RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 PTTG1IPP53801 180 aa4.99□□□□□ -1.61
SMARCD1-207ENST00000549526 RPL18AQ02543 176 aaKnown RBP4.99□□□□□ -1.61
SMARCD1-207ENST00000549526 SCGB3A1Q96QR1 104 aa4.99□□□□□ -1.61
SMARCD1-207ENST00000549526 TIMM17AQ99595 171 aa4.99□□□□□ -1.61
SMARCD1-207ENST00000549526 TRAPPC1Q9Y5R8 145 aa4.99□□□□□ -1.61
SMARCD1-207ENST00000549526 F8WDY8 70 aa4.98□□□□□ -1.61
SMARCD1-207ENST00000549526 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.98□□□□□ -1.61
SMARCD1-207ENST00000549526 CRYGAP11844 174 aa4.98□□□□□ -1.61
SMARCD1-207ENST00000549526 ERASQ7Z444 233 aa4.98□□□□□ -1.61
SMARCD1-207ENST00000549526 GEMIN7Q9H840 131 aaKnown RBP4.98□□□□□ -1.61
SMARCD1-207ENST00000549526 MRPL35Q9NZE8 188 aaKnown RBP4.98□□□□□ -1.61
SMARCD1-207ENST00000549526 IGLV1-50A0A075B6I6 118 aa4.97□□□□□ -1.61
SMARCD1-207ENST00000549526 LINC01546A6NGU7 62 aa4.97□□□□□ -1.61
SMARCD1-207ENST00000549526 LINC01549A6NIU2 74 aa4.97□□□□□ -1.61
SMARCD1-207ENST00000549526 PRSS2P07478 247 aa4.97□□□□□ -1.61
SMARCD1-207ENST00000549526 SEC11AP67812 179 aa4.97□□□□□ -1.61
SMARCD1-207ENST00000549526 RNF151Q2KHN1 245 aa4.97□□□□□ -1.61
SMARCD1-207ENST00000549526 C10orf25Q5T742 122 aa4.97□□□□□ -1.61
SMARCD1-207ENST00000549526 UNQ6190/PRO20217Q6UXQ8 127 aa4.97□□□□□ -1.61
SMARCD1-207ENST00000549526 PACRGQ96M98 296 aaPredicted RBP4.97□□□□□ -1.61
SMARCD1-207ENST00000549526 TOMM7Q9P0U1 55 aa4.97□□□□□ -1.61
SMARCD1-207ENST00000549526 HERVK_113P63121 156 aa4.96□□□□□ -1.62
SMARCD1-207ENST00000549526 KIAA0087Q14695 138 aa4.96□□□□□ -1.62
SMARCD1-207ENST00000549526 C2orf82Q6UX34 121 aa4.96□□□□□ -1.62
SMARCD1-207ENST00000549526 LINC01561Q8N1V8 128 aa4.96□□□□□ -1.62
SMARCD1-207ENST00000549526 C6orf48Q9UBA6 75 aa4.96□□□□□ -1.62
SMARCD1-207ENST00000549526 SYNE2Q8WXH0 6885 aaKnown RBP4.96□□□□□ -1.62
SMARCD1-207ENST00000549526 A0A1W2PNN7 141 aa4.95□□□□□ -1.62
SMARCD1-207ENST00000549526 LINC00614P0C842 121 aa4.95□□□□□ -1.62
SMARCD1-207ENST00000549526 CKS1BP61024 79 aa4.95□□□□□ -1.62
SMARCD1-207ENST00000549526 GAGE2EQ4V326 116 aa4.95□□□□□ -1.62
SMARCD1-207ENST00000549526 C9orf116Q5BN46 136 aaPredicted RBP4.95□□□□□ -1.62
SMARCD1-207ENST00000549526 FAM19A3Q7Z5A8 133 aa4.95□□□□□ -1.62
SMARCD1-207ENST00000549526 LINC00469Q8N7U9 141 aa4.95□□□□□ -1.62
SMARCD1-207ENST00000549526 C18orf32Q8TCD1 76 aa4.95□□□□□ -1.62
SMARCD1-207ENST00000549526 DIRC1Q969H9 104 aa4.95□□□□□ -1.62
SMARCD1-207ENST00000549526 GAGE2DQ9UEU5 116 aa4.95□□□□□ -1.62
SMARCD1-207ENST00000549526 CDKN2A-AS1Q9UH64 79 aa4.95□□□□□ -1.62
SMARCD1-207ENST00000549526 TRBV30A0A0K0K1B3 111 aa4.94□□□□□ -1.62
SMARCD1-207ENST00000549526 HBDP02042 147 aa4.94□□□□□ -1.62
SMARCD1-207ENST00000549526 NDUFA6P56556 154 aa4.94□□□□□ -1.62
SMARCD1-207ENST00000549526 RAB5BP61020 215 aa4.94□□□□□ -1.62
SMARCD1-207ENST00000549526 PMVKQ15126 192 aa4.94□□□□□ -1.62
SMARCD1-207ENST00000549526 PMCHL1Q16048 86 aa4.94□□□□□ -1.62
SMARCD1-207ENST00000549526 C6orf226Q5I0X4 101 aa4.94□□□□□ -1.62
SMARCD1-207ENST00000549526 CST9LQ9H4G1 147 aa4.94□□□□□ -1.62
SMARCD1-207ENST00000549526 TINCRA0A1B0GVN0 87 aa4.93□□□□□ -1.62
SMARCD1-207ENST00000549526 TLX1NBP0CAT3 122 aa4.93□□□□□ -1.62
SMARCD1-207ENST00000549526 CFC1BP0CG36 223 aa4.93□□□□□ -1.62
SMARCD1-207ENST00000549526 CBLN2Q8IUK8 224 aa4.93□□□□□ -1.62
SMARCD1-207ENST00000549526 Q8IZM0 81 aa4.93□□□□□ -1.62
SMARCD1-207ENST00000549526 SLC7A5P1Q8MH63 180 aa4.93□□□□□ -1.62
SMARCD1-207ENST00000549526 URB1-AS1Q96HZ7 61 aa4.93□□□□□ -1.62
SMARCD1-207ENST00000549526 YPEL4Q96NS1 127 aa4.93□□□□□ -1.62
SMARCD1-207ENST00000549526 A0A096LNJ9 63 aa4.92□□□□□ -1.62
SMARCD1-207ENST00000549526 FAM168BA1KXE4 195 aa4.92□□□□□ -1.62
SMARCD1-207ENST00000549526 SMIM1B2RUZ4 78 aa4.92□□□□□ -1.62
SMARCD1-207ENST00000549526 NDUFC2-KCTD14E9PQ53 114 aa4.92□□□□□ -1.62
SMARCD1-207ENST00000549526 SPINK8P0C7L1 97 aa4.92□□□□□ -1.62
SMARCD1-207ENST00000549526 RPL13AP40429 203 aaKnown RBP4.92□□□□□ -1.62
SMARCD1-207ENST00000549526 C1orf137Q5JT78 98 aa4.92□□□□□ -1.62
SMARCD1-207ENST00000549526 PHF5AQ7RTV0 110 aaKnown RBP4.92□□□□□ -1.62
SMARCD1-207ENST00000549526 FAM19A5Q7Z5A7 132 aaPredicted RBP4.92□□□□□ -1.62
SMARCD1-207ENST00000549526 IGLV5-45A0A087WSX0 123 aa4.91□□□□□ -1.62
SMARCD1-207ENST00000549526 F8VRH5 84 aa4.91□□□□□ -1.62
SMARCD1-207ENST00000549526 H3BRM9 83 aa4.91□□□□□ -1.62
SMARCD1-207ENST00000549526 ATP5LO75964 103 aa4.91□□□□□ -1.62
SMARCD1-207ENST00000549526 CXCL5P42830 114 aa4.91□□□□□ -1.62
SMARCD1-207ENST00000549526 PDZD11Q5EBL8 140 aa4.91□□□□□ -1.62
SMARCD1-207ENST00000549526 COX7B2Q8TF08 81 aa4.91□□□□□ -1.62
SMARCD1-207ENST00000549526 MUC17Q685J3 4493 aa4.91□□□□□ -1.62
SMARCD1-207ENST00000549526 H0Y9J4 135 aa4.9□□□□□ -1.63
SMARCD1-207ENST00000549526 TPRXLQ17RH7 258 aa4.9□□□□□ -1.63
SMARCD1-207ENST00000549526 BAGE3Q86Y29 109 aa4.9□□□□□ -1.63
SMARCD1-207ENST00000549526 M0QXV9 152 aa4.89□□□□□ -1.63
SMARCD1-207ENST00000549526 IGLC3P0DOY3 106 aa4.89□□□□□ -1.63
SMARCD1-207ENST00000549526 UBE2BP63146 152 aa4.89□□□□□ -1.63
SMARCD1-207ENST00000549526 C9orf129Q5T035 196 aaKnown RBP4.89□□□□□ -1.63
SMARCD1-207ENST00000549526 CHCHD1Q96BP2 118 aaKnown RBP4.89□□□□□ -1.63
SMARCD1-207ENST00000549526 RETNLBQ9BQ08 111 aa4.89□□□□□ -1.63
SMARCD1-207ENST00000549526 XAGE1AQ9HD64 81 aa4.89□□□□□ -1.63
SMARCD1-207ENST00000549526 HSBP1O75506 76 aa4.88□□□□□ -1.63
SMARCD1-207ENST00000549526 TRGC2P03986 189 aa4.88□□□□□ -1.63
SMARCD1-207ENST00000549526 ZNF22P17026 224 aaPredicted RBP4.88□□□□□ -1.63
SMARCD1-207ENST00000549526 LORP23490 312 aaPredicted RBP4.88□□□□□ -1.63
SMARCD1-207ENST00000549526 KRTAP7-1Q8IUC3 87 aa4.88□□□□□ -1.63
SMARCD1-207ENST00000549526 KRTAP4-1Q9BYQ7 146 aa4.88□□□□□ -1.63
SMARCD1-207ENST00000549526 C11orf86A6NJI1 115 aa4.87□□□□□ -1.63
SMARCD1-207ENST00000549526 IGLV7-43P04211 117 aa4.87□□□□□ -1.63
SMARCD1-207ENST00000549526 KRTAP1-4P0C5Y4 121 aa4.87□□□□□ -1.63
SMARCD1-207ENST00000549526 TMEM170BQ5T4T1 132 aa4.87□□□□□ -1.63
SMARCD1-207ENST00000549526 LCE2CQ5TA81 110 aa4.87□□□□□ -1.63
SMARCD1-207ENST00000549526 IFI27L1Q96BM0 104 aa4.87□□□□□ -1.63
SMARCD1-207ENST00000549526 CHTOPQ9Y3Y2 248 aaKnown RBP4.87□□□□□ -1.63
SMARCD1-207ENST00000549526 MACF1Q9UPN3 7388 aaKnown RBP4.86□□□□□ -1.63
SMARCD1-207ENST00000549526 IGLV7-46A0A075B6I9 117 aa4.86□□□□□ -1.63
SMARCD1-207ENST00000549526 KRTAP10-6P60371 365 aaPredicted RBP4.86□□□□□ -1.63
SMARCD1-207ENST00000549526 MT1HP80294 61 aa4.86□□□□□ -1.63
SMARCD1-207ENST00000549526 KRTAP11-1Q8IUC1 163 aa4.86□□□□□ -1.63
SMARCD1-207ENST00000549526 FAM19A2Q8N3H0 131 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms