RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 ALKBH7Q9BT30 221 aaPredicted RBP12.29□□□□□ -0.44
CACNB3-218ENST00000550771 SEC11AP67812 179 aa12.28□□□□□ -0.44
CACNB3-218ENST00000550771 XAGE1AQ9HD64 81 aa12.28□□□□□ -0.44
CACNB3-218ENST00000550771 HERVK_113P63121 156 aa12.27□□□□□ -0.45
CACNB3-218ENST00000550771 TP73-AS1Q9UF72 201 aa12.27□□□□□ -0.45
CACNB3-218ENST00000550771 PNRC1Q12796 327 aaPredicted RBP12.26□□□□□ -0.45
CACNB3-218ENST00000550771 PAPPA-AS1Q5QFB9 102 aa12.26□□□□□ -0.45
CACNB3-218ENST00000550771 ANAPC16Q96DE5 110 aa12.26□□□□□ -0.45
CACNB3-218ENST00000550771 CTDSP1Q9GZU7 261 aa12.26□□□□□ -0.45
CACNB3-218ENST00000550771 F8VRH5 84 aa12.25□□□□□ -0.45
CACNB3-218ENST00000550771 NXT2Q9NPJ8 142 aaKnown RBP12.25□□□□□ -0.45
CACNB3-218ENST00000550771 CDKN2A-AS1Q9UH64 79 aa12.25□□□□□ -0.45
CACNB3-218ENST00000550771 MT-ND4LP03901 98 aa12.24□□□□□ -0.45
CACNB3-218ENST00000550771 G0S2P27469 103 aa12.24□□□□□ -0.45
CACNB3-218ENST00000550771 CXCL5P42830 114 aa12.24□□□□□ -0.45
CACNB3-218ENST00000550771 MRPL55Q7Z7F7 128 aaKnown RBP12.24□□□□□ -0.45
CACNB3-218ENST00000550771 GEMIN7Q9H840 131 aaKnown RBP12.24□□□□□ -0.45
CACNB3-218ENST00000550771 RPL28P46779 137 aaKnown RBP12.23□□□□□ -0.45
CACNB3-218ENST00000550771 UQCC3Q6UW78 93 aa12.23□□□□□ -0.45
CACNB3-218ENST00000550771 TIMM17AQ99595 171 aa12.23□□□□□ -0.45
CACNB3-218ENST00000550771 BCE1O60756 84 aa12.22□□□□□ -0.45
CACNB3-218ENST00000550771 TOMM6Q96B49 74 aa12.2□□□□□ -0.46
CACNB3-218ENST00000550771 MUC2Q02817 5179 aa12.2□□□□□ -0.46
CACNB3-218ENST00000550771 A0A087X002 238 aa12.19□□□□□ -0.46
CACNB3-218ENST00000550771 TSPAN13O95857 204 aa12.19□□□□□ -0.46
CACNB3-218ENST00000550771 COMMD7Q86VX2 200 aa12.19□□□□□ -0.46
CACNB3-218ENST00000550771 A0A0U1RQV1 116 aa12.18□□□□□ -0.46
CACNB3-218ENST00000550771 CRYGAP11844 174 aa12.18□□□□□ -0.46
CACNB3-218ENST00000550771 SMIM1B2RUZ4 78 aa12.17□□□□□ -0.46
CACNB3-218ENST00000550771 LINC00167Q96N53 147 aa12.17□□□□□ -0.46
CACNB3-218ENST00000550771 PDZD11Q5EBL8 140 aa12.16□□□□□ -0.46
CACNB3-218ENST00000550771 ERASQ7Z444 233 aa12.16□□□□□ -0.46
CACNB3-218ENST00000550771 TYMSOSQ8TAI1 123 aa12.16□□□□□ -0.46
CACNB3-218ENST00000550771 TMEM218A2RU14 115 aa12.15□□□□□ -0.46
CACNB3-218ENST00000550771 IGLV5-45A0A087WSX0 123 aa12.14□□□□□ -0.47
CACNB3-218ENST00000550771 TINCRA0A1B0GVN0 87 aa12.14□□□□□ -0.47
CACNB3-218ENST00000550771 RPL37AP8A6NKH3 93 aa12.14□□□□□ -0.47
CACNB3-218ENST00000550771 COX7B2Q8TF08 81 aa12.14□□□□□ -0.47
CACNB3-218ENST00000550771 SCGB3A1Q96QR1 104 aa12.14□□□□□ -0.47
CACNB3-218ENST00000550771 IGLV5-37A0A075B6J1 123 aa12.13□□□□□ -0.47
CACNB3-218ENST00000550771 LINC01549A6NIU2 74 aa12.11□□□□□ -0.47
CACNB3-218ENST00000550771 KRTAP13-1Q8IUC0 172 aa12.11□□□□□ -0.47
CACNB3-218ENST00000550771 GAGE10A6NGK3 116 aa12.1□□□□□ -0.47
CACNB3-218ENST00000550771 ADCYAP1P18509 176 aa12.1□□□□□ -0.47
CACNB3-218ENST00000550771 KIAA1644Q3SXP7 199 aa12.1□□□□□ -0.47
CACNB3-218ENST00000550771 SEC11CQ9BY50 192 aa12.1□□□□□ -0.47
CACNB3-218ENST00000550771 UBE2AP49459 152 aa12.08□□□□□ -0.48
CACNB3-218ENST00000550771 NKAPP1Q8N9T2 125 aa12.08□□□□□ -0.48
CACNB3-218ENST00000550771 CST9LQ9H4G1 147 aa12.08□□□□□ -0.48
CACNB3-218ENST00000550771 ANAPC11Q9NYG5 84 aa12.08□□□□□ -0.48
CACNB3-218ENST00000550771 LINC01546A6NGU7 62 aa12.07□□□□□ -0.48
CACNB3-218ENST00000550771 RAB5BP61020 215 aa12.07□□□□□ -0.48
CACNB3-218ENST00000550771 FAM229BQ4G0N7 80 aa12.07□□□□□ -0.48
CACNB3-218ENST00000550771 TRAV9-1A0A075B6T8 112 aa12.06□□□□□ -0.48
CACNB3-218ENST00000550771 SPINK8P0C7L1 97 aa12.06□□□□□ -0.48
CACNB3-218ENST00000550771 KRTAP13-2Q52LG2 175 aa12.06□□□□□ -0.48
CACNB3-218ENST00000550771 MRPL18Q9H0U6 180 aaKnown RBP12.06□□□□□ -0.48
CACNB3-218ENST00000550771 PMVKQ15126 192 aa12.05□□□□□ -0.48
CACNB3-218ENST00000550771 ATP5LO75964 103 aa12.04□□□□□ -0.48
CACNB3-218ENST00000550771 H3BRM9 83 aa12.03□□□□□ -0.48
CACNB3-218ENST00000550771 NDUFA5Q16718 116 aa12.03□□□□□ -0.48
CACNB3-218ENST00000550771 LINC00304Q8N9R0 145 aa12.03□□□□□ -0.48
CACNB3-218ENST00000550771 GNB1LQ9BYB4 327 aa12.02□□□□□ -0.49
CACNB3-218ENST00000550771 IGKV2-28A0A075B6P5 120 aa12.01□□□□□ -0.49
CACNB3-218ENST00000550771 IGKV2D-28P01615 120 aa12.01□□□□□ -0.49
CACNB3-218ENST00000550771 CTAG1AP78358 180 aa12.01□□□□□ -0.49
CACNB3-218ENST00000550771 C10orf91Q5T1B1 145 aa12.01□□□□□ -0.49
CACNB3-218ENST00000550771 IGKV2D-26A0A0A0MRZ7 120 aa11.99□□□□□ -0.49
CACNB3-218ENST00000550771 SCO1O75880 301 aa11.99□□□□□ -0.49
CACNB3-218ENST00000550771 RETNLBQ9BQ08 111 aa11.99□□□□□ -0.49
CACNB3-218ENST00000550771 IGLV5-39A0A0G2JS06 123 aa11.98□□□□□ -0.49
CACNB3-218ENST00000550771 PFN2P35080 140 aa11.98□□□□□ -0.49
CACNB3-218ENST00000550771 APOC3P02656 99 aa11.97□□□□□ -0.49
CACNB3-218ENST00000550771 IGLC3P0DOY3 106 aa11.97□□□□□ -0.49
CACNB3-218ENST00000550771 VPREB1P12018 145 aa11.97□□□□□ -0.49
CACNB3-218ENST00000550771 PRLHP81277 87 aa11.97□□□□□ -0.49
CACNB3-218ENST00000550771 RHEBQ15382 184 aa11.97□□□□□ -0.49
CACNB3-218ENST00000550771 TPRXLQ17RH7 258 aa11.97□□□□□ -0.49
CACNB3-218ENST00000550771 LCE2AQ5TA79 106 aaPredicted RBP11.97□□□□□ -0.49
CACNB3-218ENST00000550771 FA2HQ7L5A8 372 aa11.97□□□□□ -0.49
CACNB3-218ENST00000550771 KRTAP9-2Q9BYQ4 174 aa11.97□□□□□ -0.49
CACNB3-218ENST00000550771 SMCO4Q9NRQ5 59 aa11.97□□□□□ -0.49
CACNB3-218ENST00000550771 S100PP25815 95 aa11.96□□□□□ -0.49
CACNB3-218ENST00000550771 SVBPQ8N300 66 aa11.96□□□□□ -0.49
CACNB3-218ENST00000550771 TMEM126AQ9H061 195 aa11.96□□□□□ -0.49
CACNB3-218ENST00000550771 SND1-IT1Q9HBX3 110 aa11.96□□□□□ -0.49
CACNB3-218ENST00000550771 RPS10P5Q9NQ39 176 aa11.96□□□□□ -0.49
CACNB3-218ENST00000550771 SNAPINO95295 136 aa11.95□□□□□ -0.5
CACNB3-218ENST00000550771 RPL24P83731 157 aaKnown RBP11.95□□□□□ -0.5
CACNB3-218ENST00000550771 COX17Q14061 63 aa11.95□□□□□ -0.5
CACNB3-218ENST00000550771 COX19Q49B96 90 aa11.95□□□□□ -0.5
CACNB3-218ENST00000550771 FAM19A1Q7Z5A9 133 aa11.95□□□□□ -0.5
CACNB3-218ENST00000550771 ERG28Q9UKR5 140 aa11.95□□□□□ -0.5
CACNB3-218ENST00000550771 SLC7A5P1Q8MH63 180 aa11.94□□□□□ -0.5
CACNB3-218ENST00000550771 CDIP1Q9H305 208 aa11.94□□□□□ -0.5
CACNB3-218ENST00000550771 IGLV7-46A0A075B6I9 117 aa11.93□□□□□ -0.5
CACNB3-218ENST00000550771 TMEM238C9JI98 176 aa11.93□□□□□ -0.5
CACNB3-218ENST00000550771 M0R378 163 aa11.92□□□□□ -0.5
CACNB3-218ENST00000550771 ZNF22P17026 224 aaPredicted RBP11.92□□□□□ -0.5
CACNB3-218ENST00000550771 MUC17Q685J3 4493 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms