RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 XAGE1AQ9HD64 81 aa13.25□□□□□ -0.29
GABRB3-206ENST00000554556 IGIPA6NJ69 53 aa13.24□□□□□ -0.29
GABRB3-206ENST00000554556 ANAPC16Q96DE5 110 aa13.24□□□□□ -0.29
GABRB3-206ENST00000554556 CTDSP1Q9GZU7 261 aa13.24□□□□□ -0.29
GABRB3-206ENST00000554556 TP73-AS1Q9UF72 201 aa13.24□□□□□ -0.29
GABRB3-206ENST00000554556 F8VRH5 84 aa13.23□□□□□ -0.29
GABRB3-206ENST00000554556 PNRC1Q12796 327 aaPredicted RBP13.23□□□□□ -0.29
GABRB3-206ENST00000554556 GEMIN7Q9H840 131 aaKnown RBP13.23□□□□□ -0.29
GABRB3-206ENST00000554556 NXT2Q9NPJ8 142 aaKnown RBP13.23□□□□□ -0.29
GABRB3-206ENST00000554556 MT-ND4LP03901 98 aa13.22□□□□□ -0.29
GABRB3-206ENST00000554556 RPL28P46779 137 aaKnown RBP13.22□□□□□ -0.29
GABRB3-206ENST00000554556 CXCL5P42830 114 aa13.21□□□□□ -0.29
GABRB3-206ENST00000554556 MRPL55Q7Z7F7 128 aaKnown RBP13.21□□□□□ -0.29
GABRB3-206ENST00000554556 CDKN2A-AS1Q9UH64 79 aa13.21□□□□□ -0.29
GABRB3-206ENST00000554556 A0A0U1RQV1 116 aa13.19□□□□□ -0.3
GABRB3-206ENST00000554556 TSPAN13O95857 204 aa13.19□□□□□ -0.3
GABRB3-206ENST00000554556 BCE1O60756 84 aa13.18□□□□□ -0.3
GABRB3-206ENST00000554556 TIMM17AQ99595 171 aa13.18□□□□□ -0.3
GABRB3-206ENST00000554556 A0A1B0GVG6 124 aa13.17□□□□□ -0.3
GABRB3-206ENST00000554556 CRYGAP11844 174 aa13.17□□□□□ -0.3
GABRB3-206ENST00000554556 TYMSOSQ8TAI1 123 aa13.16□□□□□ -0.3
GABRB3-206ENST00000554556 TOMM6Q96B49 74 aa13.15□□□□□ -0.3
GABRB3-206ENST00000554556 LINC00167Q96N53 147 aa13.14□□□□□ -0.31
GABRB3-206ENST00000554556 A0A087X002 238 aa13.13□□□□□ -0.31
GABRB3-206ENST00000554556 PDZD11Q5EBL8 140 aa13.13□□□□□ -0.31
GABRB3-206ENST00000554556 ERASQ7Z444 233 aa13.13□□□□□ -0.31
GABRB3-206ENST00000554556 RPL37AP8A6NKH3 93 aa13.12□□□□□ -0.31
GABRB3-206ENST00000554556 SCGB3A1Q96QR1 104 aa13.12□□□□□ -0.31
GABRB3-206ENST00000554556 SMIM1B2RUZ4 78 aa13.11□□□□□ -0.31
GABRB3-206ENST00000554556 COX7B2Q8TF08 81 aa13.11□□□□□ -0.31
GABRB3-206ENST00000554556 TINCRA0A1B0GVN0 87 aa13.1□□□□□ -0.31
GABRB3-206ENST00000554556 LINC01549A6NIU2 74 aa13.09□□□□□ -0.31
GABRB3-206ENST00000554556 GAGE10A6NGK3 116 aa13.07□□□□□ -0.32
GABRB3-206ENST00000554556 UBE2AP49459 152 aa13.07□□□□□ -0.32
GABRB3-206ENST00000554556 RAB14P61106 215 aa13.07□□□□□ -0.32
GABRB3-206ENST00000554556 KIAA1644Q3SXP7 199 aa13.07□□□□□ -0.32
GABRB3-206ENST00000554556 NKAPP1Q8N9T2 125 aa13.07□□□□□ -0.32
GABRB3-206ENST00000554556 IGLV5-37A0A075B6J1 123 aa13.06□□□□□ -0.32
GABRB3-206ENST00000554556 IGLV5-45A0A087WSX0 123 aa13.06□□□□□ -0.32
GABRB3-206ENST00000554556 RAB5BP61020 215 aa13.05□□□□□ -0.32
GABRB3-206ENST00000554556 ADCYAP1P18509 176 aa13.03□□□□□ -0.32
GABRB3-206ENST00000554556 FAM229BQ4G0N7 80 aa13.03□□□□□ -0.32
GABRB3-206ENST00000554556 MRPL18Q9H0U6 180 aaKnown RBP13.03□□□□□ -0.32
GABRB3-206ENST00000554556 CST9LQ9H4G1 147 aa13.03□□□□□ -0.32
GABRB3-206ENST00000554556 ANAPC11Q9NYG5 84 aa13.03□□□□□ -0.32
GABRB3-206ENST00000554556 SPINK8P0C7L1 97 aa13.02□□□□□ -0.33
GABRB3-206ENST00000554556 ATP5LO75964 103 aa13.01□□□□□ -0.33
GABRB3-206ENST00000554556 KRTAP13-1Q8IUC0 172 aa13.01□□□□□ -0.33
GABRB3-206ENST00000554556 TRAV9-1A0A075B6T8 112 aa13□□□□□ -0.33
GABRB3-206ENST00000554556 H3BRM9 83 aa13□□□□□ -0.33
GABRB3-206ENST00000554556 PMVKQ15126 192 aa13□□□□□ -0.33
GABRB3-206ENST00000554556 KRTAP13-2Q52LG2 175 aa13□□□□□ -0.33
GABRB3-206ENST00000554556 LINC00304Q8N9R0 145 aa12.99□□□□□ -0.33
GABRB3-206ENST00000554556 LINC01546A6NGU7 62 aa12.98□□□□□ -0.33
GABRB3-206ENST00000554556 IGKV2-28A0A075B6P5 120 aa12.97□□□□□ -0.33
GABRB3-206ENST00000554556 IGKV2D-26A0A0A0MRZ7 120 aa12.97□□□□□ -0.33
GABRB3-206ENST00000554556 IGKV2D-28P01615 120 aa12.97□□□□□ -0.33
GABRB3-206ENST00000554556 MUC2Q02817 5179 aa12.96□□□□□ -0.33
GABRB3-206ENST00000554556 PFN2P35080 140 aa12.95□□□□□ -0.34
GABRB3-206ENST00000554556 CTAG1AP78358 180 aa12.95□□□□□ -0.34
GABRB3-206ENST00000554556 FA2HQ7L5A8 372 aa12.95□□□□□ -0.34
GABRB3-206ENST00000554556 GNB1LQ9BYB4 327 aa12.95□□□□□ -0.34
GABRB3-206ENST00000554556 SMCO4Q9NRQ5 59 aa12.95□□□□□ -0.34
GABRB3-206ENST00000554556 S100PP25815 95 aa12.94□□□□□ -0.34
GABRB3-206ENST00000554556 RETNLBQ9BQ08 111 aa12.94□□□□□ -0.34
GABRB3-206ENST00000554556 SCO1O75880 301 aa12.93□□□□□ -0.34
GABRB3-206ENST00000554556 RPL24P83731 157 aaKnown RBP12.93□□□□□ -0.34
GABRB3-206ENST00000554556 FAM19A1Q7Z5A9 133 aa12.93□□□□□ -0.34
GABRB3-206ENST00000554556 COX19Q49B96 90 aa12.92□□□□□ -0.34
GABRB3-206ENST00000554556 CDIP1Q9H305 208 aa12.92□□□□□ -0.34
GABRB3-206ENST00000554556 PRLHP81277 87 aa12.91□□□□□ -0.34
GABRB3-206ENST00000554556 VPREB1P12018 145 aa12.9□□□□□ -0.34
GABRB3-206ENST00000554556 COX17Q14061 63 aa12.9□□□□□ -0.34
GABRB3-206ENST00000554556 TMEM126AQ9H061 195 aa12.9□□□□□ -0.34
GABRB3-206ENST00000554556 SND1-IT1Q9HBX3 110 aa12.9□□□□□ -0.34
GABRB3-206ENST00000554556 IGLV7-46A0A075B6I9 117 aa12.89□□□□□ -0.35
GABRB3-206ENST00000554556 IGLV5-39A0A0G2JS06 123 aa12.89□□□□□ -0.35
GABRB3-206ENST00000554556 IGLC3P0DOY3 106 aa12.89□□□□□ -0.35
GABRB3-206ENST00000554556 NDUFA6P56556 154 aa12.89□□□□□ -0.35
GABRB3-206ENST00000554556 TPRXLQ17RH7 258 aa12.89□□□□□ -0.35
GABRB3-206ENST00000554556 CLLU1Q5K131 121 aa12.89□□□□□ -0.35
GABRB3-206ENST00000554556 KRTAP9-2Q9BYQ4 174 aa12.89□□□□□ -0.35
GABRB3-206ENST00000554556 ERG28Q9UKR5 140 aa12.89□□□□□ -0.35
GABRB3-206ENST00000554556 UQCC3Q6UW78 93 aa12.88□□□□□ -0.35
GABRB3-206ENST00000554556 TMEM218A2RU14 115 aa12.87□□□□□ -0.35
GABRB3-206ENST00000554556 TMEM238C9JI98 176 aa12.87□□□□□ -0.35
GABRB3-206ENST00000554556 FABP9Q0Z7S8 132 aa12.87□□□□□ -0.35
GABRB3-206ENST00000554556 ZNF22P17026 224 aaPredicted RBP12.85□□□□□ -0.35
GABRB3-206ENST00000554556 LCE2AQ5TA79 106 aaPredicted RBP12.85□□□□□ -0.35
GABRB3-206ENST00000554556 SFTA2Q6UW10 78 aa12.85□□□□□ -0.35
GABRB3-206ENST00000554556 CBLN2Q8IUK8 224 aa12.85□□□□□ -0.35
GABRB3-206ENST00000554556 PLEKHB2Q96CS7 222 aa12.85□□□□□ -0.35
GABRB3-206ENST00000554556 M0R378 163 aa12.84□□□□□ -0.35
GABRB3-206ENST00000554556 ZNF625Q96I27 306 aaPredicted RBP12.83□□□□□ -0.36
GABRB3-206ENST00000554556 SPAG11AQ6PDA7 123 aa12.82□□□□□ -0.36
GABRB3-206ENST00000554556 SEC11CQ9BY50 192 aa12.81□□□□□ -0.36
GABRB3-206ENST00000554556 C3orf22Q8N5N4 141 aa12.8□□□□□ -0.36
GABRB3-206ENST00000554556 HIGD2AQ9BW72 106 aa12.8□□□□□ -0.36
GABRB3-206ENST00000554556 PPDPFQ9H3Y8 114 aa12.79□□□□□ -0.36
GABRB3-206ENST00000554556 HBDP02042 147 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms