RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 C4orf26Q17RF5 130 aa8.89□□□□□ -0.99
CSPG4P13-202ENST00000567704 ZNF702PQ9H963 129 aa8.89□□□□□ -0.99
CSPG4P13-202ENST00000567704 CYSRT1A8MQ03 144 aa8.89□□□□□ -0.99
CSPG4P13-202ENST00000567704 LINC00482Q8N8I6 264 aa8.89□□□□□ -0.99
CSPG4P13-202ENST00000567704 LINC00315P59091 139 aa8.89□□□□□ -0.99
CSPG4P13-202ENST00000567704 NANOS2P60321 138 aaKnown RBP8.89□□□□□ -0.99
CSPG4P13-202ENST00000567704 SYCNQ0VAF6 134 aa8.89□□□□□ -0.99
CSPG4P13-202ENST00000567704 PMAIP1Q13794 54 aa8.88□□□□□ -0.99
CSPG4P13-202ENST00000567704 CDSNQ15517 529 aa8.88□□□□□ -0.99
CSPG4P13-202ENST00000567704 PRYO14603 147 aa8.88□□□□□ -0.99
CSPG4P13-202ENST00000567704 TRBV10-3A0A0K0K1G6 114 aa8.87□□□□□ -0.99
CSPG4P13-202ENST00000567704 Q6ZVQ6 151 aa8.87□□□□□ -0.99
CSPG4P13-202ENST00000567704 TRBV7-6A0A0J9YX20 115 aa8.87□□□□□ -0.99
CSPG4P13-202ENST00000567704 FHL3Q13643 280 aa8.87□□□□□ -0.99
CSPG4P13-202ENST00000567704 ODF3L2Q3SX64 289 aa8.87□□□□□ -0.99
CSPG4P13-202ENST00000567704 PRO0628Q9UI54 55 aa8.87□□□□□ -0.99
CSPG4P13-202ENST00000567704 TMEM254Q8TBM7 123 aa8.86□□□□□ -0.99
CSPG4P13-202ENST00000567704 PSPHP1O15172 72 aa8.86□□□□□ -0.99
CSPG4P13-202ENST00000567704 IGHV4-31P0DP07 118 aa8.86□□□□□ -0.99
CSPG4P13-202ENST00000567704 AVPP01185 164 aa8.85□□□□□ -0.99
CSPG4P13-202ENST00000567704 RPS28P62857 69 aaKnown RBP8.85□□□□□ -0.99
CSPG4P13-202ENST00000567704 A8MTW9 85 aa8.85□□□□□ -0.99
CSPG4P13-202ENST00000567704 LINC01547P58512 204 aaPredicted RBP8.85□□□□□ -0.99
CSPG4P13-202ENST00000567704 RAI1Q7Z5J4 1906 aaPredicted RBP8.85□□□□□ -0.99
CSPG4P13-202ENST00000567704 JMJD1CQ15652 2540 aa8.85□□□□□ -0.99
CSPG4P13-202ENST00000567704 FAM218AQ96MZ4 157 aa8.84□□□□□ -0.99
CSPG4P13-202ENST00000567704 RPL37AP8A6NKH3 93 aa8.84□□□□□ -0.99
CSPG4P13-202ENST00000567704 B9D2Q9BPU9 175 aa8.83□□□□□ -1
CSPG4P13-202ENST00000567704 IGLV5-39A0A0G2JS06 123 aa8.83□□□□□ -1
CSPG4P13-202ENST00000567704 DHRS4-AS1Q9P1J3 65 aa8.83□□□□□ -1
CSPG4P13-202ENST00000567704 LINC00208Q96KT6 92 aa8.83□□□□□ -1
CSPG4P13-202ENST00000567704 BEAN1Q3B7T3 259 aa8.82□□□□□ -1
CSPG4P13-202ENST00000567704 NHLRC4P0CG21 123 aaPredicted RBP8.82□□□□□ -1
CSPG4P13-202ENST00000567704 ANKRD11Q6UB99 2663 aaPredicted RBP8.81□□□□□ -1
CSPG4P13-202ENST00000567704 LINC00575Q6W349 94 aa8.81□□□□□ -1
CSPG4P13-202ENST00000567704 LELP1Q5T871 98 aa8.81□□□□□ -1
CSPG4P13-202ENST00000567704 MUC7Q8TAX7 377 aa8.81□□□□□ -1
CSPG4P13-202ENST00000567704 PRR15LQ9BU68 103 aa8.8□□□□□ -1
CSPG4P13-202ENST00000567704 ZFYVE26Q68DK2 2539 aa8.8□□□□□ -1
CSPG4P13-202ENST00000567704 Q8N9L7 120 aa8.79□□□□□ -1
CSPG4P13-202ENST00000567704 LINC01006Q8NI28 216 aa8.79□□□□□ -1
CSPG4P13-202ENST00000567704 C11orf45Q8TAV5 145 aa8.79□□□□□ -1
CSPG4P13-202ENST00000567704 ESRGQ1W209 222 aa8.79□□□□□ -1
CSPG4P13-202ENST00000567704 C1orf137Q5JT78 98 aa8.79□□□□□ -1
CSPG4P13-202ENST00000567704 Q9UF83 564 aa8.79□□□□□ -1
CSPG4P13-202ENST00000567704 CHD7Q9P2D1 2997 aa8.78□□□□□ -1
CSPG4P13-202ENST00000567704 DEFB131BA0A096LNP1 70 aa8.78□□□□□ -1
CSPG4P13-202ENST00000567704 A0A1W2PPR1 153 aa8.78□□□□□ -1
CSPG4P13-202ENST00000567704 C6orf223Q8N319 242 aa8.78□□□□□ -1
CSPG4P13-202ENST00000567704 SEC61GP60059 68 aa8.77□□□□□ -1.01
CSPG4P13-202ENST00000567704 FHL2Q14192 279 aa8.77□□□□□ -1.01
CSPG4P13-202ENST00000567704 CHD9Q3L8U1 2897 aa8.77□□□□□ -1.01
CSPG4P13-202ENST00000567704 RETNQ9HD89 108 aa8.77□□□□□ -1.01
CSPG4P13-202ENST00000567704 BRI3O95415 125 aa8.76□□□□□ -1.01
CSPG4P13-202ENST00000567704 FAM19A4Q96LR4 140 aa8.76□□□□□ -1.01
CSPG4P13-202ENST00000567704 SMCR5Q8TEV8 140 aa8.75□□□□□ -1.01
CSPG4P13-202ENST00000567704 KPRPQ5T749 579 aaPredicted RBP8.75□□□□□ -1.01
CSPG4P13-202ENST00000567704 MUC4Q99102 2169 aa8.75□□□□□ -1.01
CSPG4P13-202ENST00000567704 CXCL6P80162 114 aa8.74□□□□□ -1.01
CSPG4P13-202ENST00000567704 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.74□□□□□ -1.01
CSPG4P13-202ENST00000567704 EGFEM1PQ0D2K5 195 aa8.74□□□□□ -1.01
CSPG4P13-202ENST00000567704 CASC2Q6XLA1 102 aa8.74□□□□□ -1.01
CSPG4P13-202ENST00000567704 IGHV3OR16-9A0A0B4J2B5 98 aa8.74□□□□□ -1.01
CSPG4P13-202ENST00000567704 PLA2G2AP14555 144 aa8.73□□□□□ -1.01
CSPG4P13-202ENST00000567704 LITAFQ99732 161 aa8.73□□□□□ -1.01
CSPG4P13-202ENST00000567704 MTORP42345 2549 aa8.73□□□□□ -1.01
CSPG4P13-202ENST00000567704 IGLV5-45A0A087WSX0 123 aa8.73□□□□□ -1.01
CSPG4P13-202ENST00000567704 C11orf72Q8NBR9 251 aa8.72□□□□□ -1.01
CSPG4P13-202ENST00000567704 A0A0C4DFX4 3053 aa8.71□□□□□ -1.01
CSPG4P13-202ENST00000567704 SPINK6Q6UWN8 80 aa8.71□□□□□ -1.01
CSPG4P13-202ENST00000567704 SPATA3Q8NHX4 192 aa8.71□□□□□ -1.01
CSPG4P13-202ENST00000567704 RANBP2P49792 3224 aaKnown RBP8.71□□□□□ -1.01
CSPG4P13-202ENST00000567704 A0A1B0GUV1 79 aa8.7□□□□□ -1.02
CSPG4P13-202ENST00000567704 IGHV4-30-4P0DP06 118 aa8.7□□□□□ -1.02
CSPG4P13-202ENST00000567704 DEFB116Q30KQ4 102 aa8.7□□□□□ -1.02
CSPG4P13-202ENST00000567704 TRAV10A0A0B4J240 114 aa8.69□□□□□ -1.02
CSPG4P13-202ENST00000567704 MKI67P46013 3256 aaKnown RBP8.69□□□□□ -1.02
CSPG4P13-202ENST00000567704 C14orf177Q52M58 125 aa8.68□□□□□ -1.02
CSPG4P13-202ENST00000567704 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.68□□□□□ -1.02
CSPG4P13-202ENST00000567704 BCE1O60756 84 aa8.68□□□□□ -1.02
CSPG4P13-202ENST00000567704 EIF4EBP3O60516 100 aaPredicted RBP8.68□□□□□ -1.02
CSPG4P13-202ENST00000567704 PCOTHQ58A44 107 aa8.68□□□□□ -1.02
CSPG4P13-202ENST00000567704 SPTBN4Q9H254 2564 aa8.67□□□□□ -1.02
CSPG4P13-202ENST00000567704 TRANK1O15050 2925 aa8.67□□□□□ -1.02
CSPG4P13-202ENST00000567704 C4orf48Q5BLP8 95 aa8.67□□□□□ -1.02
CSPG4P13-202ENST00000567704 SMIM29Q86T20 159 aa8.66□□□□□ -1.02
CSPG4P13-202ENST00000567704 A0A087WSZ3 146 aa8.66□□□□□ -1.02
CSPG4P13-202ENST00000567704 TM2D3Q9BRN9 247 aa8.66□□□□□ -1.02
CSPG4P13-202ENST00000567704 POLQO75417 2590 aa8.66□□□□□ -1.02
CSPG4P13-202ENST00000567704 IGLV1-51P01701 117 aa8.66□□□□□ -1.02
CSPG4P13-202ENST00000567704 H0Y9P7 68 aa8.65□□□□□ -1.02
CSPG4P13-202ENST00000567704 LINC01561Q8N1V8 128 aa8.65□□□□□ -1.02
CSPG4P13-202ENST00000567704 C10orf25Q5T742 122 aa8.65□□□□□ -1.03
CSPG4P13-202ENST00000567704 CHD8Q9HCK8 2581 aa8.65□□□□□ -1.03
CSPG4P13-202ENST00000567704 Q6ZQT0 140 aa8.64□□□□□ -1.03
CSPG4P13-202ENST00000567704 IGLV9-49A0A0B4J1Y8 123 aa8.64□□□□□ -1.03
CSPG4P13-202ENST00000567704 HCG22E2RYF7 251 aa8.64□□□□□ -1.03
CSPG4P13-202ENST00000567704 BRCA2P51587 3418 aa8.63□□□□□ -1.03
CSPG4P13-202ENST00000567704 LRRK2Q5S007 2527 aa8.61□□□□□ -1.03
CSPG4P13-202ENST00000567704 Q6ZRU5 148 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms