RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 COX19Q49B96 90 aa10.87□□□□□ -0.67
TPM1-218ENST00000559281 M0QXV9 152 aa10.86□□□□□ -0.67
TPM1-218ENST00000559281 UBE2BP63146 152 aa10.86□□□□□ -0.67
TPM1-218ENST00000559281 CDKN2A-AS1Q9UH64 79 aa10.86□□□□□ -0.67
TPM1-218ENST00000559281 CXCL5P42830 114 aa10.83□□□□□ -0.68
TPM1-218ENST00000559281 C9orf129Q5T035 196 aaKnown RBP10.83□□□□□ -0.68
TPM1-218ENST00000559281 F8VRH5 84 aa10.82□□□□□ -0.68
TPM1-218ENST00000559281 KRTAP7-1Q8IUC3 87 aa10.82□□□□□ -0.68
TPM1-218ENST00000559281 LINC00469Q8N7U9 141 aa10.82□□□□□ -0.68
TPM1-218ENST00000559281 TINCRA0A1B0GVN0 87 aa10.81□□□□□ -0.68
TPM1-218ENST00000559281 LINC01546A6NGU7 62 aa10.81□□□□□ -0.68
TPM1-218ENST00000559281 FABP9Q0Z7S8 132 aa10.81□□□□□ -0.68
TPM1-218ENST00000559281 FA2HQ7L5A8 372 aa10.81□□□□□ -0.68
TPM1-218ENST00000559281 COMMD7Q86VX2 200 aa10.81□□□□□ -0.68
TPM1-218ENST00000559281 KRTAP11-1Q8IUC1 163 aa10.81□□□□□ -0.68
TPM1-218ENST00000559281 SMCO4Q9NRQ5 59 aa10.81□□□□□ -0.68
TPM1-218ENST00000559281 H0Y9J4 135 aa10.8□□□□□ -0.68
TPM1-218ENST00000559281 LBHQ53QV2 105 aaPredicted RBP10.8□□□□□ -0.68
TPM1-218ENST00000559281 PDZD11Q5EBL8 140 aa10.8□□□□□ -0.68
TPM1-218ENST00000559281 ODF1Q14990 250 aa10.79□□□□□ -0.68
TPM1-218ENST00000559281 RHEBQ15382 184 aa10.79□□□□□ -0.68
TPM1-218ENST00000559281 MRPL18Q9H0U6 180 aaKnown RBP10.79□□□□□ -0.68
TPM1-218ENST00000559281 CST9LQ9H4G1 147 aa10.79□□□□□ -0.68
TPM1-218ENST00000559281 RPS10P5Q9NQ39 176 aa10.79□□□□□ -0.68
TPM1-218ENST00000559281 TNXBP22105 4242 aa10.78□□□□□ -0.68
TPM1-218ENST00000559281 SMIM1B2RUZ4 78 aa10.77□□□□□ -0.69
TPM1-218ENST00000559281 PMVKQ15126 192 aa10.77□□□□□ -0.69
TPM1-218ENST00000559281 C10orf91Q5T1B1 145 aa10.77□□□□□ -0.69
TPM1-218ENST00000559281 COX7B2Q8TF08 81 aa10.77□□□□□ -0.69
TPM1-218ENST00000559281 XAGE1AQ9HD64 81 aa10.77□□□□□ -0.69
TPM1-218ENST00000559281 C22orf24Q9Y442 160 aa10.77□□□□□ -0.69
TPM1-218ENST00000559281 IGLV5-45A0A087WSX0 123 aa10.76□□□□□ -0.69
TPM1-218ENST00000559281 CARHSP1Q9Y2V2 147 aaKnown RBP10.76□□□□□ -0.69
TPM1-218ENST00000559281 PRR26Q8N8Z3 221 aa10.75□□□□□ -0.69
TPM1-218ENST00000559281 UBR4Q5T4S7 5183 aa10.75□□□□□ -0.69
TPM1-218ENST00000559281 IGLV1-50A0A075B6I6 118 aa10.74□□□□□ -0.69
TPM1-218ENST00000559281 H3BRM9 83 aa10.74□□□□□ -0.69
TPM1-218ENST00000559281 NUPR1O60356 82 aa10.74□□□□□ -0.69
TPM1-218ENST00000559281 TP73-AS1Q9UF72 201 aa10.74□□□□□ -0.69
TPM1-218ENST00000559281 ZNF861PO60384 105 aa10.72□□□□□ -0.69
TPM1-218ENST00000559281 MRPL55Q7Z7F7 128 aaKnown RBP10.72□□□□□ -0.69
TPM1-218ENST00000559281 TRAPPC1Q9Y5R8 145 aa10.72□□□□□ -0.69
TPM1-218ENST00000559281 SPINK8P0C7L1 97 aa10.71□□□□□ -0.69
TPM1-218ENST00000559281 LINC00614P0C842 121 aa10.71□□□□□ -0.69
TPM1-218ENST00000559281 ATP5LO75964 103 aa10.7□□□□□ -0.7
TPM1-218ENST00000559281 RPL13AP40429 203 aaKnown RBP10.7□□□□□ -0.7
TPM1-218ENST00000559281 NDUFA6P56556 154 aa10.7□□□□□ -0.7
TPM1-218ENST00000559281 RAB5BP61020 215 aa10.69□□□□□ -0.7
TPM1-218ENST00000559281 KRTAP1-4P0C5Y4 121 aa10.68□□□□□ -0.7
TPM1-218ENST00000559281 IGLC3P0DOY3 106 aa10.68□□□□□ -0.7
TPM1-218ENST00000559281 HBDP02042 147 aa10.67□□□□□ -0.7
TPM1-218ENST00000559281 RPL28P46779 137 aaKnown RBP10.67□□□□□ -0.7
TPM1-218ENST00000559281 NDUFA5Q16718 116 aa10.67□□□□□ -0.7
TPM1-218ENST00000559281 C18orf32Q8TCD1 76 aa10.67□□□□□ -0.7
TPM1-218ENST00000559281 APOC3P02656 99 aa10.66□□□□□ -0.7
TPM1-218ENST00000559281 BCE1O60756 84 aa10.65□□□□□ -0.7
TPM1-218ENST00000559281 SNAPINO95295 136 aa10.65□□□□□ -0.7
TPM1-218ENST00000559281 SVBPQ8N300 66 aa10.65□□□□□ -0.7
TPM1-218ENST00000559281 NKAPP1Q8N9T2 125 aa10.65□□□□□ -0.7
TPM1-218ENST00000559281 LINC00167Q96N53 147 aa10.65□□□□□ -0.7
TPM1-218ENST00000559281 A0A096LNJ9 63 aa10.64□□□□□ -0.71
TPM1-218ENST00000559281 IGLV5-37A0A075B6J1 123 aa10.63□□□□□ -0.71
TPM1-218ENST00000559281 IGLV5-39A0A0G2JS06 123 aa10.63□□□□□ -0.71
TPM1-218ENST00000559281 RPL37AP8A6NKH3 93 aa10.63□□□□□ -0.71
TPM1-218ENST00000559281 ZNF22P17026 224 aaPredicted RBP10.63□□□□□ -0.71
TPM1-218ENST00000559281 URB1-AS1Q96HZ7 61 aa10.63□□□□□ -0.71
TPM1-218ENST00000559281 GAGE10A6NGK3 116 aa10.62□□□□□ -0.71
TPM1-218ENST00000559281 PFN2P35080 140 aa10.62□□□□□ -0.71
TPM1-218ENST00000559281 LRP2P98164 4655 aa10.62□□□□□ -0.71
TPM1-218ENST00000559281 BAGE3Q86Y29 109 aa10.62□□□□□ -0.71
TPM1-218ENST00000559281 COX17Q14061 63 aa10.61□□□□□ -0.71
TPM1-218ENST00000559281 PMCHL1Q16048 86 aa10.61□□□□□ -0.71
TPM1-218ENST00000559281 SFTA2Q6UW10 78 aa10.61□□□□□ -0.71
TPM1-218ENST00000559281 TMEM170BQ5T4T1 132 aa10.6□□□□□ -0.71
TPM1-218ENST00000559281 ERG28Q9UKR5 140 aa10.59□□□□□ -0.71
TPM1-218ENST00000559281 UBE2AP49459 152 aa10.58□□□□□ -0.72
TPM1-218ENST00000559281 RPL24P83731 157 aaKnown RBP10.58□□□□□ -0.72
TPM1-218ENST00000559281 C11orf86A6NJI1 115 aa10.56□□□□□ -0.72
TPM1-218ENST00000559281 CRYGAP11844 174 aa10.56□□□□□ -0.72
TPM1-218ENST00000559281 CHCHD1Q96BP2 118 aaKnown RBP10.56□□□□□ -0.72
TPM1-218ENST00000559281 SND1-IT1Q9HBX3 110 aa10.56□□□□□ -0.72
TPM1-218ENST00000559281 CHTOPQ9Y3Y2 248 aaKnown RBP10.56□□□□□ -0.72
TPM1-218ENST00000559281 ZNF625Q96I27 306 aaPredicted RBP10.55□□□□□ -0.72
TPM1-218ENST00000559281 IGKV2-28A0A075B6P5 120 aa10.54□□□□□ -0.72
TPM1-218ENST00000559281 IGKV2D-28P01615 120 aa10.54□□□□□ -0.72
TPM1-218ENST00000559281 VPREB1P12018 145 aa10.53□□□□□ -0.72
TPM1-218ENST00000559281 TYMSOSQ8TAI1 123 aa10.53□□□□□ -0.72
TPM1-218ENST00000559281 IFI27L1Q96BM0 104 aa10.53□□□□□ -0.72
TPM1-218ENST00000559281 TRAV12-1A0A0B4J245 112 aa10.52□□□□□ -0.73
TPM1-218ENST00000559281 PRR4Q16378 134 aa10.52□□□□□ -0.73
TPM1-218ENST00000559281 SCO1O75880 301 aa10.51□□□□□ -0.73
TPM1-218ENST00000559281 LINC00158P58513 81 aa10.51□□□□□ -0.73
TPM1-218ENST00000559281 KRTAP13-1Q8IUC0 172 aa10.51□□□□□ -0.73
TPM1-218ENST00000559281 A0A087X002 238 aa10.5□□□□□ -0.73
TPM1-218ENST00000559281 YPEL4Q96NS1 127 aa10.5□□□□□ -0.73
TPM1-218ENST00000559281 TMEM223A0PJW6 202 aa10.49□□□□□ -0.73
TPM1-218ENST00000559281 ATP6V1G1O75348 118 aa10.49□□□□□ -0.73
TPM1-218ENST00000559281 HSBP1O75506 76 aa10.48□□□□□ -0.73
TPM1-218ENST00000559281 TSPAN13O95857 204 aa10.48□□□□□ -0.73
TPM1-218ENST00000559281 FAM19A1Q7Z5A9 133 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms