RNA–Protein interactions for RNA: ENST00000559432.5

CRNDE-206, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 3 BASIC

Gene CRNDE, Length 587 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-206ENST00000559432 HERVK_113P63121 156 aa15.48■□□□□ 0.07
CRNDE-206ENST00000559432 TOMM6Q96B49 74 aa15.48■□□□□ 0.07
CRNDE-206ENST00000559432 NDUFC2-KCTD14E9PQ53 114 aa15.47■□□□□ 0.07
CRNDE-206ENST00000559432 C6orf226Q5I0X4 101 aa15.47■□□□□ 0.07
CRNDE-206ENST00000559432 GEMIN7Q9H840 131 aaKnown RBP15.47■□□□□ 0.07
CRNDE-206ENST00000559432 KRTAP10-8P60410 259 aa15.45■□□□□ 0.06
CRNDE-206ENST00000559432 LINC01546A6NGU7 62 aa15.44■□□□□ 0.06
CRNDE-206ENST00000559432 ERASQ7Z444 233 aa15.44■□□□□ 0.06
CRNDE-206ENST00000559432 Q8IZM0 81 aa15.44■□□□□ 0.06
CRNDE-206ENST00000559432 SCGB3A1Q96QR1 104 aa15.44■□□□□ 0.06
CRNDE-206ENST00000559432 M0QXV9 152 aa15.43■□□□□ 0.06
CRNDE-206ENST00000559432 CDKN2A-AS1Q9UH64 79 aa15.43■□□□□ 0.06
CRNDE-206ENST00000559432 TRAPPC1Q9Y5R8 145 aa15.43■□□□□ 0.06
CRNDE-206ENST00000559432 TNXBP22105 4242 aa15.42■□□□□ 0.06
CRNDE-206ENST00000559432 IGLV7-43P04211 117 aa15.42■□□□□ 0.06
CRNDE-206ENST00000559432 LINC01549A6NIU2 74 aa15.41■□□□□ 0.06
CRNDE-206ENST00000559432 UBE2BP63146 152 aa15.41■□□□□ 0.06
CRNDE-206ENST00000559432 SLC7A5P1Q8MH63 180 aa15.4■□□□□ 0.06
CRNDE-206ENST00000559432 C9orf129Q5T035 196 aaKnown RBP15.39■□□□□ 0.05
CRNDE-206ENST00000559432 DIRC1Q969H9 104 aa15.39■□□□□ 0.05
CRNDE-206ENST00000559432 YPEL4Q96NS1 127 aa15.39■□□□□ 0.05
CRNDE-206ENST00000559432 ODF1Q14990 250 aa15.38■□□□□ 0.05
CRNDE-206ENST00000559432 FA2HQ7L5A8 372 aa15.38■□□□□ 0.05
CRNDE-206ENST00000559432 KRTAP11-1Q8IUC1 163 aa15.38■□□□□ 0.05
CRNDE-206ENST00000559432 KRTAP7-1Q8IUC3 87 aa15.38■□□□□ 0.05
CRNDE-206ENST00000559432 LINC00469Q8N7U9 141 aa15.38■□□□□ 0.05
CRNDE-206ENST00000559432 F8VRH5 84 aa15.36■□□□□ 0.05
CRNDE-206ENST00000559432 SMCO4Q9NRQ5 59 aa15.36■□□□□ 0.05
CRNDE-206ENST00000559432 TINCRA0A1B0GVN0 87 aa15.35■□□□□ 0.05
CRNDE-206ENST00000559432 CXCL5P42830 114 aa15.35■□□□□ 0.05
CRNDE-206ENST00000559432 C18orf32Q8TCD1 76 aa15.35■□□□□ 0.05
CRNDE-206ENST00000559432 URB1-AS1Q96HZ7 61 aa15.33■□□□□ 0.04
CRNDE-206ENST00000559432 SMIM1B2RUZ4 78 aa15.32■□□□□ 0.04
CRNDE-206ENST00000559432 CST9LQ9H4G1 147 aa15.32■□□□□ 0.04
CRNDE-206ENST00000559432 UBR4Q5T4S7 5183 aa15.31■□□□□ 0.04
CRNDE-206ENST00000559432 H0Y9J4 135 aa15.31■□□□□ 0.04
CRNDE-206ENST00000559432 PDZD11Q5EBL8 140 aa15.31■□□□□ 0.04
CRNDE-206ENST00000559432 CBLN2Q8IUK8 224 aa15.31■□□□□ 0.04
CRNDE-206ENST00000559432 XAGE1AQ9HD64 81 aa15.31■□□□□ 0.04
CRNDE-206ENST00000559432 PMVKQ15126 192 aa15.3■□□□□ 0.04
CRNDE-206ENST00000559432 COX7B2Q8TF08 81 aa15.3■□□□□ 0.04
CRNDE-206ENST00000559432 IGLV5-45A0A087WSX0 123 aa15.29■□□□□ 0.04
CRNDE-206ENST00000559432 LINC00614P0C842 121 aa15.29■□□□□ 0.04
CRNDE-206ENST00000559432 LBHQ53QV2 105 aaPredicted RBP15.28■□□□□ 0.04
CRNDE-206ENST00000559432 C22orf24Q9Y442 160 aa15.28■□□□□ 0.04
CRNDE-206ENST00000559432 A0A096LNJ9 63 aa15.27■□□□□ 0.04
CRNDE-206ENST00000559432 H3BRM9 83 aa15.25■□□□□ 0.03
CRNDE-206ENST00000559432 SPINK8P0C7L1 97 aa15.25■□□□□ 0.03
CRNDE-206ENST00000559432 PRR26Q8N8Z3 221 aa15.25■□□□□ 0.03
CRNDE-206ENST00000559432 RAB5BP61020 215 aa15.23■□□□□ 0.03
CRNDE-206ENST00000559432 NUPR1O60356 82 aa15.22■□□□□ 0.03
CRNDE-206ENST00000559432 PMCHL1Q16048 86 aa15.22■□□□□ 0.03
CRNDE-206ENST00000559432 HBDP02042 147 aa15.21■□□□□ 0.03
CRNDE-206ENST00000559432 NDUFA6P56556 154 aa15.21■□□□□ 0.03
CRNDE-206ENST00000559432 TP73-AS1Q9UF72 201 aa15.21■□□□□ 0.03
CRNDE-206ENST00000559432 MRPL55Q7Z7F7 128 aaKnown RBP15.2■□□□□ 0.02
CRNDE-206ENST00000559432 IGLV1-50A0A075B6I6 118 aa15.19■□□□□ 0.02
CRNDE-206ENST00000559432 ZNF861PO60384 105 aa15.18■□□□□ 0.02
CRNDE-206ENST00000559432 ATP5LO75964 103 aa15.18■□□□□ 0.02
CRNDE-206ENST00000559432 IGLC3P0DOY3 106 aa15.17■□□□□ 0.02
CRNDE-206ENST00000559432 KRTAP1-4P0C5Y4 121 aa15.16■□□□□ 0.02
CRNDE-206ENST00000559432 TRGC2P03986 189 aa15.15■□□□□ 0.02
CRNDE-206ENST00000559432 CHCHD1Q96BP2 118 aaKnown RBP15.15■□□□□ 0.02
CRNDE-206ENST00000559432 COLCA2A8K830 154 aa15.12■□□□□ 0.01
CRNDE-206ENST00000559432 ZNF22P17026 224 aaPredicted RBP15.12■□□□□ 0.01
CRNDE-206ENST00000559432 RPL13AP40429 203 aaKnown RBP15.12■□□□□ 0.01
CRNDE-206ENST00000559432 IGLV5-39A0A0G2JS06 123 aa15.11■□□□□ 0.01
CRNDE-206ENST00000559432 NKAPP1Q8N9T2 125 aa15.11■□□□□ 0.01
CRNDE-206ENST00000559432 LINC00167Q96N53 147 aa15.11■□□□□ 0.01
CRNDE-206ENST00000559432 RPL37AP8A6NKH3 93 aa15.1■□□□□ 0.01
CRNDE-206ENST00000559432 BCE1O60756 84 aa15.1■□□□□ 0.01
CRNDE-206ENST00000559432 PFN2P35080 140 aa15.1■□□□□ 0.01
CRNDE-206ENST00000559432 RPL28P46779 137 aaKnown RBP15.1■□□□□ 0.01
CRNDE-206ENST00000559432 GAGE10A6NGK3 116 aa15.09■□□□□ 0.01
CRNDE-206ENST00000559432 BAGE3Q86Y29 109 aa15.09■□□□□ 0.01
CRNDE-206ENST00000559432 IGLV5-37A0A075B6J1 123 aa15.08■□□□□ 0
CRNDE-206ENST00000559432 LRP2P98164 4655 aa15.07■□□□□ 0
CRNDE-206ENST00000559432 TMEM170BQ5T4T1 132 aa15.06■□□□□ 0
CRNDE-206ENST00000559432 ERG28Q9UKR5 140 aa15.05■□□□□ -0
CRNDE-206ENST00000559432 C11orf86A6NJI1 115 aa15.04■□□□□ -0
CRNDE-206ENST00000559432 HSBP1O75506 76 aa15.04■□□□□ -0
CRNDE-206ENST00000559432 FAM19A2Q8N3H0 131 aa15.04■□□□□ -0
CRNDE-206ENST00000559432 SCO1O75880 301 aa15.03■□□□□ -0
CRNDE-206ENST00000559432 IFI27L1Q96BM0 104 aa15.03■□□□□ -0
CRNDE-206ENST00000559432 LINC00310P59036 64 aa15.02■□□□□ -0
CRNDE-206ENST00000559432 COX17Q14061 63 aa15.02■□□□□ -0
CRNDE-206ENST00000559432 SFTA2Q6UW10 78 aa15.02■□□□□ -0
CRNDE-206ENST00000559432 CHTOPQ9Y3Y2 248 aaKnown RBP15.02■□□□□ -0
CRNDE-206ENST00000559432 ZNF625Q96I27 306 aaPredicted RBP15.01□□□□□ -0.01
CRNDE-206ENST00000559432 SERF1AO75920 110 aa15□□□□□ -0.01
CRNDE-206ENST00000559432 UBE2AP49459 152 aa15□□□□□ -0.01
CRNDE-206ENST00000559432 SND1-IT1Q9HBX3 110 aa15□□□□□ -0.01
CRNDE-206ENST00000559432 IGKV2-28A0A075B6P5 120 aa14.99□□□□□ -0.01
CRNDE-206ENST00000559432 TRAV12-1A0A0B4J245 112 aa14.99□□□□□ -0.01
CRNDE-206ENST00000559432 IGKV2D-28P01615 120 aa14.99□□□□□ -0.01
CRNDE-206ENST00000559432 RPL24P83731 157 aaKnown RBP14.98□□□□□ -0.01
CRNDE-206ENST00000559432 VPREB1P12018 145 aa14.96□□□□□ -0.01
CRNDE-206ENST00000559432 CRYGAP11844 174 aa14.94□□□□□ -0.02
CRNDE-206ENST00000559432 LEPROTL1O95214 131 aa14.93□□□□□ -0.02
CRNDE-206ENST00000559432 LINC00158P58513 81 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms