RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 DEFB4AO15263 64 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 TRIAP1O43715 76 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 INSP01308 110 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 PRM2P04554 102 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 CRYGDP07320 174 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 TSPEAR-AS2P59090 65 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 Q1RN00 199 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 SERTAD4-AS1Q5TG53 156 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 Q5XG85 94 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 Q6ZTC4 211 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 LINC00643Q86TS7 51 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 C14orf178Q8N769 122 aaPredicted RBP2.75□□□□□ -1.97
LINC00648-202ENST00000555985 Q8TAT8 98 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 LINC00477Q96M19 166 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 LENEPQ9Y5L5 61 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 IGLV4-69A0A075B6H9 119 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.74□□□□□ -1.97
LINC00648-202ENST00000555985 OXTP01178 125 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 TRACP01848 142 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 TMEM258P61165 79 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 HRCT1Q6UXD1 115 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 C2orf66Q6UXQ4 117 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 C5orf38Q86SI9 138 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 TRAV12-2A0A075B6T6 113 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 hADV29S1A0JD25 119 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 TMEM223A0PJW6 202 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 LYRM9A8MSI8 78 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 IGKV3-20P01619 116 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 CXCL5P42830 114 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 DAZ2Q13117 558 aaKnown RBP2.74□□□□□ -1.97
LINC00648-202ENST00000555985 MUSTN1Q8IVN3 82 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 SMCR5Q8TEV8 140 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 IGHV4-4A0A075B6R2 117 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 TRAV10A0A0B4J240 114 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 IGKV3D-20A0A0C4DH25 116 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 J3QQQ9 107 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 SUMO2P61956 95 aaKnown RBP2.73□□□□□ -1.97
LINC00648-202ENST00000555985 HIST1H4AP62805 103 aaKnown RBP2.73□□□□□ -1.97
LINC00648-202ENST00000555985 FAM222AQ5U5X8 452 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 SDIM1Q6ZPB5 146 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 C16orf74Q96GX8 76 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 CYSTM1Q9H1C7 97 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 ATOX1O00244 68 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 SPART-AS1P0CW21 52 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 LGALS3P17931 250 aaKnown RBP2.73□□□□□ -1.97
LINC00648-202ENST00000555985 ICOSQ9Y6W8 199 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 LST1O00453 97 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 TSHBP01222 138 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 COX6CP09669 75 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 VPREB1P12018 145 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 C11orf21Q9P2W6 132 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 DNAH5Q8TE73 4624 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 NACAE9PAV3 2078 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 IGIPA6NJ69 53 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 H3BNG1 76 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 SPANXN1Q5VSR9 72 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 DSCR8Q96T75 97 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 JPT2Q9H910 190 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 PRO0628Q9UI54 55 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 PYGO1Q9Y3Y4 419 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 DEFB131BA0A096LNP1 70 aa2.71□□□□□ -1.97
LINC00648-202ENST00000555985 LEPROTO15243 131 aa2.71□□□□□ -1.97
LINC00648-202ENST00000555985 CLEC2BQ92478 149 aa2.71□□□□□ -1.97
LINC00648-202ENST00000555985 UPK3BQ9BT76 320 aa2.71□□□□□ -1.97
LINC00648-202ENST00000555985 KRTAP4-5Q9BYR2 181 aa2.71□□□□□ -1.97
LINC00648-202ENST00000555985 TRAV13-1A0A0B4J241 112 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 TRAV12-3A0A0B4J271 114 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 SDHAF1A6NFY7 115 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 M0R381 172 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 ZNF876PQ49A33 203 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 Q6ZR54 194 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 RPL39LQ96EH5 51 aaKnown RBP2.71□□□□□ -1.98
LINC00648-202ENST00000555985 TMEM141Q96I45 108 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 IGHV1OR15-1A0A075B7D0 117 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 TRAV8-3A0A0A6YYJ7 113 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 RS1O15537 224 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 RPL18AQ02543 176 aaKnown RBP2.71□□□□□ -1.98
LINC00648-202ENST00000555985 RHOHQ15669 191 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 SERP2Q8N6R1 65 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 TIMM21Q9BVV7 248 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 DPH3P1Q9H4G8 78 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 DNAH8Q96JB1 4490 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 IGHV3OR16-12A0A075B7B8 117 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 IGHV3-16A0A0C4DH30 117 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 A0A0J9YXY3 114 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 TINCRA0A1B0GVN0 87 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 A0A1B0GVY2 172 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 I3L3M4 83 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 RNASE4P34096 147 aaKnown RBP2.7□□□□□ -1.98
LINC00648-202ENST00000555985 C6orf226Q5I0X4 101 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 VSIG2Q96IQ7 327 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 C9orf85Q96MD7 179 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 TIMM17AQ99595 171 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 HERC2O95714 4834 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 PPP1R17O96001 155 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 Q6ZTI0 123 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 LINC00336Q6ZUF6 198 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 LITAFQ99732 161 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 NOP10Q9NPE3 64 aaKnown RBP2.7□□□□□ -1.98
LINC00648-202ENST00000555985 RNASE3P12724 160 aaKnown RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 292.1 ms