RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 CDKN2A-AS1Q9UH64 79 aa13.89□□□□□ -0.19
TMEM260-214ENST00000556975 C6orf226Q5I0X4 101 aa13.88□□□□□ -0.19
TMEM260-214ENST00000556975 SCGB3A1Q96QR1 104 aa13.88□□□□□ -0.19
TMEM260-214ENST00000556975 CKS1BP61024 79 aa13.87□□□□□ -0.19
TMEM260-214ENST00000556975 FAM19A5Q7Z5A7 132 aaPredicted RBP13.87□□□□□ -0.19
TMEM260-214ENST00000556975 GEMIN7Q9H840 131 aaKnown RBP13.87□□□□□ -0.19
TMEM260-214ENST00000556975 TOMM7Q9P0U1 55 aa13.87□□□□□ -0.19
TMEM260-214ENST00000556975 CARHSP1Q9Y2V2 147 aaKnown RBP13.87□□□□□ -0.19
TMEM260-214ENST00000556975 RHEBQ15382 184 aa13.86□□□□□ -0.19
TMEM260-214ENST00000556975 C9orf129Q5T035 196 aaKnown RBP13.86□□□□□ -0.19
TMEM260-214ENST00000556975 KRTAP11-1Q8IUC1 163 aa13.86□□□□□ -0.19
TMEM260-214ENST00000556975 LRP2P98164 4655 aa13.85□□□□□ -0.19
TMEM260-214ENST00000556975 IGLV7-43P04211 117 aa13.84□□□□□ -0.19
TMEM260-214ENST00000556975 MRPL18Q9H0U6 180 aaKnown RBP13.84□□□□□ -0.19
TMEM260-214ENST00000556975 FABP9Q0Z7S8 132 aa13.83□□□□□ -0.2
TMEM260-214ENST00000556975 RPS10P5Q9NQ39 176 aa13.83□□□□□ -0.2
TMEM260-214ENST00000556975 TINCRA0A1B0GVN0 87 aa13.82□□□□□ -0.2
TMEM260-214ENST00000556975 M0QXV9 152 aa13.82□□□□□ -0.2
TMEM260-214ENST00000556975 IGLV5-45A0A087WSX0 123 aa13.81□□□□□ -0.2
TMEM260-214ENST00000556975 F8VRH5 84 aa13.81□□□□□ -0.2
TMEM260-214ENST00000556975 CXCL5P42830 114 aa13.8□□□□□ -0.2
TMEM260-214ENST00000556975 FA2HQ7L5A8 372 aa13.8□□□□□ -0.2
TMEM260-214ENST00000556975 LINC00469Q8N7U9 141 aa13.8□□□□□ -0.2
TMEM260-214ENST00000556975 CST9LQ9H4G1 147 aa13.8□□□□□ -0.2
TMEM260-214ENST00000556975 SMIM1B2RUZ4 78 aa13.79□□□□□ -0.2
TMEM260-214ENST00000556975 ODF1Q14990 250 aa13.79□□□□□ -0.2
TMEM260-214ENST00000556975 PDZD11Q5EBL8 140 aa13.79□□□□□ -0.2
TMEM260-214ENST00000556975 DIRC1Q969H9 104 aa13.79□□□□□ -0.2
TMEM260-214ENST00000556975 SMCO4Q9NRQ5 59 aa13.78□□□□□ -0.2
TMEM260-214ENST00000556975 UBE2BP63146 152 aa13.77□□□□□ -0.21
TMEM260-214ENST00000556975 PMVKQ15126 192 aa13.77□□□□□ -0.21
TMEM260-214ENST00000556975 RNF213Q63HN8 5207 aa13.77□□□□□ -0.21
TMEM260-214ENST00000556975 H0Y9J4 135 aa13.75□□□□□ -0.21
TMEM260-214ENST00000556975 COX7B2Q8TF08 81 aa13.75□□□□□ -0.21
TMEM260-214ENST00000556975 XAGE1AQ9HD64 81 aa13.74□□□□□ -0.21
TMEM260-214ENST00000556975 C22orf24Q9Y442 160 aa13.73□□□□□ -0.21
TMEM260-214ENST00000556975 TRAPPC1Q9Y5R8 145 aa13.73□□□□□ -0.21
TMEM260-214ENST00000556975 A0A096LNJ9 63 aa13.72□□□□□ -0.21
TMEM260-214ENST00000556975 C18orf32Q8TCD1 76 aa13.72□□□□□ -0.21
TMEM260-214ENST00000556975 URB1-AS1Q96HZ7 61 aa13.72□□□□□ -0.21
TMEM260-214ENST00000556975 LINC00614P0C842 121 aa13.71□□□□□ -0.21
TMEM260-214ENST00000556975 LBHQ53QV2 105 aaPredicted RBP13.71□□□□□ -0.21
TMEM260-214ENST00000556975 TP73-AS1Q9UF72 201 aa13.71□□□□□ -0.21
TMEM260-214ENST00000556975 APOC3P02656 99 aa13.69□□□□□ -0.22
TMEM260-214ENST00000556975 SPINK8P0C7L1 97 aa13.69□□□□□ -0.22
TMEM260-214ENST00000556975 H3BRM9 83 aa13.68□□□□□ -0.22
TMEM260-214ENST00000556975 IGLC3P0DOY3 106 aa13.68□□□□□ -0.22
TMEM260-214ENST00000556975 NUPR1O60356 82 aa13.67□□□□□ -0.22
TMEM260-214ENST00000556975 SNAPINO95295 136 aa13.67□□□□□ -0.22
TMEM260-214ENST00000556975 SVBPQ8N300 66 aa13.67□□□□□ -0.22
TMEM260-214ENST00000556975 HBDP02042 147 aa13.66□□□□□ -0.22
TMEM260-214ENST00000556975 KRTAP1-4P0C5Y4 121 aa13.66□□□□□ -0.22
TMEM260-214ENST00000556975 PRR26Q8N8Z3 221 aa13.66□□□□□ -0.22
TMEM260-214ENST00000556975 ZNF861PO60384 105 aa13.65□□□□□ -0.22
TMEM260-214ENST00000556975 NDUFA5Q16718 116 aa13.65□□□□□ -0.22
TMEM260-214ENST00000556975 MRPL55Q7Z7F7 128 aaKnown RBP13.65□□□□□ -0.22
TMEM260-214ENST00000556975 IGLV1-50A0A075B6I6 118 aa13.64□□□□□ -0.23
TMEM260-214ENST00000556975 IGLV5-39A0A0G2JS06 123 aa13.64□□□□□ -0.23
TMEM260-214ENST00000556975 RAB5BP61020 215 aa13.64□□□□□ -0.23
TMEM260-214ENST00000556975 ZNF22P17026 224 aaPredicted RBP13.62□□□□□ -0.23
TMEM260-214ENST00000556975 NDUFA6P56556 154 aa13.62□□□□□ -0.23
TMEM260-214ENST00000556975 ATP5LO75964 103 aa13.61□□□□□ -0.23
TMEM260-214ENST00000556975 IGLV5-37A0A075B6J1 123 aa13.6□□□□□ -0.23
TMEM260-214ENST00000556975 PMCHL1Q16048 86 aa13.6□□□□□ -0.23
TMEM260-214ENST00000556975 LINC00167Q96N53 147 aa13.6□□□□□ -0.23
TMEM260-214ENST00000556975 YPEL4Q96NS1 127 aa13.6□□□□□ -0.23
TMEM260-214ENST00000556975 BAGE3Q86Y29 109 aa13.58□□□□□ -0.24
TMEM260-214ENST00000556975 BCE1O60756 84 aa13.57□□□□□ -0.24
TMEM260-214ENST00000556975 C11orf86A6NJI1 115 aa13.55□□□□□ -0.24
TMEM260-214ENST00000556975 RPL13AP40429 203 aaKnown RBP13.55□□□□□ -0.24
TMEM260-214ENST00000556975 RPL37AP8A6NKH3 93 aa13.54□□□□□ -0.24
TMEM260-214ENST00000556975 RPL28P46779 137 aaKnown RBP13.54□□□□□ -0.24
TMEM260-214ENST00000556975 CHCHD1Q96BP2 118 aaKnown RBP13.54□□□□□ -0.24
TMEM260-214ENST00000556975 PFN2P35080 140 aa13.53□□□□□ -0.24
TMEM260-214ENST00000556975 COX17Q14061 63 aa13.53□□□□□ -0.24
TMEM260-214ENST00000556975 NKAPP1Q8N9T2 125 aa13.53□□□□□ -0.24
TMEM260-214ENST00000556975 ERG28Q9UKR5 140 aa13.53□□□□□ -0.24
TMEM260-214ENST00000556975 TMEM170BQ5T4T1 132 aa13.52□□□□□ -0.25
TMEM260-214ENST00000556975 SFTA2Q6UW10 78 aa13.52□□□□□ -0.25
TMEM260-214ENST00000556975 GAGE10A6NGK3 116 aa13.51□□□□□ -0.25
TMEM260-214ENST00000556975 CHTOPQ9Y3Y2 248 aaKnown RBP13.51□□□□□ -0.25
TMEM260-214ENST00000556975 SND1-IT1Q9HBX3 110 aa13.5□□□□□ -0.25
TMEM260-214ENST00000556975 TRAV12-1A0A0B4J245 112 aa13.49□□□□□ -0.25
TMEM260-214ENST00000556975 IFI27L1Q96BM0 104 aa13.48□□□□□ -0.25
TMEM260-214ENST00000556975 ZNF625Q96I27 306 aaPredicted RBP13.48□□□□□ -0.25
TMEM260-214ENST00000556975 VPREB1P12018 145 aa13.47□□□□□ -0.25
TMEM260-214ENST00000556975 KRTAP13-1Q8IUC0 172 aa13.47□□□□□ -0.25
TMEM260-214ENST00000556975 TMEM223A0PJW6 202 aa13.45□□□□□ -0.26
TMEM260-214ENST00000556975 RPL24P83731 157 aaKnown RBP13.45□□□□□ -0.26
TMEM260-214ENST00000556975 SCO1O75880 301 aa13.44□□□□□ -0.26
TMEM260-214ENST00000556975 IGKV2-28A0A075B6P5 120 aa13.43□□□□□ -0.26
TMEM260-214ENST00000556975 IGKV2D-28P01615 120 aa13.43□□□□□ -0.26
TMEM260-214ENST00000556975 CBLN2Q8IUK8 224 aa13.43□□□□□ -0.26
TMEM260-214ENST00000556975 LPAP08519 4548 aa13.42□□□□□ -0.26
TMEM260-214ENST00000556975 A0A087X002 238 aa13.41□□□□□ -0.26
TMEM260-214ENST00000556975 HSBP1O75506 76 aa13.41□□□□□ -0.26
TMEM260-214ENST00000556975 UBE2AP49459 152 aa13.41□□□□□ -0.26
TMEM260-214ENST00000556975 CRYGAP11844 174 aa13.4□□□□□ -0.26
TMEM260-214ENST00000556975 Q8NDZ9 215 aa13.4□□□□□ -0.26
TMEM260-214ENST00000556975 FAM19A2Q8N3H0 131 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms