RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 NDUFV3P56181 108 aaKnown RBP7.63□□□□□ -1.19
USP3-218ENST00000560202 TTC32Q5I0X7 151 aa7.63□□□□□ -1.19
USP3-218ENST00000560202 FAM19A3Q7Z5A8 133 aa7.63□□□□□ -1.19
USP3-218ENST00000560202 LINC00269Q8N2A0 174 aa7.63□□□□□ -1.19
USP3-218ENST00000560202 PRO1854Q9UHT4 67 aa7.63□□□□□ -1.19
USP3-218ENST00000560202 PLECQ15149 4684 aaKnown RBP7.63□□□□□ -1.19
USP3-218ENST00000560202 LINC00242Q5T6M2 205 aa7.63□□□□□ -1.19
USP3-218ENST00000560202 LINC00959A0A1B0GUT2 108 aa7.62□□□□□ -1.19
USP3-218ENST00000560202 TCL1BO95988 128 aa7.62□□□□□ -1.19
USP3-218ENST00000560202 ZNF22P17026 224 aaPredicted RBP7.62□□□□□ -1.19
USP3-218ENST00000560202 REG3AQ06141 175 aa7.62□□□□□ -1.19
USP3-218ENST00000560202 LINC01556Q5JQF7 62 aa7.62□□□□□ -1.19
USP3-218ENST00000560202 TMEM170BQ5T4T1 132 aa7.62□□□□□ -1.19
USP3-218ENST00000560202 CLPSL2Q6UWE3 100 aa7.62□□□□□ -1.19
USP3-218ENST00000560202 ANKRD29Q8N6D5 301 aa7.62□□□□□ -1.19
USP3-218ENST00000560202 UPK3BQ9BT76 320 aa7.62□□□□□ -1.19
USP3-218ENST00000560202 SPANXCQ9NY87 97 aa7.62□□□□□ -1.19
USP3-218ENST00000560202 SS18L2Q9UHA2 77 aa7.62□□□□□ -1.19
USP3-218ENST00000560202 KLK12Q9UKR0 248 aa7.62□□□□□ -1.19
USP3-218ENST00000560202 CSMD3Q7Z407 3707 aa7.62□□□□□ -1.19
USP3-218ENST00000560202 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.61□□□□□ -1.19
USP3-218ENST00000560202 A0A0B4J2C4 111 aa7.61□□□□□ -1.19
USP3-218ENST00000560202 SLC25A20O43772 301 aa7.61□□□□□ -1.19
USP3-218ENST00000560202 DNAH10OSP0CZ25 163 aa7.61□□□□□ -1.19
USP3-218ENST00000560202 HERVK_113P63121 156 aa7.61□□□□□ -1.19
USP3-218ENST00000560202 COX6A2Q02221 97 aa7.61□□□□□ -1.19
USP3-218ENST00000560202 MUC7Q8TAX7 377 aa7.61□□□□□ -1.19
USP3-218ENST00000560202 SS18Q15532 418 aa7.6□□□□□ -1.19
USP3-218ENST00000560202 WWC2-AS2Q96NR7 200 aa7.6□□□□□ -1.19
USP3-218ENST00000560202 TMEM126AQ9H061 195 aa7.6□□□□□ -1.19
USP3-218ENST00000560202 PRR34Q9NV39 138 aa7.6□□□□□ -1.19
USP3-218ENST00000560202 STARD9Q9P2P6 4700 aa7.6□□□□□ -1.19
USP3-218ENST00000560202 IGLV5-45A0A087WSX0 123 aa7.6□□□□□ -1.19
USP3-218ENST00000560202 FAM240AA0A1B0GVK7 77 aa7.6□□□□□ -1.19
USP3-218ENST00000560202 B5MCH6 92 aa7.6□□□□□ -1.19
USP3-218ENST00000560202 ATXN8Q156A1 80 aa7.6□□□□□ -1.19
USP3-218ENST00000560202 TMEM223A0PJW6 202 aa7.59□□□□□ -1.19
USP3-218ENST00000560202 ENHOQ6UWT2 76 aa7.59□□□□□ -1.19
USP3-218ENST00000560202 UBE2DNLQ8IWF7 75 aa7.59□□□□□ -1.19
USP3-218ENST00000560202 CDKN2A-AS1Q9UH64 79 aa7.59□□□□□ -1.19
USP3-218ENST00000560202 CRPP02741 224 aa7.58□□□□□ -1.2
USP3-218ENST00000560202 CFC1BP0CG36 223 aa7.58□□□□□ -1.2
USP3-218ENST00000560202 CFC1P0CG37 223 aa7.58□□□□□ -1.2
USP3-218ENST00000560202 UBE2WQ96B02 151 aa7.58□□□□□ -1.2
USP3-218ENST00000560202 Q9H8V8 135 aa7.58□□□□□ -1.2
USP3-218ENST00000560202 TGP01266 2768 aa7.58□□□□□ -1.2
USP3-218ENST00000560202 IGLV10-54A0A075B6I4 117 aa7.57□□□□□ -1.2
USP3-218ENST00000560202 IGHV3OR16-9A0A0B4J2B5 98 aa7.57□□□□□ -1.2
USP3-218ENST00000560202 XCL1P47992 114 aa7.57□□□□□ -1.2
USP3-218ENST00000560202 TRAV8-4A0A0B4J246 113 aa7.57□□□□□ -1.2
USP3-218ENST00000560202 CHCHD10Q8WYQ3 142 aaPredicted RBP7.57□□□□□ -1.2
USP3-218ENST00000560202 TRBV30A0A0K0K1B3 111 aa7.56□□□□□ -1.2
USP3-218ENST00000560202 TRBV10-2A0A0K0K1G8 114 aa7.56□□□□□ -1.2
USP3-218ENST00000560202 C9JAW5 83 aa7.56□□□□□ -1.2
USP3-218ENST00000560202 H3BT86 120 aa7.56□□□□□ -1.2
USP3-218ENST00000560202 MIAQ16674 131 aa7.56□□□□□ -1.2
USP3-218ENST00000560202 CD164L2Q6UWJ8 174 aa7.56□□□□□ -1.2
USP3-218ENST00000560202 PLEKHB2Q96CS7 222 aa7.56□□□□□ -1.2
USP3-218ENST00000560202 IMUPQ9GZP8 106 aa7.56□□□□□ -1.2
USP3-218ENST00000560202 IGHV3-64A0A075B6Q5 118 aa7.55□□□□□ -1.2
USP3-218ENST00000560202 TRAV8-3A0A0A6YYJ7 113 aa7.55□□□□□ -1.2
USP3-218ENST00000560202 LGALS3P17931 250 aaKnown RBP7.55□□□□□ -1.2
USP3-218ENST00000560202 C5orf38Q86SI9 138 aa7.55□□□□□ -1.2
USP3-218ENST00000560202 DNAH1Q9P2D7 4330 aa7.55□□□□□ -1.2
USP3-218ENST00000560202 A0A087WZ39 114 aa7.54□□□□□ -1.2
USP3-218ENST00000560202 IGHV1-58A0A0C4DH39 117 aa7.54□□□□□ -1.2
USP3-218ENST00000560202 IBA57-AS1B1ANH7 110 aa7.54□□□□□ -1.2
USP3-218ENST00000560202 LEPROTO15243 131 aa7.54□□□□□ -1.2
USP3-218ENST00000560202 ACYP1P07311 99 aa7.54□□□□□ -1.2
USP3-218ENST00000560202 LINC01620Q4KN68 170 aa7.54□□□□□ -1.2
USP3-218ENST00000560202 SMIM1B2RUZ4 78 aa7.54□□□□□ -1.2
USP3-218ENST00000560202 VPS13DQ5THJ4 4388 aa7.53□□□□□ -1.2
USP3-218ENST00000560202 LYSTQ99698 3801 aa7.53□□□□□ -1.2
USP3-218ENST00000560202 IGLV5-39A0A0G2JS06 123 aa7.53□□□□□ -1.2
USP3-218ENST00000560202 TRBV7-7A0A0K0K1E9 115 aa7.53□□□□□ -1.2
USP3-218ENST00000560202 J3QQQ9 107 aa7.53□□□□□ -1.2
USP3-218ENST00000560202 COX7A2LO14548 114 aa7.53□□□□□ -1.2
USP3-218ENST00000560202 COX6CP09669 75 aa7.53□□□□□ -1.2
USP3-218ENST00000560202 TSPEAR-AS2P59090 65 aa7.53□□□□□ -1.2
USP3-218ENST00000560202 HERV-K104P63124 156 aa7.53□□□□□ -1.2
USP3-218ENST00000560202 TENM2Q9NT68 2774 aa7.52□□□□□ -1.21
USP3-218ENST00000560202 CASC10Q5T4H9 136 aa7.52□□□□□ -1.21
USP3-218ENST00000560202 LINC01561Q8N1V8 128 aa7.52□□□□□ -1.21
USP3-218ENST00000560202 NTN5Q8WTR8 489 aaPredicted RBP7.52□□□□□ -1.21
USP3-218ENST00000560202 C3orf84H3BNL1 204 aa7.51□□□□□ -1.21
USP3-218ENST00000560202 KRTAP26-1Q6PEX3 210 aa7.51□□□□□ -1.21
USP3-218ENST00000560202 C1orf43Q9BWL3 253 aa7.51□□□□□ -1.21
USP3-218ENST00000560202 Q9HAA7 133 aa7.51□□□□□ -1.21
USP3-218ENST00000560202 IGKV2D-24A0A075B6R9 120 aa7.51□□□□□ -1.21
USP3-218ENST00000560202 A4D1N5 150 aa7.51□□□□□ -1.21
USP3-218ENST00000560202 CCDC179H3BU77 68 aa7.51□□□□□ -1.21
USP3-218ENST00000560202 MALP21145 153 aa7.51□□□□□ -1.21
USP3-218ENST00000560202 SMIM20Q8N5G0 67 aa7.51□□□□□ -1.21
USP3-218ENST00000560202 KRTAP1-5Q9BYS1 174 aa7.5□□□□□ -1.21
USP3-218ENST00000560202 MEIG1Q5JSS6 88 aa7.49□□□□□ -1.21
USP3-218ENST00000560202 SFTA2Q6UW10 78 aa7.49□□□□□ -1.21
USP3-218ENST00000560202 NBDYA0A0U1RRE5 68 aa7.48□□□□□ -1.21
USP3-218ENST00000560202 C2orf82Q6UX34 121 aa7.48□□□□□ -1.21
USP3-218ENST00000560202 COX7B2Q8TF08 81 aa7.48□□□□□ -1.21
USP3-218ENST00000560202 RMI2Q96E14 147 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms