RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 ANKRD29Q8N6D5 301 aa7.26□□□□□ -1.25
TPM1-210ENST00000558264 A0A1B0GUV1 79 aa7.25□□□□□ -1.25
TPM1-210ENST00000558264 C6orf226Q5I0X4 101 aa7.25□□□□□ -1.25
TPM1-210ENST00000558264 COL6A5A8TX70 2615 aa7.25□□□□□ -1.25
TPM1-210ENST00000558264 ATXN8Q156A1 80 aa7.25□□□□□ -1.25
TPM1-210ENST00000558264 LINC01620Q4KN68 170 aa7.25□□□□□ -1.25
TPM1-210ENST00000558264 CARD19Q96LW7 228 aa7.25□□□□□ -1.25
TPM1-210ENST00000558264 REG3AQ06141 175 aa7.24□□□□□ -1.25
TPM1-210ENST00000558264 FOXI1Q12951 378 aa7.24□□□□□ -1.25
TPM1-210ENST00000558264 CHCHD10Q8WYQ3 142 aaPredicted RBP7.24□□□□□ -1.25
TPM1-210ENST00000558264 MRPL23Q16540 153 aaKnown RBP7.24□□□□□ -1.25
TPM1-210ENST00000558264 TEN1Q86WV5 123 aa7.23□□□□□ -1.25
TPM1-210ENST00000558264 LINC00526Q96FQ7 95 aa7.23□□□□□ -1.25
TPM1-210ENST00000558264 COX6CP09669 75 aa7.23□□□□□ -1.25
TPM1-210ENST00000558264 Q6ZTC4 211 aa7.23□□□□□ -1.25
TPM1-210ENST00000558264 SND1-IT1Q9HBX3 110 aa7.23□□□□□ -1.25
TPM1-210ENST00000558264 KLK12Q9UKR0 248 aa7.23□□□□□ -1.25
TPM1-210ENST00000558264 J3QR89 54 aa7.22□□□□□ -1.25
TPM1-210ENST00000558264 BAHCC1Q9P281 2608 aa7.22□□□□□ -1.25
TPM1-210ENST00000558264 CCL18P55774 89 aa7.22□□□□□ -1.25
TPM1-210ENST00000558264 LINC00337Q8N6G1 96 aa7.22□□□□□ -1.25
TPM1-210ENST00000558264 NTN5Q8WTR8 489 aaPredicted RBP7.22□□□□□ -1.25
TPM1-210ENST00000558264 CMYA5Q8N3K9 4069 aa7.21□□□□□ -1.25
TPM1-210ENST00000558264 IGKV2-28A0A075B6P5 120 aa7.21□□□□□ -1.25
TPM1-210ENST00000558264 IGKV2D-28P01615 120 aa7.21□□□□□ -1.25
TPM1-210ENST00000558264 MALP21145 153 aa7.21□□□□□ -1.25
TPM1-210ENST00000558264 C9orf116Q5BN46 136 aaPredicted RBP7.21□□□□□ -1.25
TPM1-210ENST00000558264 GAGE12HA6NDE8 117 aa7.21□□□□□ -1.26
TPM1-210ENST00000558264 COX7A2LO14548 114 aa7.21□□□□□ -1.26
TPM1-210ENST00000558264 CKS1BP61024 79 aa7.2□□□□□ -1.26
TPM1-210ENST00000558264 SHISA2Q6UWI4 295 aa7.2□□□□□ -1.26
TPM1-210ENST00000558264 PPDPFLQ8WWR9 84 aa7.2□□□□□ -1.26
TPM1-210ENST00000558264 A0A0J9YWU9 116 aa7.2□□□□□ -1.26
TPM1-210ENST00000558264 TEX49A0A1B0GTD5 131 aa7.2□□□□□ -1.26
TPM1-210ENST00000558264 LELP1Q5T871 98 aa7.2□□□□□ -1.26
TPM1-210ENST00000558264 CD164L2Q6UWJ8 174 aa7.2□□□□□ -1.26
TPM1-210ENST00000558264 IBA57-AS1B1ANH7 110 aa7.19□□□□□ -1.26
TPM1-210ENST00000558264 LST1O00453 97 aa7.19□□□□□ -1.26
TPM1-210ENST00000558264 CRPP02741 224 aa7.19□□□□□ -1.26
TPM1-210ENST00000558264 NANOS2P60321 138 aaKnown RBP7.19□□□□□ -1.26
TPM1-210ENST00000558264 LYPD5Q6UWN5 251 aa7.19□□□□□ -1.26
TPM1-210ENST00000558264 C6orf223Q8N319 242 aa7.19□□□□□ -1.26
TPM1-210ENST00000558264 COPS9Q8WXC6 57 aa7.19□□□□□ -1.26
TPM1-210ENST00000558264 TRBV10-2A0A0K0K1G8 114 aa7.19□□□□□ -1.26
TPM1-210ENST00000558264 PRR3P79522 188 aaKnown RBP7.19□□□□□ -1.26
TPM1-210ENST00000558264 KPRPQ5T749 579 aaPredicted RBP7.19□□□□□ -1.26
TPM1-210ENST00000558264 WFDC10BQ8IUB3 73 aa7.19□□□□□ -1.26
TPM1-210ENST00000558264 Q8IZM0 81 aa7.19□□□□□ -1.26
TPM1-210ENST00000558264 EGFEM1PQ0D2K5 195 aa7.18□□□□□ -1.26
TPM1-210ENST00000558264 FAM218AQ96MZ4 157 aa7.18□□□□□ -1.26
TPM1-210ENST00000558264 OR13C6PQ8NH95 151 aa7.18□□□□□ -1.26
TPM1-210ENST00000558264 UBE2WQ96B02 151 aa7.18□□□□□ -1.26
TPM1-210ENST00000558264 KIAA0087Q14695 138 aa7.17□□□□□ -1.26
TPM1-210ENST00000558264 ENHOQ6UWT2 76 aa7.17□□□□□ -1.26
TPM1-210ENST00000558264 NBEAL1Q6ZS30 2694 aa7.17□□□□□ -1.26
TPM1-210ENST00000558264 C10orf25Q5T742 122 aa7.16□□□□□ -1.26
TPM1-210ENST00000558264 MRAPQ8TCY5 172 aa7.16□□□□□ -1.26
TPM1-210ENST00000558264 SMIM11BQ8TCY0 68 aa7.16□□□□□ -1.26
TPM1-210ENST00000558264 TRAV13-2A0A0B4J235 113 aa7.15□□□□□ -1.26
TPM1-210ENST00000558264 TRAV8-4A0A0B4J246 113 aa7.15□□□□□ -1.26
TPM1-210ENST00000558264 UNQ6190/PRO20217Q6UXQ8 127 aa7.15□□□□□ -1.26
TPM1-210ENST00000558264 SPATA25Q9BR10 227 aa7.15□□□□□ -1.26
TPM1-210ENST00000558264 CDIP1Q9H305 208 aa7.15□□□□□ -1.26
TPM1-210ENST00000558264 Q9HAA7 133 aa7.15□□□□□ -1.26
TPM1-210ENST00000558264 SPAG11BQ08648 103 aa7.14□□□□□ -1.27
TPM1-210ENST00000558264 SIGMAR1Q99720 223 aa7.14□□□□□ -1.27
TPM1-210ENST00000558264 DEFB131BA0A096LNP1 70 aa7.13□□□□□ -1.27
TPM1-210ENST00000558264 ESRGQ1W209 222 aa7.13□□□□□ -1.27
TPM1-210ENST00000558264 Q8NDZ9 215 aa7.13□□□□□ -1.27
TPM1-210ENST00000558264 C11orf45Q8TAV5 145 aa7.13□□□□□ -1.27
TPM1-210ENST00000558264 PRR34Q9NV39 138 aa7.13□□□□□ -1.27
TPM1-210ENST00000558264 A0A087WYN8 130 aa7.13□□□□□ -1.27
TPM1-210ENST00000558264 DEFB121Q5J5C9 76 aa7.13□□□□□ -1.27
TPM1-210ENST00000558264 MT-ATP8P03928 68 aa7.12□□□□□ -1.27
TPM1-210ENST00000558264 XGP55808 180 aa7.12□□□□□ -1.27
TPM1-210ENST00000558264 HIGD2BQ4VC39 106 aa7.12□□□□□ -1.27
TPM1-210ENST00000558264 MGAM2Q2M2H8 2515 aa7.12□□□□□ -1.27
TPM1-210ENST00000558264 H3BT86 120 aa7.12□□□□□ -1.27
TPM1-210ENST00000558264 NCR3O14931 201 aa7.12□□□□□ -1.27
TPM1-210ENST00000558264 RPL28P46779 137 aaKnown RBP7.12□□□□□ -1.27
TPM1-210ENST00000558264 M0QXV9 152 aa7.11□□□□□ -1.27
TPM1-210ENST00000558264 LINC01561Q8N1V8 128 aa7.11□□□□□ -1.27
TPM1-210ENST00000558264 A0A1B0GV72 72 aa7.1□□□□□ -1.27
TPM1-210ENST00000558264 DNAH3Q8TD57 4116 aa7.09□□□□□ -1.27
TPM1-210ENST00000558264 SLPIP03973 132 aa7.09□□□□□ -1.27
TPM1-210ENST00000558264 BAALC-AS2P0C853 105 aa7.09□□□□□ -1.27
TPM1-210ENST00000558264 CXCL5P42830 114 aa7.09□□□□□ -1.27
TPM1-210ENST00000558264 PPDPFQ9H3Y8 114 aa7.09□□□□□ -1.27
TPM1-210ENST00000558264 KLK5Q9Y337 293 aaPredicted RBP7.09□□□□□ -1.27
TPM1-210ENST00000558264 LECT2O14960 151 aa7.08□□□□□ -1.28
TPM1-210ENST00000558264 XAGE1AQ9HD64 81 aa7.08□□□□□ -1.28
TPM1-210ENST00000558264 K7EIL1 84 aa7.07□□□□□ -1.28
TPM1-210ENST00000558264 TRACP01848 142 aa7.07□□□□□ -1.28
TPM1-210ENST00000558264 KRTAP21-3Q3LHN1 58 aa7.07□□□□□ -1.28
TPM1-210ENST00000558264 H3BNG1 76 aa7.07□□□□□ -1.28
TPM1-210ENST00000558264 C6orf48Q9UBA6 75 aa7.07□□□□□ -1.28
TPM1-210ENST00000558264 C22orf24Q9Y442 160 aa7.07□□□□□ -1.28
TPM1-210ENST00000558264 COX17Q14061 63 aa7.06□□□□□ -1.28
TPM1-210ENST00000558264 C9orf129Q5T035 196 aaKnown RBP7.06□□□□□ -1.28
TPM1-210ENST00000558264 LINC01600Q96MT4 127 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms