa		5.23	□□□□□ -1.57
SCAPER-223	ENST00000569784	GEMIN7	Q9H840	131 aa	Known RBP	5.23	□□□□□ -1.57
SCAPER-223	ENST00000569784	PYGO1	Q9Y3Y4	419 aa		5.23	□□□□□ -1.57
SCAPER-223	ENST00000569784	NDUFC2-KCTD14	E9PQ53	114 aa		5.22	□□□□□ -1.57
SCAPER-223	ENST00000569784		H0Y9J4	135 aa		5.22	□□□□□ -1.57
SCAPER-223	ENST00000569784	LINC00242	Q5T6M2	205 aa		5.22	□□□□□ -1.57
SCAPER-223	ENST00000569784	C2orf82	Q6UX34	121 aa		5.22	□□□□□ -1.57
SCAPER-223	ENST00000569784		Q8N8P6	123 aa		5.22	□□□□□ -1.57
SCAPER-223	ENST00000569784	PRR26	Q8N8Z3	221 aa		5.22	□□□□□ -1.57
SCAPER-223	ENST00000569784	ALKBH7	Q9BT30	221 aa	Predicted RBP	5.22	□□□□□ -1.57
SCAPER-223	ENST00000569784	FAT3	Q8TDW7	4589 aa		5.21	□□□□□ -1.58
SCAPER-223	ENST00000569784		A0A1B0GVG6	124 aa		5.21	□□□□□ -1.58
SCAPER-223	ENST00000569784	LBH	Q53QV2	105 aa	Predicted RBP	5.21	□□□□□ -1.58
SCAPER-223	ENST00000569784	LINC00469	Q8N7U9	141 aa		5.21	□□□□□ -1.58
SCAPER-223	ENST00000569784	NXT2	Q9NPJ8	142 aa	Known RBP	5.21	□□□□□ -1.58
SCAPER-223	ENST00000569784		K7EMI3	77 aa		5.2	□□□□□ -1.58
SCAPER-223	ENST00000569784	RPL13A	P40429	203 aa	Known RBP	5.2	□□□□□ -1.58
SCAPER-223	ENST00000569784	HERVK_113	P63121	156 aa		5.2	□□□□□ -1.58
SCAPER-223	ENST00000569784	LINC01561	Q8N1V8	128 aa		5.2	□□□□□ -1.58
SCAPER-223	ENST00000569784	PKHD1L1	Q86WI1	4243 aa		5.2	□□□□□ -1.58
SCAPER-223	ENST00000569784	IGLV1-50	A0A075B6I6	118 aa		5.19	□□□□□ -1.58
SCAPER-223	ENST00000569784	PRR4	Q16378	134 aa		5.19	□□□□□ -1.58
SCAPER-223	ENST00000569784	ZC2HC1B	Q5TFG8	222 aa		5.19	□□□□□ -1.58
SCAPER-223	ENST00000569784	PRSS47	A8MTI9	375 aa		5.18	□□□□□ -1.58
SCAPER-223	ENST00000569784	NUPR1	O60356	82 aa		5.18	□□□□□ -1.58
SCAPER-223	ENST00000569784	NPS	P0C0P6	89 aa		5.18	□□□□□ -1.58
SCAPER-223	ENST00000569784	S100P	P25815	95 aa		5.18	□□□□□ -1.58
SCAPER-223	ENST00000569784	KIAA0087	Q14695	138 aa		5.18	□□□□□ -1.58
SCAPER-223	ENST00000569784		Q8IZM0	81 aa		5.18	□□□□□ -1.58
SCAPER-223	ENST00000569784	FAM104A	Q969W3	186 aa		5.18	□□□□□ -1.58
SCAPER-223	ENST00000569784	SCGB3A1	Q96QR1	104 aa		5.18	□□□□□ -1.58
SCAPER-223	ENST00000569784	XAGE1A	Q9HD64	81 aa		5.18	□□□□□ -1.58
SCAPER-223	ENST00000569784	HMCN2	Q8NDA2	5059 aa		5.18	□□□□□ -1.58
SCAPER-223	ENST00000569784		F8VRH5	84 aa		5.17	□□□□□ -1.58
SCAPER-223	ENST00000569784	CXCL5	P42830	114 aa		5.17	□□□□□ -1.58
SCAPER-223	ENST00000569784	KRTAP15-1	Q3LI76	137 aa		5.17	□□□□□ -1.58
SCAPER-223	ENST00000569784	C9orf129	Q5T035	196 aa	Known RBP	5.17	□□□□□ -1.58
SCAPER-223	ENST00000569784	AMELX	Q99217	191 aa		5.17	□□□□□ -1.58
SCAPER-223	ENST00000569784	SMCO4	Q9NRQ5	59 aa		5.17	□□□□□ -1.58
SCAPER-223	ENST00000569784	C22orf24	Q9Y442	160 aa		5.17	□□□□□ -1.58
SCAPER-223	ENST00000569784	RPL28	P46779	137 aa	Known RBP	5.16	□□□□□ -1.58
SCAPER-223	ENST00000569784	KIAA1644	Q3SXP7	199 aa		5.16	□□□□□ -1.58
SCAPER-223	ENST00000569784	NKAPP1	Q8N9T2	125 aa		5.16	□□□□□ -1.58
SCAPER-223	ENST00000569784	CDKN2A-AS1	Q9UH64	79 aa		5.16	□□□□□ -1.58
SCAPER-223	ENST00000569784	UBR4	Q5T4S7	5183 aa		5.16	□□□□□ -1.58
SCAPER-223	ENST00000569784	LINC01549	A6NIU2	74 aa		5.15	□□□□□ -1.59
SCAPER-223	ENST00000569784	ZNF861P	O60384	105 aa		5.15	□□□□□ -1.59
SCAPER-223	ENST00000569784	UBE2A	P49459	152 aa		5.15	□□□□□ -1.59
SCAPER-223	ENST00000569784	NDUFA6	P56556	154 aa		5.15	□□□□□ -1.59
SCAPER-223	ENST00000569784	RAB5B	P61020	215 aa		5.15	□□□□□ -1.59
SCAPER-223	ENST00000569784	FA2H	Q7L5A8	372 aa		5.15	□□□□□ -1.59
SCAPER-223	ENST00000569784	MRPL55	Q7Z7F7	128 aa	Known RBP	5.15	□□□□□ -1.59
SCAPER-223	ENST00000569784	KRTAP11-1	Q8IUC1	163 aa		5.15	□□□□□ -1.59
SCAPER-223	ENST00000569784	COX7B2	Q8TF08	81 aa		5.15	□□□□□ -1.59
SCAPER-223	ENST00000569784	TOMM6	Q96B49	74 aa		5.15	□□□□□ -1.59
SCAPER-223	ENST00000569784	TIMM17A	Q99595	171 aa		5.15	□□□□□ -1.59
SCAPER-223	ENST00000569784	IGIP	A6NJ69	53 aa		5.14	□□□□□ -1.59
SCAPER-223	ENST00000569784	RPL37AP8	A6NKH3	93 aa		5.14	□□□□□ -1.59
SCAPER-223	ENST00000569784		H3BRM9	83 aa		5.14	□□□□□ -1.59
SCAPER-223	ENST00000569784	ATP5L	O75964	103 aa		5.14	□□□□□ -1.59
SCAPER-223	ENST00000569784	TSPAN13	O95857	204 aa		5.14	□□□□□ -1.59
SCAPER-223	ENST00000569784	KRTAP5-3	Q6L8H2	238 aa		5.14	□□□□□ -1.59
SCAPER-223	ENST00000569784	LINC00173	Q6ZV60	143 aa		5.14	□□□□□ -1.59
SCAPER-223	ENST00000569784	ERAS	Q7Z444	233 aa		5.14	□□□□□ -1.59
SCAPER-223	ENST00000569784	CARHSP1	Q9Y2V2	147 aa	Known RBP	5.14	□□□□□ -1.59
SCAPER-223	ENST00000569784	GAGE10	A6NGK3	116 aa		5.13	□□□□□ -1.59
SCAPER-223	ENST00000569784	PDZD11	Q5EBL8	140 aa		5.13	□□□□□ -1.59
SCAPER-223	ENST00000569784	TYMSOS	Q8TAI1	123 aa		5.13	□□□□□ -1.59
SCAPER-223	ENST00000569784	TRAV9-1	A0A075B6T8	112 aa		5.12	□□□□□ -1.59
SCAPER-223	ENST00000569784	TINCR	A0A1B0GVN0	87 aa		5.12	□□□□□ -1.59
SCAPER-223	ENST00000569784	BCE1	O60756	84 aa		5.12	□□□□□ -1.59
SCAPER-223	ENST00000569784	SPINK8	P0C7L1	97 aa		5.12	□□□□□ -1.59
SCAPER-223	ENST00000569784	CRYGA	P11844	174 aa		5.12	□□□□□ -1.59
SCAPER-223	ENST00000569784	PMVK	Q15126	192 aa		5.12	□□□□□ -1.59
SCAPER-223	ENST00000569784	FAM19A3	Q7Z5A8	133 aa		5.12	□□□□□ -1.59
SCAPER-223	ENST00000569784	TP73-AS1	Q9UF72	201 aa		5.12	□□□□□ -1.59
SCAPER-223	ENST00000569784		A0A0U1RQV1	116 aa		5.11	□□□□□ -1.59
SCAPER-223	ENST00000569784	SMIM1	B2RUZ4	78 aa		5.11	□□□□□ -1.59
SCAPER-223	ENST00000569784	PFN2	P35080	140 aa		5.11	□□□□□ -1.59
SCAPER-223	ENST00000569784	FABP9	Q0Z7S8	132 aa		5.11	□□□□□ -1.59
SCAPER-223	ENST00000569784	COX19	Q49B96	90 aa		5.11	□□□□□ -1.59
SCAPER-223	ENST00000569784	KRTAP7-1	Q8IUC3	87 aa		5.11	□□□□□ -1.59
SCAPER-223	ENST00000569784	LINC00167	Q96N53	147 aa		5.11	□□□□□ -1.59
SCAPER-223	ENST00000569784	KRTAP1-4	P0C5Y4	121 aa		5.1	□□□□□ -1.59
SCAPER-223	ENST00000569784	CLLU1	Q5K131	121 aa		5.1	□□□□□ -1.59
SCAPER-223	ENST00000569784	UQCC3	Q6UW78	93 aa		5.1	□□□□□ -1.59
SCAPER-223	ENST00000569784	GNB1L	Q9BYB4	327 aa		5.1	□□□□□ -1.59
SCAPER-223	ENST00000569784	CST9L	Q9H4G1	147 aa		5.1	□□□□□ -1.59
SCAPER-223	ENST00000569784	IGKV2-28	A0A075B6P5	120 aa		5.09	□□□□□ -1.59
SCAPER-223	ENST00000569784	IGKV2D-28	P01615	120 aa		5.09	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms