RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 TRAV13-1A0A0B4J241 112 aa4.03□□□□□ -1.76
CDH13-213ENST00000569454 TRBV30A0A0K0K1B3 111 aa4.03□□□□□ -1.76
CDH13-213ENST00000569454 A0A1B0GUV1 79 aa4.03□□□□□ -1.76
CDH13-213ENST00000569454 G3V4G9 280 aa4.03□□□□□ -1.76
CDH13-213ENST00000569454 PRSS2P07478 247 aa4.03□□□□□ -1.76
CDH13-213ENST00000569454 SCGB1C2P0DMR2 95 aa4.03□□□□□ -1.76
CDH13-213ENST00000569454 DEFB130BP0DP73 79 aa4.03□□□□□ -1.76
CDH13-213ENST00000569454 DEFB130AP0DP74 79 aa4.03□□□□□ -1.76
CDH13-213ENST00000569454 PSMB2P49721 201 aa4.03□□□□□ -1.76
CDH13-213ENST00000569454 Q1RN00 199 aa4.03□□□□□ -1.76
CDH13-213ENST00000569454 Q9H8V8 135 aa4.03□□□□□ -1.76
CDH13-213ENST00000569454 ABCA13Q86UQ4 5058 aa4.03□□□□□ -1.76
CDH13-213ENST00000569454 F5H768 121 aa4.02□□□□□ -1.77
CDH13-213ENST00000569454 ATP5G1P05496 136 aa4.02□□□□□ -1.77
CDH13-213ENST00000569454 GYPEP15421 78 aa4.02□□□□□ -1.77
CDH13-213ENST00000569454 DAD1P61803 113 aa4.02□□□□□ -1.77
CDH13-213ENST00000569454 ATXN8Q156A1 80 aa4.02□□□□□ -1.77
CDH13-213ENST00000569454 MRPL23Q16540 153 aaKnown RBP4.02□□□□□ -1.77
CDH13-213ENST00000569454 MEIG1Q5JSS6 88 aa4.02□□□□□ -1.77
CDH13-213ENST00000569454 FAM222AQ5U5X8 452 aa4.02□□□□□ -1.77
CDH13-213ENST00000569454 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.02□□□□□ -1.77
CDH13-213ENST00000569454 ZNF625Q96I27 306 aaPredicted RBP4.02□□□□□ -1.77
CDH13-213ENST00000569454 CDIP1Q9H305 208 aa4.02□□□□□ -1.77
CDH13-213ENST00000569454 PRO0461Q9UI25 63 aa4.02□□□□□ -1.77
CDH13-213ENST00000569454 A0A087WZ39 114 aa4.01□□□□□ -1.77
CDH13-213ENST00000569454 IGHV4-28A0A0C4DH34 117 aa4.01□□□□□ -1.77
CDH13-213ENST00000569454 LOC100131303A0A0U1RQF7 123 aa4.01□□□□□ -1.77
CDH13-213ENST00000569454 SPART-AS1P0CW21 52 aa4.01□□□□□ -1.77
CDH13-213ENST00000569454 CXCL5P42830 114 aa4.01□□□□□ -1.77
CDH13-213ENST00000569454 COX6A2Q02221 97 aa4.01□□□□□ -1.77
CDH13-213ENST00000569454 GAGE6Q13070 117 aa4.01□□□□□ -1.77
CDH13-213ENST00000569454 SS18Q15532 418 aa4.01□□□□□ -1.77
CDH13-213ENST00000569454 DEFB135Q30KP9 77 aa4.01□□□□□ -1.77
CDH13-213ENST00000569454 TEN1Q86WV5 123 aa4.01□□□□□ -1.77
CDH13-213ENST00000569454 LINC00308Q8TCZ7 52 aa4.01□□□□□ -1.77
CDH13-213ENST00000569454 COX7B2Q8TF08 81 aa4.01□□□□□ -1.77
CDH13-213ENST00000569454 LINC01600Q96MT4 127 aa4.01□□□□□ -1.77
CDH13-213ENST00000569454 IGHV3OR16-9A0A0B4J2B5 98 aa4□□□□□ -1.77
CDH13-213ENST00000569454 IBA57-AS1B1ANH7 110 aa4□□□□□ -1.77
CDH13-213ENST00000569454 H3BT86 120 aa4□□□□□ -1.77
CDH13-213ENST00000569454 TCL1BO95988 128 aa4□□□□□ -1.77
CDH13-213ENST00000569454 WFDC2Q14508 124 aa4□□□□□ -1.77
CDH13-213ENST00000569454 ADAMTSL4-AS1Q5T5F5 129 aa4□□□□□ -1.77
CDH13-213ENST00000569454 Q8NAQ8 132 aa4□□□□□ -1.77
CDH13-213ENST00000569454 MUC7Q8TAX7 377 aa4□□□□□ -1.77
CDH13-213ENST00000569454 PPDPFLQ8WWR9 84 aa4□□□□□ -1.77
CDH13-213ENST00000569454 ICOSQ9Y6W8 199 aa4□□□□□ -1.77
CDH13-213ENST00000569454 TRAV13-2A0A0B4J235 113 aa3.99□□□□□ -1.77
CDH13-213ENST00000569454 LINC00959A0A1B0GUT2 108 aa3.99□□□□□ -1.77
CDH13-213ENST00000569454 H3BNG1 76 aa3.99□□□□□ -1.77
CDH13-213ENST00000569454 TRIAP1O43715 76 aa3.99□□□□□ -1.77
CDH13-213ENST00000569454 RPL13AP40429 203 aaKnown RBP3.99□□□□□ -1.77
CDH13-213ENST00000569454 ETDBQ3ZM63 59 aa3.99□□□□□ -1.77
CDH13-213ENST00000569454 LINC01620Q4KN68 170 aa3.99□□□□□ -1.77
CDH13-213ENST00000569454 Q8IZM0 81 aa3.99□□□□□ -1.77
CDH13-213ENST00000569454 TRRAPQ9Y4A5 3859 aa3.98□□□□□ -1.77
CDH13-213ENST00000569454 ANK3Q12955 4377 aaKnown RBP3.98□□□□□ -1.77
CDH13-213ENST00000569454 IGLV4-60A0A075B6I1 120 aa3.98□□□□□ -1.77
CDH13-213ENST00000569454 TRBV10-2A0A0K0K1G8 114 aa3.98□□□□□ -1.77
CDH13-213ENST00000569454 USP17L23D6RBM5 183 aa3.98□□□□□ -1.77
CDH13-213ENST00000569454 TMEM262E9PQX1 116 aa3.98□□□□□ -1.77
CDH13-213ENST00000569454 H7C2G1 150 aa3.98□□□□□ -1.77
CDH13-213ENST00000569454 SLC25A20O43772 301 aa3.98□□□□□ -1.77
CDH13-213ENST00000569454 CRPP02741 224 aa3.98□□□□□ -1.77
CDH13-213ENST00000569454 IGHV4-30-4P0DP06 118 aa3.98□□□□□ -1.77
CDH13-213ENST00000569454 FOXI1Q12951 378 aa3.98□□□□□ -1.77
CDH13-213ENST00000569454 LELP1Q5T871 98 aa3.98□□□□□ -1.77
CDH13-213ENST00000569454 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
CDH13-213ENST00000569454 KRTAP5-3Q6L8H2 238 aa3.98□□□□□ -1.77
CDH13-213ENST00000569454 CARD19Q96LW7 228 aa3.98□□□□□ -1.77
CDH13-213ENST00000569454 C9JAW5 83 aa3.97□□□□□ -1.77
CDH13-213ENST00000569454 LST1O00453 97 aa3.97□□□□□ -1.77
CDH13-213ENST00000569454 COX7A2LO14548 114 aa3.97□□□□□ -1.77
CDH13-213ENST00000569454 VPREB1P12018 145 aa3.97□□□□□ -1.77
CDH13-213ENST00000569454 EGFEM1PQ0D2K5 195 aa3.97□□□□□ -1.77
CDH13-213ENST00000569454 COX17Q14061 63 aa3.97□□□□□ -1.77
CDH13-213ENST00000569454 CD164L2Q6UWJ8 174 aa3.97□□□□□ -1.77
CDH13-213ENST00000569454 ANKRD29Q8N6D5 301 aa3.97□□□□□ -1.77
CDH13-213ENST00000569454 SPATA25Q9BR10 227 aa3.97□□□□□ -1.77
CDH13-213ENST00000569454 C11orf68Q9H3H3 251 aaKnown RBP3.97□□□□□ -1.77
CDH13-213ENST00000569454 TOMM7Q9P0U1 55 aa3.97□□□□□ -1.77
CDH13-213ENST00000569454 V9GYY9 64 aa3.97□□□□□ -1.77
CDH13-213ENST00000569454 NOTCH3Q9UM47 2321 aa3.96□□□□□ -1.77
CDH13-213ENST00000569454 IGKV3OR2-268A0A0C4DH90 116 aa3.96□□□□□ -1.78
CDH13-213ENST00000569454 TRACP01848 142 aa3.96□□□□□ -1.78
CDH13-213ENST00000569454 MIR7-3HGQ8N6C7 128 aa3.96□□□□□ -1.78
CDH13-213ENST00000569454 GAGE12HA6NDE8 117 aa3.95□□□□□ -1.78
CDH13-213ENST00000569454 ANGP03950 147 aaKnown RBP3.95□□□□□ -1.78
CDH13-213ENST00000569454 RPL28P46779 137 aaKnown RBP3.95□□□□□ -1.78
CDH13-213ENST00000569454 XCL1P47992 114 aa3.95□□□□□ -1.78
CDH13-213ENST00000569454 LINC00158P58513 81 aa3.95□□□□□ -1.78
CDH13-213ENST00000569454 CKS1BP61024 79 aa3.95□□□□□ -1.78
CDH13-213ENST00000569454 NPC2P61916 151 aa3.95□□□□□ -1.78
CDH13-213ENST00000569454 REG3AQ06141 175 aa3.95□□□□□ -1.78
CDH13-213ENST00000569454 SOSTDC1Q6X4U4 206 aa3.95□□□□□ -1.78
CDH13-213ENST00000569454 C5orf38Q86SI9 138 aa3.95□□□□□ -1.78
CDH13-213ENST00000569454 C3orf56Q8N813 242 aa3.95□□□□□ -1.78
CDH13-213ENST00000569454 DAND5Q8N907 189 aa3.95□□□□□ -1.78
CDH13-213ENST00000569454 UBE2WQ96B02 151 aa3.95□□□□□ -1.78
CDH13-213ENST00000569454 SND1-IT1Q9HBX3 110 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms