RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 SOSTDC1Q6X4U4 206 aa8.74□□□□□ -1.01
SMAD3-207ENST00000558763 TOMM7Q9P0U1 55 aa8.74□□□□□ -1.01
SMAD3-207ENST00000558763 K7EP34 96 aa8.73□□□□□ -1.01
SMAD3-207ENST00000558763 TSPAN13O95857 204 aa8.73□□□□□ -1.01
SMAD3-207ENST00000558763 IGHV3-33P01772 117 aa8.73□□□□□ -1.01
SMAD3-207ENST00000558763 KIAA0087Q14695 138 aa8.73□□□□□ -1.01
SMAD3-207ENST00000558763 PGPEP1Q9NXJ5 209 aa8.73□□□□□ -1.01
SMAD3-207ENST00000558763 A0A0B4J2C4 111 aa8.73□□□□□ -1.01
SMAD3-207ENST00000558763 NPC2P61916 151 aa8.73□□□□□ -1.01
SMAD3-207ENST00000558763 C15orf53Q8NAA6 179 aa8.73□□□□□ -1.01
SMAD3-207ENST00000558763 KLK5Q9Y337 293 aaPredicted RBP8.73□□□□□ -1.01
SMAD3-207ENST00000558763 PRSS2P07478 247 aa8.72□□□□□ -1.01
SMAD3-207ENST00000558763 IFITM1P13164 125 aa8.72□□□□□ -1.01
SMAD3-207ENST00000558763 Q8IZM0 81 aa8.72□□□□□ -1.01
SMAD3-207ENST00000558763 LINC00308Q8TCZ7 52 aa8.72□□□□□ -1.01
SMAD3-207ENST00000558763 PLECQ15149 4684 aaKnown RBP8.72□□□□□ -1.01
SMAD3-207ENST00000558763 A0A0U1RRA0 63 aa8.72□□□□□ -1.01
SMAD3-207ENST00000558763 COX7A2LO14548 114 aa8.72□□□□□ -1.01
SMAD3-207ENST00000558763 FABP2P12104 132 aa8.71□□□□□ -1.02
SMAD3-207ENST00000558763 KRTAP26-1Q6PEX3 210 aa8.71□□□□□ -1.02
SMAD3-207ENST00000558763 PRO1854Q9UHT4 67 aa8.71□□□□□ -1.02
SMAD3-207ENST00000558763 SPCS1Q9Y6A9 102 aa8.71□□□□□ -1.02
SMAD3-207ENST00000558763 GAGE10A6NGK3 116 aa8.7□□□□□ -1.02
SMAD3-207ENST00000558763 CIRBPQ14011 172 aaKnown RBP8.7□□□□□ -1.02
SMAD3-207ENST00000558763 MEIG1Q5JSS6 88 aa8.7□□□□□ -1.02
SMAD3-207ENST00000558763 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.7□□□□□ -1.02
SMAD3-207ENST00000558763 GAGE12HA6NDE8 117 aa8.7□□□□□ -1.02
SMAD3-207ENST00000558763 LINC01556Q5JQF7 62 aa8.7□□□□□ -1.02
SMAD3-207ENST00000558763 PPDPFQ9H3Y8 114 aa8.7□□□□□ -1.02
SMAD3-207ENST00000558763 APLNQ9ULZ1 77 aa8.7□□□□□ -1.02
SMAD3-207ENST00000558763 C2orf82Q6UX34 121 aa8.69□□□□□ -1.02
SMAD3-207ENST00000558763 UBE2WQ96B02 151 aa8.69□□□□□ -1.02
SMAD3-207ENST00000558763 IBA57-AS1B1ANH7 110 aa8.68□□□□□ -1.02
SMAD3-207ENST00000558763 C6orf226Q5I0X4 101 aa8.68□□□□□ -1.02
SMAD3-207ENST00000558763 SFTA2Q6UW10 78 aa8.68□□□□□ -1.02
SMAD3-207ENST00000558763 LINC00588Q9Y4M8 146 aa8.68□□□□□ -1.02
SMAD3-207ENST00000558763 TRAV8-4A0A0B4J246 113 aa8.67□□□□□ -1.02
SMAD3-207ENST00000558763 DNAH10OSP0CZ25 163 aa8.67□□□□□ -1.02
SMAD3-207ENST00000558763 GTF2H5Q6ZYL4 71 aa8.67□□□□□ -1.02
SMAD3-207ENST00000558763 MIR7-3HGQ8N6C7 128 aa8.67□□□□□ -1.02
SMAD3-207ENST00000558763 CRPP02741 224 aa8.66□□□□□ -1.02
SMAD3-207ENST00000558763 CASC10Q5T4H9 136 aa8.66□□□□□ -1.02
SMAD3-207ENST00000558763 CCL18P55774 89 aa8.66□□□□□ -1.02
SMAD3-207ENST00000558763 ERG28Q9UKR5 140 aa8.66□□□□□ -1.02
SMAD3-207ENST00000558763 MALP21145 153 aa8.65□□□□□ -1.02
SMAD3-207ENST00000558763 C3orf84H3BNL1 204 aa8.64□□□□□ -1.03
SMAD3-207ENST00000558763 CXCL5P42830 114 aa8.64□□□□□ -1.03
SMAD3-207ENST00000558763 UBE2DNLQ8IWF7 75 aa8.64□□□□□ -1.03
SMAD3-207ENST00000558763 C6orf223Q8N319 242 aa8.64□□□□□ -1.03
SMAD3-207ENST00000558763 PFN2P35080 140 aa8.63□□□□□ -1.03
SMAD3-207ENST00000558763 LINC00158P58513 81 aa8.63□□□□□ -1.03
SMAD3-207ENST00000558763 SPAG11BQ08648 103 aa8.63□□□□□ -1.03
SMAD3-207ENST00000558763 C10orf25Q5T742 122 aa8.63□□□□□ -1.03
SMAD3-207ENST00000558763 LINC00526Q96FQ7 95 aa8.62□□□□□ -1.03
SMAD3-207ENST00000558763 H3BMG7 143 aa8.62□□□□□ -1.03
SMAD3-207ENST00000558763 H7C2G1 150 aa8.62□□□□□ -1.03
SMAD3-207ENST00000558763 CKS1BP61024 79 aa8.62□□□□□ -1.03
SMAD3-207ENST00000558763 CFAP161Q6P656 301 aa8.62□□□□□ -1.03
SMAD3-207ENST00000558763 COPS9Q8WXC6 57 aa8.62□□□□□ -1.03
SMAD3-207ENST00000558763 IGKV2-28A0A075B6P5 120 aa8.61□□□□□ -1.03
SMAD3-207ENST00000558763 LOC107984156A0A0G2JMH3 177 aa8.61□□□□□ -1.03
SMAD3-207ENST00000558763 IGKV2D-28P01615 120 aa8.61□□□□□ -1.03
SMAD3-207ENST00000558763 C9orf116Q5BN46 136 aaPredicted RBP8.61□□□□□ -1.03
SMAD3-207ENST00000558763 ARL17AQ8IVW1 177 aa8.61□□□□□ -1.03
SMAD3-207ENST00000558763 UPK3BQ9BT76 320 aa8.61□□□□□ -1.03
SMAD3-207ENST00000558763 PRO0461Q9UI25 63 aa8.61□□□□□ -1.03
SMAD3-207ENST00000558763 TRIAP1O43715 76 aa8.61□□□□□ -1.03
SMAD3-207ENST00000558763 TCL1BO95988 128 aa8.61□□□□□ -1.03
SMAD3-207ENST00000558763 RPL13AP40429 203 aaKnown RBP8.61□□□□□ -1.03
SMAD3-207ENST00000558763 UNQ6190/PRO20217Q6UXQ8 127 aa8.61□□□□□ -1.03
SMAD3-207ENST00000558763 C15orf56Q8N910 161 aa8.61□□□□□ -1.03
SMAD3-207ENST00000558763 TRBV30A0A0K0K1B3 111 aa8.6□□□□□ -1.03
SMAD3-207ENST00000558763 DNAH10Q8IVF4 4471 aa8.6□□□□□ -1.03
SMAD3-207ENST00000558763 COX17Q14061 63 aa8.59□□□□□ -1.03
SMAD3-207ENST00000558763 LINC00337Q8N6G1 96 aa8.59□□□□□ -1.03
SMAD3-207ENST00000558763 NTN5Q8WTR8 489 aaPredicted RBP8.59□□□□□ -1.03
SMAD3-207ENST00000558763 SND1-IT1Q9HBX3 110 aa8.59□□□□□ -1.03
SMAD3-207ENST00000558763 VPS13DQ5THJ4 4388 aa8.58□□□□□ -1.04
SMAD3-207ENST00000558763 Q1RN00 199 aa8.58□□□□□ -1.04
SMAD3-207ENST00000558763 C1orf43Q9BWL3 253 aa8.58□□□□□ -1.04
SMAD3-207ENST00000558763 GVQW2A0A096LPI5 108 aaPredicted RBP8.57□□□□□ -1.04
SMAD3-207ENST00000558763 LYRM7Q5U5X0 104 aa8.57□□□□□ -1.04
SMAD3-207ENST00000558763 PSMB2P49721 201 aa8.57□□□□□ -1.04
SMAD3-207ENST00000558763 MTURNQ8N3F0 131 aa8.57□□□□□ -1.04
SMAD3-207ENST00000558763 C6orf48Q9UBA6 75 aa8.57□□□□□ -1.04
SMAD3-207ENST00000558763 TRBV20-1A0A075B6N2 111 aa8.56□□□□□ -1.04
SMAD3-207ENST00000558763 IGKV2D-24A0A075B6R9 120 aa8.56□□□□□ -1.04
SMAD3-207ENST00000558763 LY6G6CO95867 125 aa8.56□□□□□ -1.04
SMAD3-207ENST00000558763 SMCPP49901 116 aaPredicted RBP8.56□□□□□ -1.04
SMAD3-207ENST00000558763 Q8NDZ9 215 aa8.56□□□□□ -1.04
SMAD3-207ENST00000558763 ALMS1Q8TCU4 4167 aa8.56□□□□□ -1.04
SMAD3-207ENST00000558763 HIGD2BQ4VC39 106 aa8.55□□□□□ -1.04
SMAD3-207ENST00000558763 Q9HAA7 133 aa8.55□□□□□ -1.04
SMAD3-207ENST00000558763 WFDC2Q14508 124 aa8.55□□□□□ -1.04
SMAD3-207ENST00000558763 SCGB1C2P0DMR2 95 aa8.54□□□□□ -1.04
SMAD3-207ENST00000558763 LINC00476Q8WZB0 136 aa8.54□□□□□ -1.04
SMAD3-207ENST00000558763 KRTAP1-5Q9BYS1 174 aa8.54□□□□□ -1.04
SMAD3-207ENST00000558763 F8W1H4 67 aa8.53□□□□□ -1.04
SMAD3-207ENST00000558763 TRAV13-2A0A0B4J235 113 aa8.53□□□□□ -1.04
SMAD3-207ENST00000558763 KMT2AQ03164 3969 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms