RNA–Protein interactions for RNA: ENST00000553338.1

IFT43-204, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 684 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-204ENST00000553338 KRTAP7-1Q8IUC3 87 aa11.91□□□□□ -0.5
IFT43-204ENST00000553338 C9orf129Q5T035 196 aaKnown RBP11.9□□□□□ -0.5
IFT43-204ENST00000553338 Q8IZM0 81 aa11.9□□□□□ -0.5
IFT43-204ENST00000553338 SCGB3A1Q96QR1 104 aa11.9□□□□□ -0.5
IFT43-204ENST00000553338 SEC11CQ9BY50 192 aa11.9□□□□□ -0.5
IFT43-204ENST00000553338 CDKN2A-AS1Q9UH64 79 aa11.9□□□□□ -0.5
IFT43-204ENST00000553338 ERASQ7Z444 233 aa11.89□□□□□ -0.51
IFT43-204ENST00000553338 DIRC1Q969H9 104 aa11.89□□□□□ -0.51
IFT43-204ENST00000553338 GNB1LQ9BYB4 327 aa11.89□□□□□ -0.51
IFT43-204ENST00000553338 LINC00469Q8N7U9 141 aa11.87□□□□□ -0.51
IFT43-204ENST00000553338 COMMD7Q86VX2 200 aa11.86□□□□□ -0.51
IFT43-204ENST00000553338 F8VRH5 84 aa11.84□□□□□ -0.51
IFT43-204ENST00000553338 H0Y9J4 135 aa11.84□□□□□ -0.51
IFT43-204ENST00000553338 LINC01546A6NGU7 62 aa11.83□□□□□ -0.52
IFT43-204ENST00000553338 LINC01549A6NIU2 74 aa11.83□□□□□ -0.52
IFT43-204ENST00000553338 CXCL5P42830 114 aa11.83□□□□□ -0.52
IFT43-204ENST00000553338 COX19Q49B96 90 aa11.83□□□□□ -0.52
IFT43-204ENST00000553338 FA2HQ7L5A8 372 aa11.83□□□□□ -0.52
IFT43-204ENST00000553338 MRPL18Q9H0U6 180 aaKnown RBP11.83□□□□□ -0.52
IFT43-204ENST00000553338 XAGE1AQ9HD64 81 aa11.83□□□□□ -0.52
IFT43-204ENST00000553338 TINCRA0A1B0GVN0 87 aa11.82□□□□□ -0.52
IFT43-204ENST00000553338 SMIM1B2RUZ4 78 aa11.82□□□□□ -0.52
IFT43-204ENST00000553338 FABP9Q0Z7S8 132 aa11.82□□□□□ -0.52
IFT43-204ENST00000553338 PRR26Q8N8Z3 221 aa11.82□□□□□ -0.52
IFT43-204ENST00000553338 SMCO4Q9NRQ5 59 aa11.82□□□□□ -0.52
IFT43-204ENST00000553338 RPS10P5Q9NQ39 176 aa11.81□□□□□ -0.52
IFT43-204ENST00000553338 RHEBQ15382 184 aa11.8□□□□□ -0.52
IFT43-204ENST00000553338 PDZD11Q5EBL8 140 aa11.8□□□□□ -0.52
IFT43-204ENST00000553338 COX7B2Q8TF08 81 aa11.8□□□□□ -0.52
IFT43-204ENST00000553338 CST9LQ9H4G1 147 aa11.8□□□□□ -0.52
IFT43-204ENST00000553338 C22orf24Q9Y442 160 aa11.8□□□□□ -0.52
IFT43-204ENST00000553338 IGLV5-45A0A087WSX0 123 aa11.78□□□□□ -0.52
IFT43-204ENST00000553338 SPINK8P0C7L1 97 aa11.78□□□□□ -0.52
IFT43-204ENST00000553338 PMVKQ15126 192 aa11.78□□□□□ -0.52
IFT43-204ENST00000553338 LBHQ53QV2 105 aaPredicted RBP11.78□□□□□ -0.52
IFT43-204ENST00000553338 C10orf91Q5T1B1 145 aa11.78□□□□□ -0.52
IFT43-204ENST00000553338 CARHSP1Q9Y2V2 147 aaKnown RBP11.77□□□□□ -0.53
IFT43-204ENST00000553338 IGLV1-50A0A075B6I6 118 aa11.74□□□□□ -0.53
IFT43-204ENST00000553338 NUPR1O60356 82 aa11.74□□□□□ -0.53
IFT43-204ENST00000553338 KRTAP1-4P0C5Y4 121 aa11.74□□□□□ -0.53
IFT43-204ENST00000553338 MRPL55Q7Z7F7 128 aaKnown RBP11.74□□□□□ -0.53
IFT43-204ENST00000553338 LRP2P98164 4655 aa11.74□□□□□ -0.53
IFT43-204ENST00000553338 H3BRM9 83 aa11.73□□□□□ -0.53
IFT43-204ENST00000553338 ZNF861PO60384 105 aa11.73□□□□□ -0.53
IFT43-204ENST00000553338 NDUFA6P56556 154 aa11.73□□□□□ -0.53
IFT43-204ENST00000553338 RAB5BP61020 215 aa11.73□□□□□ -0.53
IFT43-204ENST00000553338 TP73-AS1Q9UF72 201 aa11.73□□□□□ -0.53
IFT43-204ENST00000553338 TRAPPC1Q9Y5R8 145 aa11.73□□□□□ -0.53
IFT43-204ENST00000553338 A0A096LNJ9 63 aa11.7□□□□□ -0.54
IFT43-204ENST00000553338 C18orf32Q8TCD1 76 aa11.7□□□□□ -0.54
IFT43-204ENST00000553338 ATP5LO75964 103 aa11.69□□□□□ -0.54
IFT43-204ENST00000553338 LINC00614P0C842 121 aa11.69□□□□□ -0.54
IFT43-204ENST00000553338 IGLC3P0DOY3 106 aa11.69□□□□□ -0.54
IFT43-204ENST00000553338 URB1-AS1Q96HZ7 61 aa11.69□□□□□ -0.54
IFT43-204ENST00000553338 GAGE10A6NGK3 116 aa11.68□□□□□ -0.54
IFT43-204ENST00000553338 RPL37AP8A6NKH3 93 aa11.68□□□□□ -0.54
IFT43-204ENST00000553338 HBDP02042 147 aa11.68□□□□□ -0.54
IFT43-204ENST00000553338 RPL13AP40429 203 aaKnown RBP11.68□□□□□ -0.54
IFT43-204ENST00000553338 PMCHL1Q16048 86 aa11.68□□□□□ -0.54
IFT43-204ENST00000553338 LINC00167Q96N53 147 aa11.68□□□□□ -0.54
IFT43-204ENST00000553338 BCE1O60756 84 aa11.67□□□□□ -0.54
IFT43-204ENST00000553338 APOC3P02656 99 aa11.67□□□□□ -0.54
IFT43-204ENST00000553338 RPL28P46779 137 aaKnown RBP11.66□□□□□ -0.54
IFT43-204ENST00000553338 NKAPP1Q8N9T2 125 aa11.66□□□□□ -0.54
IFT43-204ENST00000553338 IGLV5-39A0A0G2JS06 123 aa11.65□□□□□ -0.54
IFT43-204ENST00000553338 ZNF22P17026 224 aaPredicted RBP11.65□□□□□ -0.54
IFT43-204ENST00000553338 PFN2P35080 140 aa11.65□□□□□ -0.54
IFT43-204ENST00000553338 IGLV5-37A0A075B6J1 123 aa11.64□□□□□ -0.55
IFT43-204ENST00000553338 NDUFA5Q16718 116 aa11.64□□□□□ -0.55
IFT43-204ENST00000553338 SNAPINO95295 136 aa11.63□□□□□ -0.55
IFT43-204ENST00000553338 SVBPQ8N300 66 aa11.63□□□□□ -0.55
IFT43-204ENST00000553338 BAGE3Q86Y29 109 aa11.61□□□□□ -0.55
IFT43-204ENST00000553338 ERG28Q9UKR5 140 aa11.61□□□□□ -0.55
IFT43-204ENST00000553338 C11orf86A6NJI1 115 aa11.6□□□□□ -0.55
IFT43-204ENST00000553338 SCO1O75880 301 aa11.6□□□□□ -0.55
IFT43-204ENST00000553338 TMEM170BQ5T4T1 132 aa11.6□□□□□ -0.55
IFT43-204ENST00000553338 IGKV2-28A0A075B6P5 120 aa11.59□□□□□ -0.55
IFT43-204ENST00000553338 IGKV2D-28P01615 120 aa11.59□□□□□ -0.55
IFT43-204ENST00000553338 UBE2AP49459 152 aa11.59□□□□□ -0.55
IFT43-204ENST00000553338 ZNF625Q96I27 306 aaPredicted RBP11.59□□□□□ -0.55
IFT43-204ENST00000553338 RNF213Q63HN8 5207 aa11.58□□□□□ -0.56
IFT43-204ENST00000553338 SND1-IT1Q9HBX3 110 aa11.58□□□□□ -0.56
IFT43-204ENST00000553338 COX17Q14061 63 aa11.57□□□□□ -0.56
IFT43-204ENST00000553338 CHTOPQ9Y3Y2 248 aaKnown RBP11.57□□□□□ -0.56
IFT43-204ENST00000553338 A0A087X002 238 aa11.55□□□□□ -0.56
IFT43-204ENST00000553338 CRYGAP11844 174 aa11.55□□□□□ -0.56
IFT43-204ENST00000553338 VPREB1P12018 145 aa11.55□□□□□ -0.56
IFT43-204ENST00000553338 PRR4Q16378 134 aa11.55□□□□□ -0.56
IFT43-204ENST00000553338 SFTA2Q6UW10 78 aa11.55□□□□□ -0.56
IFT43-204ENST00000553338 LPAP08519 4548 aa11.54□□□□□ -0.56
IFT43-204ENST00000553338 RPL24P83731 157 aaKnown RBP11.54□□□□□ -0.56
IFT43-204ENST00000553338 KRTAP13-1Q8IUC0 172 aa11.54□□□□□ -0.56
IFT43-204ENST00000553338 TYMSOSQ8TAI1 123 aa11.53□□□□□ -0.56
IFT43-204ENST00000553338 CHCHD1Q96BP2 118 aaKnown RBP11.53□□□□□ -0.56
IFT43-204ENST00000553338 YPEL4Q96NS1 127 aa11.53□□□□□ -0.56
IFT43-204ENST00000553338 TSPAN13O95857 204 aa11.52□□□□□ -0.57
IFT43-204ENST00000553338 IFI27L1Q96BM0 104 aa11.52□□□□□ -0.57
IFT43-204ENST00000553338 ANAPC11Q9NYG5 84 aa11.52□□□□□ -0.57
IFT43-204ENST00000553338 TRAV12-1A0A0B4J245 112 aa11.5□□□□□ -0.57
IFT43-204ENST00000553338 TMEM238C9JI98 176 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms