RNA–Protein interactions for RNA: ENST00000559578.1

PBX1-217, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-217ENST00000559578 K7EMI3 77 aa14.21□□□□□ -0.13
PBX1-217ENST00000559578 FAM19A3Q7Z5A8 133 aa14.21□□□□□ -0.13
PBX1-217ENST00000559578 CTDSP1Q9GZU7 261 aa14.21□□□□□ -0.13
PBX1-217ENST00000559578 NXT2Q9NPJ8 142 aaKnown RBP14.21□□□□□ -0.13
PBX1-217ENST00000559578 HERVK_113P63121 156 aa14.19□□□□□ -0.14
PBX1-217ENST00000559578 SEC11AP67812 179 aa14.19□□□□□ -0.14
PBX1-217ENST00000559578 GEMIN7Q9H840 131 aaKnown RBP14.19□□□□□ -0.14
PBX1-217ENST00000559578 CDKN2A-AS1Q9UH64 79 aa14.19□□□□□ -0.14
PBX1-217ENST00000559578 TSPAN13O95857 204 aa14.18□□□□□ -0.14
PBX1-217ENST00000559578 PAPPA-AS1Q5QFB9 102 aa14.18□□□□□ -0.14
PBX1-217ENST00000559578 TP73-AS1Q9UF72 201 aa14.18□□□□□ -0.14
PBX1-217ENST00000559578 A0A0U1RQV1 116 aa14.17□□□□□ -0.14
PBX1-217ENST00000559578 F8VRH5 84 aa14.17□□□□□ -0.14
PBX1-217ENST00000559578 RPL28P46779 137 aaKnown RBP14.17□□□□□ -0.14
PBX1-217ENST00000559578 RAB14P61106 215 aa14.17□□□□□ -0.14
PBX1-217ENST00000559578 MRPL55Q7Z7F7 128 aaKnown RBP14.17□□□□□ -0.14
PBX1-217ENST00000559578 G0S2P27469 103 aa14.15□□□□□ -0.14
PBX1-217ENST00000559578 CXCL5P42830 114 aa14.15□□□□□ -0.14
PBX1-217ENST00000559578 KIAA1644Q3SXP7 199 aa14.15□□□□□ -0.14
PBX1-217ENST00000559578 TIMM17AQ99595 171 aa14.15□□□□□ -0.14
PBX1-217ENST00000559578 BCE1O60756 84 aa14.14□□□□□ -0.15
PBX1-217ENST00000559578 TOMM6Q96B49 74 aa14.14□□□□□ -0.15
PBX1-217ENST00000559578 MUC2Q02817 5179 aa14.13□□□□□ -0.15
PBX1-217ENST00000559578 CRYGAP11844 174 aa14.13□□□□□ -0.15
PBX1-217ENST00000559578 A0A087X002 238 aa14.12□□□□□ -0.15
PBX1-217ENST00000559578 TYMSOSQ8TAI1 123 aa14.11□□□□□ -0.15
PBX1-217ENST00000559578 SCGB3A1Q96QR1 104 aa14.11□□□□□ -0.15
PBX1-217ENST00000559578 ERASQ7Z444 233 aa14.1□□□□□ -0.15
PBX1-217ENST00000559578 LINC00167Q96N53 147 aa14.09□□□□□ -0.15
PBX1-217ENST00000559578 RPL37AP8A6NKH3 93 aa14.08□□□□□ -0.16
PBX1-217ENST00000559578 SMIM1B2RUZ4 78 aa14.08□□□□□ -0.16
PBX1-217ENST00000559578 ADCYAP1P18509 176 aa14.07□□□□□ -0.16
PBX1-217ENST00000559578 COX7B2Q8TF08 81 aa14.07□□□□□ -0.16
PBX1-217ENST00000559578 PDZD11Q5EBL8 140 aa14.06□□□□□ -0.16
PBX1-217ENST00000559578 TINCRA0A1B0GVN0 87 aa14.05□□□□□ -0.16
PBX1-217ENST00000559578 GAGE10A6NGK3 116 aa14.04□□□□□ -0.16
PBX1-217ENST00000559578 SPINK8P0C7L1 97 aa14.02□□□□□ -0.17
PBX1-217ENST00000559578 UBE2AP49459 152 aa14.02□□□□□ -0.17
PBX1-217ENST00000559578 RAB5BP61020 215 aa14.02□□□□□ -0.17
PBX1-217ENST00000559578 TRAV9-1A0A075B6T8 112 aa14.01□□□□□ -0.17
PBX1-217ENST00000559578 IGLV5-45A0A087WSX0 123 aa14.01□□□□□ -0.17
PBX1-217ENST00000559578 CLLU1Q5K131 121 aa14.01□□□□□ -0.17
PBX1-217ENST00000559578 NKAPP1Q8N9T2 125 aa14.01□□□□□ -0.17
PBX1-217ENST00000559578 CST9LQ9H4G1 147 aa14.01□□□□□ -0.17
PBX1-217ENST00000559578 ANAPC11Q9NYG5 84 aa14.01□□□□□ -0.17
PBX1-217ENST00000559578 IGLV5-37A0A075B6J1 123 aa14□□□□□ -0.17
PBX1-217ENST00000559578 LINC01549A6NIU2 74 aa13.99□□□□□ -0.17
PBX1-217ENST00000559578 GNB1LQ9BYB4 327 aa13.98□□□□□ -0.17
PBX1-217ENST00000559578 TMEM218A2RU14 115 aa13.97□□□□□ -0.17
PBX1-217ENST00000559578 LINC01546A6NGU7 62 aa13.97□□□□□ -0.17
PBX1-217ENST00000559578 S100PP25815 95 aa13.97□□□□□ -0.17
PBX1-217ENST00000559578 PMVKQ15126 192 aa13.97□□□□□ -0.17
PBX1-217ENST00000559578 FAM229BQ4G0N7 80 aa13.97□□□□□ -0.17
PBX1-217ENST00000559578 KRTAP13-2Q52LG2 175 aa13.97□□□□□ -0.17
PBX1-217ENST00000559578 KRTAP13-1Q8IUC0 172 aa13.97□□□□□ -0.17
PBX1-217ENST00000559578 FA2HQ7L5A8 372 aa13.96□□□□□ -0.17
PBX1-217ENST00000559578 SMCO4Q9NRQ5 59 aa13.96□□□□□ -0.17
PBX1-217ENST00000559578 UQCC3Q6UW78 93 aa13.95□□□□□ -0.18
PBX1-217ENST00000559578 LINC00304Q8N9R0 145 aa13.95□□□□□ -0.18
PBX1-217ENST00000559578 ATP5LO75964 103 aa13.94□□□□□ -0.18
PBX1-217ENST00000559578 MRPL18Q9H0U6 180 aaKnown RBP13.94□□□□□ -0.18
PBX1-217ENST00000559578 IGKV2-28A0A075B6P5 120 aa13.93□□□□□ -0.18
PBX1-217ENST00000559578 H3BRM9 83 aa13.93□□□□□ -0.18
PBX1-217ENST00000559578 IGKV2D-28P01615 120 aa13.93□□□□□ -0.18
PBX1-217ENST00000559578 RETNLBQ9BQ08 111 aa13.93□□□□□ -0.18
PBX1-217ENST00000559578 KRTAP9-2Q9BYQ4 174 aa13.92□□□□□ -0.18
PBX1-217ENST00000559578 IGKV2D-26A0A0A0MRZ7 120 aa13.91□□□□□ -0.18
PBX1-217ENST00000559578 SCO1O75880 301 aa13.91□□□□□ -0.18
PBX1-217ENST00000559578 FABP9Q0Z7S8 132 aa13.91□□□□□ -0.18
PBX1-217ENST00000559578 PFN2P35080 140 aa13.9□□□□□ -0.18
PBX1-217ENST00000559578 NDUFA6P56556 154 aa13.9□□□□□ -0.18
PBX1-217ENST00000559578 COX19Q49B96 90 aa13.9□□□□□ -0.18
PBX1-217ENST00000559578 SEC11CQ9BY50 192 aa13.9□□□□□ -0.18
PBX1-217ENST00000559578 PRLHP81277 87 aa13.88□□□□□ -0.19
PBX1-217ENST00000559578 CDIP1Q9H305 208 aa13.88□□□□□ -0.19
PBX1-217ENST00000559578 IGLC3P0DOY3 106 aa13.87□□□□□ -0.19
PBX1-217ENST00000559578 FAM19A1Q7Z5A9 133 aa13.87□□□□□ -0.19
PBX1-217ENST00000559578 LCE2AQ5TA79 106 aaPredicted RBP13.86□□□□□ -0.19
PBX1-217ENST00000559578 CTAG1AP78358 180 aa13.85□□□□□ -0.19
PBX1-217ENST00000559578 TPRXLQ17RH7 258 aa13.85□□□□□ -0.19
PBX1-217ENST00000559578 IGLV7-46A0A075B6I9 117 aa13.84□□□□□ -0.19
PBX1-217ENST00000559578 IGLV5-39A0A0G2JS06 123 aa13.84□□□□□ -0.19
PBX1-217ENST00000559578 ZNF22P17026 224 aaPredicted RBP13.84□□□□□ -0.19
PBX1-217ENST00000559578 RPL24P83731 157 aaKnown RBP13.84□□□□□ -0.19
PBX1-217ENST00000559578 IFITM2Q01629 132 aa13.84□□□□□ -0.19
PBX1-217ENST00000559578 TMEM126AQ9H061 195 aa13.84□□□□□ -0.19
PBX1-217ENST00000559578 SND1-IT1Q9HBX3 110 aa13.83□□□□□ -0.2
PBX1-217ENST00000559578 ERG28Q9UKR5 140 aa13.83□□□□□ -0.2
PBX1-217ENST00000559578 A0A096LNJ9 63 aa13.82□□□□□ -0.2
PBX1-217ENST00000559578 TMEM238C9JI98 176 aa13.82□□□□□ -0.2
PBX1-217ENST00000559578 VPREB1P12018 145 aa13.82□□□□□ -0.2
PBX1-217ENST00000559578 ZNF625Q96I27 306 aaPredicted RBP13.82□□□□□ -0.2
PBX1-217ENST00000559578 RPS10P5Q9NQ39 176 aa13.82□□□□□ -0.2
PBX1-217ENST00000559578 COX17Q14061 63 aa13.8□□□□□ -0.2
PBX1-217ENST00000559578 COMMD7Q86VX2 200 aa13.8□□□□□ -0.2
PBX1-217ENST00000559578 PMCHL1Q16048 86 aa13.79□□□□□ -0.2
PBX1-217ENST00000559578 URB1-AS1Q96HZ7 61 aa13.79□□□□□ -0.2
PBX1-217ENST00000559578 M0R378 163 aa13.78□□□□□ -0.2
PBX1-217ENST00000559578 HBDP02042 147 aa13.78□□□□□ -0.2
PBX1-217ENST00000559578 LINC00614P0C842 121 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms