RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 ZNF861PO60384 105 aa4.7□□□□□ -1.66
PTCSC3-201ENST00000556013 CXCL5P42830 114 aa4.7□□□□□ -1.66
PTCSC3-201ENST00000556013 CKS1BP61024 79 aa4.7□□□□□ -1.66
PTCSC3-201ENST00000556013 RAB14P61106 215 aa4.7□□□□□ -1.66
PTCSC3-201ENST00000556013 UBE2BP63146 152 aa4.7□□□□□ -1.66
PTCSC3-201ENST00000556013 C9orf129Q5T035 196 aaKnown RBP4.7□□□□□ -1.66
PTCSC3-201ENST00000556013 TP73-AS1Q9UF72 201 aa4.7□□□□□ -1.66
PTCSC3-201ENST00000556013 TRAV9-1A0A075B6T8 112 aa4.69□□□□□ -1.66
PTCSC3-201ENST00000556013 KRTAP1-4P0C5Y4 121 aa4.69□□□□□ -1.66
PTCSC3-201ENST00000556013 C2orf82Q6UX34 121 aa4.69□□□□□ -1.66
PTCSC3-201ENST00000556013 LINC00173Q6ZV60 143 aa4.69□□□□□ -1.66
PTCSC3-201ENST00000556013 FAM19A5Q7Z5A7 132 aaPredicted RBP4.69□□□□□ -1.66
PTCSC3-201ENST00000556013 KRTAP11-1Q8IUC1 163 aa4.69□□□□□ -1.66
PTCSC3-201ENST00000556013 PRR26Q8N8Z3 221 aa4.69□□□□□ -1.66
PTCSC3-201ENST00000556013 ALKBH7Q9BT30 221 aaPredicted RBP4.69□□□□□ -1.66
PTCSC3-201ENST00000556013 CTDSP1Q9GZU7 261 aa4.69□□□□□ -1.66
PTCSC3-201ENST00000556013 LPAP08519 4548 aa4.68□□□□□ -1.66
PTCSC3-201ENST00000556013 F8VRH5 84 aa4.68□□□□□ -1.66
PTCSC3-201ENST00000556013 SMCPP49901 116 aaPredicted RBP4.68□□□□□ -1.66
PTCSC3-201ENST00000556013 ERASQ7Z444 233 aa4.68□□□□□ -1.66
PTCSC3-201ENST00000556013 TOMM6Q96B49 74 aa4.68□□□□□ -1.66
PTCSC3-201ENST00000556013 C22orf24Q9Y442 160 aa4.68□□□□□ -1.66
PTCSC3-201ENST00000556013 COX19Q49B96 90 aa4.67□□□□□ -1.66
PTCSC3-201ENST00000556013 PDZD11Q5EBL8 140 aa4.67□□□□□ -1.66
PTCSC3-201ENST00000556013 GEMIN7Q9H840 131 aaKnown RBP4.67□□□□□ -1.66
PTCSC3-201ENST00000556013 TOMM7Q9P0U1 55 aa4.67□□□□□ -1.66
PTCSC3-201ENST00000556013 CDKN2A-AS1Q9UH64 79 aa4.67□□□□□ -1.66
PTCSC3-201ENST00000556013 IGLV5-45A0A087WSX0 123 aa4.66□□□□□ -1.66
PTCSC3-201ENST00000556013 LOC105371267A0A1B0GV96 52 aa4.66□□□□□ -1.66
PTCSC3-201ENST00000556013 TMEM238LA0A1B0GVL6 79 aa4.66□□□□□ -1.66
PTCSC3-201ENST00000556013 TINCRA0A1B0GVN0 87 aa4.66□□□□□ -1.66
PTCSC3-201ENST00000556013 LINC01546A6NGU7 62 aa4.66□□□□□ -1.66
PTCSC3-201ENST00000556013 CLLU1Q5K131 121 aa4.66□□□□□ -1.66
PTCSC3-201ENST00000556013 UQCC3Q6UW78 93 aa4.66□□□□□ -1.66
PTCSC3-201ENST00000556013 RPL28P46779 137 aaKnown RBP4.65□□□□□ -1.67
PTCSC3-201ENST00000556013 CTAG1AP78358 180 aa4.65□□□□□ -1.67
PTCSC3-201ENST00000556013 ZC2HC1BQ5TFG8 222 aa4.65□□□□□ -1.67
PTCSC3-201ENST00000556013 MRPL55Q7Z7F7 128 aaKnown RBP4.65□□□□□ -1.67
PTCSC3-201ENST00000556013 SCGB3A1Q96QR1 104 aa4.65□□□□□ -1.67
PTCSC3-201ENST00000556013 GNB1LQ9BYB4 327 aa4.65□□□□□ -1.67
PTCSC3-201ENST00000556013 MRPL18Q9H0U6 180 aaKnown RBP4.65□□□□□ -1.67
PTCSC3-201ENST00000556013 TMA7Q9Y2S6 64 aaKnown RBP4.65□□□□□ -1.67
PTCSC3-201ENST00000556013 XAGE1AQ9HD64 81 aa4.64□□□□□ -1.67
PTCSC3-201ENST00000556013 IGLV5-37A0A075B6J1 123 aa4.63□□□□□ -1.67
PTCSC3-201ENST00000556013 TMEM218A2RU14 115 aa4.63□□□□□ -1.67
PTCSC3-201ENST00000556013 SMIM1B2RUZ4 78 aa4.63□□□□□ -1.67
PTCSC3-201ENST00000556013 BCE1O60756 84 aa4.63□□□□□ -1.67
PTCSC3-201ENST00000556013 S100PP25815 95 aa4.63□□□□□ -1.67
PTCSC3-201ENST00000556013 PMVKQ15126 192 aa4.63□□□□□ -1.67
PTCSC3-201ENST00000556013 LINC00469Q8N7U9 141 aa4.63□□□□□ -1.67
PTCSC3-201ENST00000556013 COX7B2Q8TF08 81 aa4.63□□□□□ -1.67
PTCSC3-201ENST00000556013 CST9LQ9H4G1 147 aa4.63□□□□□ -1.67
PTCSC3-201ENST00000556013 H3BRM9 83 aa4.62□□□□□ -1.67
PTCSC3-201ENST00000556013 CRYGAP11844 174 aa4.62□□□□□ -1.67
PTCSC3-201ENST00000556013 KIAA1644Q3SXP7 199 aa4.62□□□□□ -1.67
PTCSC3-201ENST00000556013 LINC00167Q96N53 147 aa4.62□□□□□ -1.67
PTCSC3-201ENST00000556013 SEC11CQ9BY50 192 aa4.62□□□□□ -1.67
PTCSC3-201ENST00000556013 ADCYAP1P18509 176 aa4.61□□□□□ -1.67
PTCSC3-201ENST00000556013 COX17Q14061 63 aa4.61□□□□□ -1.67
PTCSC3-201ENST00000556013 COMMD7Q86VX2 200 aa4.61□□□□□ -1.67
PTCSC3-201ENST00000556013 ATP5LO75964 103 aa4.6□□□□□ -1.67
PTCSC3-201ENST00000556013 PRR4Q16378 134 aa4.6□□□□□ -1.67
PTCSC3-201ENST00000556013 FAM229BQ4G0N7 80 aa4.6□□□□□ -1.67
PTCSC3-201ENST00000556013 SFTA2Q6UW10 78 aa4.6□□□□□ -1.67
PTCSC3-201ENST00000556013 SMCO4Q9NRQ5 59 aa4.6□□□□□ -1.67
PTCSC3-201ENST00000556013 IGLV5-39A0A0G2JS06 123 aa4.59□□□□□ -1.67
PTCSC3-201ENST00000556013 IGLC3P0DOY3 106 aa4.59□□□□□ -1.67
PTCSC3-201ENST00000556013 RPL24P83731 157 aaKnown RBP4.59□□□□□ -1.67
PTCSC3-201ENST00000556013 FA2HQ7L5A8 372 aa4.59□□□□□ -1.67
PTCSC3-201ENST00000556013 KRTAP13-1Q8IUC0 172 aa4.59□□□□□ -1.67
PTCSC3-201ENST00000556013 NKAPP1Q8N9T2 125 aa4.59□□□□□ -1.67
PTCSC3-201ENST00000556013 TYMSOSQ8TAI1 123 aa4.59□□□□□ -1.67
PTCSC3-201ENST00000556013 A0A087X002 238 aa4.58□□□□□ -1.68
PTCSC3-201ENST00000556013 LINC00614P0C842 121 aa4.58□□□□□ -1.68
PTCSC3-201ENST00000556013 RAB5BP61020 215 aa4.58□□□□□ -1.68
PTCSC3-201ENST00000556013 FABP9Q0Z7S8 132 aa4.58□□□□□ -1.68
PTCSC3-201ENST00000556013 C10orf91Q5T1B1 145 aa4.58□□□□□ -1.68
PTCSC3-201ENST00000556013 A0A0U1RQV1 116 aa4.57□□□□□ -1.68
PTCSC3-201ENST00000556013 RPL37AP8A6NKH3 93 aa4.57□□□□□ -1.68
PTCSC3-201ENST00000556013 SPINK8P0C7L1 97 aa4.57□□□□□ -1.68
PTCSC3-201ENST00000556013 UBE2AP49459 152 aa4.57□□□□□ -1.68
PTCSC3-201ENST00000556013 RHEBQ15382 184 aa4.57□□□□□ -1.68
PTCSC3-201ENST00000556013 MUC2Q02817 5179 aa4.57□□□□□ -1.68
PTCSC3-201ENST00000556013 VPREB1P12018 145 aa4.56□□□□□ -1.68
PTCSC3-201ENST00000556013 ZNF22P17026 224 aaPredicted RBP4.56□□□□□ -1.68
PTCSC3-201ENST00000556013 ERG28Q9UKR5 140 aa4.56□□□□□ -1.68
PTCSC3-201ENST00000556013 A0A096LNJ9 63 aa4.55□□□□□ -1.68
PTCSC3-201ENST00000556013 GAGE10A6NGK3 116 aa4.55□□□□□ -1.68
PTCSC3-201ENST00000556013 TSPAN13O95857 204 aa4.55□□□□□ -1.68
PTCSC3-201ENST00000556013 HBDP02042 147 aa4.55□□□□□ -1.68
PTCSC3-201ENST00000556013 S100A12P80511 92 aa4.55□□□□□ -1.68
PTCSC3-201ENST00000556013 SND1-IT1Q9HBX3 110 aa4.55□□□□□ -1.68
PTCSC3-201ENST00000556013 IGKV2D-26A0A0A0MRZ7 120 aa4.54□□□□□ -1.68
PTCSC3-201ENST00000556013 SCO1O75880 301 aa4.54□□□□□ -1.68
PTCSC3-201ENST00000556013 PFN2P35080 140 aa4.54□□□□□ -1.68
PTCSC3-201ENST00000556013 KRTAP13-2Q52LG2 175 aa4.54□□□□□ -1.68
PTCSC3-201ENST00000556013 SPAG11AQ6PDA7 123 aa4.54□□□□□ -1.68
PTCSC3-201ENST00000556013 BAGE3Q86Y29 109 aa4.54□□□□□ -1.68
PTCSC3-201ENST00000556013 LINC00304Q8N9R0 145 aa4.54□□□□□ -1.68
PTCSC3-201ENST00000556013 C18orf32Q8TCD1 76 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms