RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 CKS1BP61024 79 aa7.98□□□□□ -1.13
ACTN1-207ENST00000553290 CDKN2A-AS1Q9UH64 79 aa7.98□□□□□ -1.13
ACTN1-207ENST00000553290 FAM168BA1KXE4 195 aa7.97□□□□□ -1.13
ACTN1-207ENST00000553290 FABP9Q0Z7S8 132 aa7.97□□□□□ -1.13
ACTN1-207ENST00000553290 C1orf137Q5JT78 98 aa7.97□□□□□ -1.13
ACTN1-207ENST00000553290 MRPL18Q9H0U6 180 aaKnown RBP7.97□□□□□ -1.13
ACTN1-207ENST00000553290 HMCN2Q8NDA2 5059 aa7.97□□□□□ -1.13
ACTN1-207ENST00000553290 FA2HQ7L5A8 372 aa7.96□□□□□ -1.14
ACTN1-207ENST00000553290 FAM19A5Q7Z5A7 132 aaPredicted RBP7.96□□□□□ -1.14
ACTN1-207ENST00000553290 SMCO4Q9NRQ5 59 aa7.96□□□□□ -1.14
ACTN1-207ENST00000553290 TINCRA0A1B0GVN0 87 aa7.95□□□□□ -1.14
ACTN1-207ENST00000553290 LINC00469Q8N7U9 141 aa7.95□□□□□ -1.14
ACTN1-207ENST00000553290 F8VRH5 84 aa7.94□□□□□ -1.14
ACTN1-207ENST00000553290 M0QXV9 152 aa7.94□□□□□ -1.14
ACTN1-207ENST00000553290 CXCL5P42830 114 aa7.94□□□□□ -1.14
ACTN1-207ENST00000553290 C9orf129Q5T035 196 aaKnown RBP7.94□□□□□ -1.14
ACTN1-207ENST00000553290 CST9LQ9H4G1 147 aa7.94□□□□□ -1.14
ACTN1-207ENST00000553290 TNXBP22105 4242 aa7.94□□□□□ -1.14
ACTN1-207ENST00000553290 IGLV7-43P04211 117 aa7.93□□□□□ -1.14
ACTN1-207ENST00000553290 KRTAP10-8P60410 259 aa7.93□□□□□ -1.14
ACTN1-207ENST00000553290 PMVKQ15126 192 aa7.93□□□□□ -1.14
ACTN1-207ENST00000553290 PDZD11Q5EBL8 140 aa7.93□□□□□ -1.14
ACTN1-207ENST00000553290 KRTAP7-1Q8IUC3 87 aa7.93□□□□□ -1.14
ACTN1-207ENST00000553290 IGLV5-45A0A087WSX0 123 aa7.92□□□□□ -1.14
ACTN1-207ENST00000553290 SMIM1B2RUZ4 78 aa7.92□□□□□ -1.14
ACTN1-207ENST00000553290 UBE2BP63146 152 aa7.92□□□□□ -1.14
ACTN1-207ENST00000553290 DIRC1Q969H9 104 aa7.92□□□□□ -1.14
ACTN1-207ENST00000553290 TRAPPC1Q9Y5R8 145 aa7.92□□□□□ -1.14
ACTN1-207ENST00000553290 SNAPINO95295 136 aa7.91□□□□□ -1.14
ACTN1-207ENST00000553290 APOC3P02656 99 aa7.91□□□□□ -1.14
ACTN1-207ENST00000553290 NDUFA5Q16718 116 aa7.91□□□□□ -1.14
ACTN1-207ENST00000553290 KRTAP11-1Q8IUC1 163 aa7.91□□□□□ -1.14
ACTN1-207ENST00000553290 LINC00614P0C842 121 aa7.9□□□□□ -1.14
ACTN1-207ENST00000553290 ODF1Q14990 250 aa7.9□□□□□ -1.14
ACTN1-207ENST00000553290 SVBPQ8N300 66 aa7.9□□□□□ -1.14
ACTN1-207ENST00000553290 COX7B2Q8TF08 81 aa7.9□□□□□ -1.14
ACTN1-207ENST00000553290 H3BRM9 83 aa7.89□□□□□ -1.15
ACTN1-207ENST00000553290 C18orf32Q8TCD1 76 aa7.89□□□□□ -1.15
ACTN1-207ENST00000553290 XAGE1AQ9HD64 81 aa7.89□□□□□ -1.15
ACTN1-207ENST00000553290 H0Y9J4 135 aa7.88□□□□□ -1.15
ACTN1-207ENST00000553290 SPINK8P0C7L1 97 aa7.88□□□□□ -1.15
ACTN1-207ENST00000553290 LBHQ53QV2 105 aaPredicted RBP7.88□□□□□ -1.15
ACTN1-207ENST00000553290 C22orf24Q9Y442 160 aa7.88□□□□□ -1.15
ACTN1-207ENST00000553290 A0A096LNJ9 63 aa7.87□□□□□ -1.15
ACTN1-207ENST00000553290 HBDP02042 147 aa7.87□□□□□ -1.15
ACTN1-207ENST00000553290 IGLC3P0DOY3 106 aa7.87□□□□□ -1.15
ACTN1-207ENST00000553290 NDUFA6P56556 154 aa7.87□□□□□ -1.15
ACTN1-207ENST00000553290 RAB5BP61020 215 aa7.87□□□□□ -1.15
ACTN1-207ENST00000553290 URB1-AS1Q96HZ7 61 aa7.87□□□□□ -1.15
ACTN1-207ENST00000553290 TP73-AS1Q9UF72 201 aa7.87□□□□□ -1.15
ACTN1-207ENST00000553290 NUPR1O60356 82 aa7.85□□□□□ -1.15
ACTN1-207ENST00000553290 ATP5LO75964 103 aa7.84□□□□□ -1.15
ACTN1-207ENST00000553290 PMCHL1Q16048 86 aa7.84□□□□□ -1.15
ACTN1-207ENST00000553290 MRPL55Q7Z7F7 128 aaKnown RBP7.84□□□□□ -1.15
ACTN1-207ENST00000553290 IGLV5-39A0A0G2JS06 123 aa7.83□□□□□ -1.16
ACTN1-207ENST00000553290 ZNF22P17026 224 aaPredicted RBP7.83□□□□□ -1.16
ACTN1-207ENST00000553290 IGLV1-50A0A075B6I6 118 aa7.82□□□□□ -1.16
ACTN1-207ENST00000553290 ZNF861PO60384 105 aa7.82□□□□□ -1.16
ACTN1-207ENST00000553290 BAGE3Q86Y29 109 aa7.82□□□□□ -1.16
ACTN1-207ENST00000553290 PRR26Q8N8Z3 221 aa7.82□□□□□ -1.16
ACTN1-207ENST00000553290 YPEL4Q96NS1 127 aa7.81□□□□□ -1.16
ACTN1-207ENST00000553290 UBR4Q5T4S7 5183 aa7.8□□□□□ -1.16
ACTN1-207ENST00000553290 IGLV5-37A0A075B6J1 123 aa7.8□□□□□ -1.16
ACTN1-207ENST00000553290 KRTAP1-4P0C5Y4 121 aa7.8□□□□□ -1.16
ACTN1-207ENST00000553290 CHCHD1Q96BP2 118 aaKnown RBP7.8□□□□□ -1.16
ACTN1-207ENST00000553290 LINC00167Q96N53 147 aa7.8□□□□□ -1.16
ACTN1-207ENST00000553290 C11orf86A6NJI1 115 aa7.79□□□□□ -1.16
ACTN1-207ENST00000553290 PFN2P35080 140 aa7.79□□□□□ -1.16
ACTN1-207ENST00000553290 TMEM170BQ5T4T1 132 aa7.79□□□□□ -1.16
ACTN1-207ENST00000553290 SFTA2Q6UW10 78 aa7.79□□□□□ -1.16
ACTN1-207ENST00000553290 NKAPP1Q8N9T2 125 aa7.79□□□□□ -1.16
ACTN1-207ENST00000553290 BCE1O60756 84 aa7.78□□□□□ -1.16
ACTN1-207ENST00000553290 RPL13AP40429 203 aaKnown RBP7.78□□□□□ -1.16
ACTN1-207ENST00000553290 RPL28P46779 137 aaKnown RBP7.78□□□□□ -1.16
ACTN1-207ENST00000553290 COX17Q14061 63 aa7.78□□□□□ -1.16
ACTN1-207ENST00000553290 CHTOPQ9Y3Y2 248 aaKnown RBP7.78□□□□□ -1.16
ACTN1-207ENST00000553290 RPL37AP8A6NKH3 93 aa7.77□□□□□ -1.17
ACTN1-207ENST00000553290 ERG28Q9UKR5 140 aa7.77□□□□□ -1.17
ACTN1-207ENST00000553290 TRAV12-1A0A0B4J245 112 aa7.76□□□□□ -1.17
ACTN1-207ENST00000553290 GAGE10A6NGK3 116 aa7.76□□□□□ -1.17
ACTN1-207ENST00000553290 IFI27L1Q96BM0 104 aa7.76□□□□□ -1.17
ACTN1-207ENST00000553290 LRP2P98164 4655 aa7.75□□□□□ -1.17
ACTN1-207ENST00000553290 CBLN2Q8IUK8 224 aa7.75□□□□□ -1.17
ACTN1-207ENST00000553290 ZNF625Q96I27 306 aaPredicted RBP7.75□□□□□ -1.17
ACTN1-207ENST00000553290 SND1-IT1Q9HBX3 110 aa7.75□□□□□ -1.17
ACTN1-207ENST00000553290 HSBP1O75506 76 aa7.74□□□□□ -1.17
ACTN1-207ENST00000553290 RPL24P83731 157 aaKnown RBP7.74□□□□□ -1.17
ACTN1-207ENST00000553290 TMEM223A0PJW6 202 aa7.73□□□□□ -1.17
ACTN1-207ENST00000553290 VPREB1P12018 145 aa7.73□□□□□ -1.17
ACTN1-207ENST00000553290 TRGC2P03986 189 aa7.72□□□□□ -1.17
ACTN1-207ENST00000553290 UBE2AP49459 152 aa7.72□□□□□ -1.17
ACTN1-207ENST00000553290 IGKV2-28A0A075B6P5 120 aa7.71□□□□□ -1.18
ACTN1-207ENST00000553290 SCO1O75880 301 aa7.71□□□□□ -1.18
ACTN1-207ENST00000553290 IGKV2D-28P01615 120 aa7.71□□□□□ -1.18
ACTN1-207ENST00000553290 LINC00158P58513 81 aa7.71□□□□□ -1.18
ACTN1-207ENST00000553290 FAM19A2Q8N3H0 131 aa7.71□□□□□ -1.18
ACTN1-207ENST00000553290 KRTAP13-1Q8IUC0 172 aa7.7□□□□□ -1.18
ACTN1-207ENST00000553290 LEPROTL1O95214 131 aa7.68□□□□□ -1.18
ACTN1-207ENST00000553290 CRYGAP11844 174 aa7.68□□□□□ -1.18
ACTN1-207ENST00000553290 SLC7A5P1Q8MH63 180 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms