RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 LINC01549A6NIU2 74 aa9.41□□□□□ -0.9
SNX6-205ENST00000555648 ERASQ7Z444 233 aa9.41□□□□□ -0.9
SNX6-205ENST00000555648 FAM19A3Q7Z5A8 133 aa9.41□□□□□ -0.9
SNX6-205ENST00000555648 CDKN2A-AS1Q9UH64 79 aa9.41□□□□□ -0.9
SNX6-205ENST00000555648 H0Y9J4 135 aa9.4□□□□□ -0.9
SNX6-205ENST00000555648 CXCL5P42830 114 aa9.4□□□□□ -0.9
SNX6-205ENST00000555648 C9orf129Q5T035 196 aaKnown RBP9.4□□□□□ -0.9
SNX6-205ENST00000555648 LINC00469Q8N7U9 141 aa9.4□□□□□ -0.9
SNX6-205ENST00000555648 F8VRH5 84 aa9.39□□□□□ -0.91
SNX6-205ENST00000555648 ADCYAP1P18509 176 aa9.39□□□□□ -0.91
SNX6-205ENST00000555648 COX19Q49B96 90 aa9.39□□□□□ -0.91
SNX6-205ENST00000555648 LBHQ53QV2 105 aaPredicted RBP9.39□□□□□ -0.91
SNX6-205ENST00000555648 GNB1LQ9BYB4 327 aa9.39□□□□□ -0.91
SNX6-205ENST00000555648 FA2HQ7L5A8 372 aa9.38□□□□□ -0.91
SNX6-205ENST00000555648 KRTAP11-1Q8IUC1 163 aa9.38□□□□□ -0.91
SNX6-205ENST00000555648 PRR26Q8N8Z3 221 aa9.38□□□□□ -0.91
SNX6-205ENST00000555648 SEC11CQ9BY50 192 aa9.38□□□□□ -0.91
SNX6-205ENST00000555648 XAGE1AQ9HD64 81 aa9.38□□□□□ -0.91
SNX6-205ENST00000555648 SMCO4Q9NRQ5 59 aa9.38□□□□□ -0.91
SNX6-205ENST00000555648 KRTAP7-1Q8IUC3 87 aa9.37□□□□□ -0.91
SNX6-205ENST00000555648 TINCRA0A1B0GVN0 87 aa9.36□□□□□ -0.91
SNX6-205ENST00000555648 FABP9Q0Z7S8 132 aa9.36□□□□□ -0.91
SNX6-205ENST00000555648 C22orf24Q9Y442 160 aa9.36□□□□□ -0.91
SNX6-205ENST00000555648 IGLV1-50A0A075B6I6 118 aa9.35□□□□□ -0.91
SNX6-205ENST00000555648 PDZD11Q5EBL8 140 aa9.35□□□□□ -0.91
SNX6-205ENST00000555648 NUPR1O60356 82 aa9.34□□□□□ -0.91
SNX6-205ENST00000555648 COMMD7Q86VX2 200 aa9.34□□□□□ -0.91
SNX6-205ENST00000555648 COX7B2Q8TF08 81 aa9.34□□□□□ -0.91
SNX6-205ENST00000555648 CST9LQ9H4G1 147 aa9.34□□□□□ -0.91
SNX6-205ENST00000555648 SMIM1B2RUZ4 78 aa9.33□□□□□ -0.92
SNX6-205ENST00000555648 H3BRM9 83 aa9.33□□□□□ -0.92
SNX6-205ENST00000555648 PMVKQ15126 192 aa9.33□□□□□ -0.92
SNX6-205ENST00000555648 MRPL18Q9H0U6 180 aaKnown RBP9.33□□□□□ -0.92
SNX6-205ENST00000555648 RPS10P5Q9NQ39 176 aa9.33□□□□□ -0.92
SNX6-205ENST00000555648 RPL13AP40429 203 aaKnown RBP9.32□□□□□ -0.92
SNX6-205ENST00000555648 IFITM2Q01629 132 aa9.32□□□□□ -0.92
SNX6-205ENST00000555648 MRPL55Q7Z7F7 128 aaKnown RBP9.32□□□□□ -0.92
SNX6-205ENST00000555648 LINC01546A6NGU7 62 aa9.31□□□□□ -0.92
SNX6-205ENST00000555648 ZNF861PO60384 105 aa9.31□□□□□ -0.92
SNX6-205ENST00000555648 SPINK8P0C7L1 97 aa9.31□□□□□ -0.92
SNX6-205ENST00000555648 NDUFA6P56556 154 aa9.31□□□□□ -0.92
SNX6-205ENST00000555648 RHEBQ15382 184 aa9.31□□□□□ -0.92
SNX6-205ENST00000555648 TP73-AS1Q9UF72 201 aa9.31□□□□□ -0.92
SNX6-205ENST00000555648 IGLV5-45A0A087WSX0 123 aa9.3□□□□□ -0.92
SNX6-205ENST00000555648 ATP5LO75964 103 aa9.3□□□□□ -0.92
SNX6-205ENST00000555648 RAB5BP61020 215 aa9.3□□□□□ -0.92
SNX6-205ENST00000555648 RPL28P46779 137 aaKnown RBP9.29□□□□□ -0.92
SNX6-205ENST00000555648 TNXBP22105 4242 aa9.29□□□□□ -0.92
SNX6-205ENST00000555648 UBR4Q5T4S7 5183 aa9.29□□□□□ -0.92
SNX6-205ENST00000555648 NKAPP1Q8N9T2 125 aa9.28□□□□□ -0.92
SNX6-205ENST00000555648 KRTAP1-4P0C5Y4 121 aa9.27□□□□□ -0.93
SNX6-205ENST00000555648 CARHSP1Q9Y2V2 147 aaKnown RBP9.27□□□□□ -0.93
SNX6-205ENST00000555648 TRAPPC1Q9Y5R8 145 aa9.27□□□□□ -0.93
SNX6-205ENST00000555648 GAGE10A6NGK3 116 aa9.26□□□□□ -0.93
SNX6-205ENST00000555648 RPL37AP8A6NKH3 93 aa9.26□□□□□ -0.93
SNX6-205ENST00000555648 BCE1O60756 84 aa9.26□□□□□ -0.93
SNX6-205ENST00000555648 C10orf91Q5T1B1 145 aa9.25□□□□□ -0.93
SNX6-205ENST00000555648 LINC00167Q96N53 147 aa9.25□□□□□ -0.93
SNX6-205ENST00000555648 HBDP02042 147 aa9.24□□□□□ -0.93
SNX6-205ENST00000555648 LINC00614P0C842 121 aa9.24□□□□□ -0.93
SNX6-205ENST00000555648 IGLC3P0DOY3 106 aa9.24□□□□□ -0.93
SNX6-205ENST00000555648 PFN2P35080 140 aa9.23□□□□□ -0.93
SNX6-205ENST00000555648 UBE2AP49459 152 aa9.23□□□□□ -0.93
SNX6-205ENST00000555648 NDUFA5Q16718 116 aa9.23□□□□□ -0.93
SNX6-205ENST00000555648 C18orf32Q8TCD1 76 aa9.22□□□□□ -0.93
SNX6-205ENST00000555648 APOC3P02656 99 aa9.21□□□□□ -0.94
SNX6-205ENST00000555648 PRR4Q16378 134 aa9.21□□□□□ -0.94
SNX6-205ENST00000555648 IGLV5-37A0A075B6J1 123 aa9.2□□□□□ -0.94
SNX6-205ENST00000555648 CRYGAP11844 174 aa9.2□□□□□ -0.94
SNX6-205ENST00000555648 ZNF22P17026 224 aaPredicted RBP9.2□□□□□ -0.94
SNX6-205ENST00000555648 PMCHL1Q16048 86 aa9.2□□□□□ -0.94
SNX6-205ENST00000555648 TMEM170BQ5T4T1 132 aa9.2□□□□□ -0.94
SNX6-205ENST00000555648 BAGE3Q86Y29 109 aa9.2□□□□□ -0.94
SNX6-205ENST00000555648 IGLV5-39A0A0G2JS06 123 aa9.19□□□□□ -0.94
SNX6-205ENST00000555648 SNAPINO95295 136 aa9.19□□□□□ -0.94
SNX6-205ENST00000555648 RPL24P83731 157 aaKnown RBP9.19□□□□□ -0.94
SNX6-205ENST00000555648 SFTA2Q6UW10 78 aa9.19□□□□□ -0.94
SNX6-205ENST00000555648 SVBPQ8N300 66 aa9.19□□□□□ -0.94
SNX6-205ENST00000555648 ERG28Q9UKR5 140 aa9.19□□□□□ -0.94
SNX6-205ENST00000555648 IGKV2-28A0A075B6P5 120 aa9.18□□□□□ -0.94
SNX6-205ENST00000555648 A0A096LNJ9 63 aa9.18□□□□□ -0.94
SNX6-205ENST00000555648 IGKV2D-28P01615 120 aa9.18□□□□□ -0.94
SNX6-205ENST00000555648 COX17Q14061 63 aa9.18□□□□□ -0.94
SNX6-205ENST00000555648 TYMSOSQ8TAI1 123 aa9.18□□□□□ -0.94
SNX6-205ENST00000555648 TSPAN13O95857 204 aa9.17□□□□□ -0.94
SNX6-205ENST00000555648 URB1-AS1Q96HZ7 61 aa9.17□□□□□ -0.94
SNX6-205ENST00000555648 ZNF625Q96I27 306 aaPredicted RBP9.17□□□□□ -0.94
SNX6-205ENST00000555648 SND1-IT1Q9HBX3 110 aa9.17□□□□□ -0.94
SNX6-205ENST00000555648 LRP2P98164 4655 aa9.17□□□□□ -0.94
SNX6-205ENST00000555648 C11orf86A6NJI1 115 aa9.15□□□□□ -0.94
SNX6-205ENST00000555648 SCO1O75880 301 aa9.15□□□□□ -0.94
SNX6-205ENST00000555648 CHTOPQ9Y3Y2 248 aaKnown RBP9.15□□□□□ -0.94
SNX6-205ENST00000555648 LINC00158P58513 81 aa9.14□□□□□ -0.95
SNX6-205ENST00000555648 FAM19A1Q7Z5A9 133 aa9.14□□□□□ -0.95
SNX6-205ENST00000555648 A0A087X002 238 aa9.13□□□□□ -0.95
SNX6-205ENST00000555648 ATP6V1G1O75348 118 aa9.13□□□□□ -0.95
SNX6-205ENST00000555648 VPREB1P12018 145 aa9.12□□□□□ -0.95
SNX6-205ENST00000555648 CHCHD1Q96BP2 118 aaKnown RBP9.12□□□□□ -0.95
SNX6-205ENST00000555648 ANAPC11Q9NYG5 84 aa9.12□□□□□ -0.95
SNX6-205ENST00000555648 PRLHP81277 87 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms