RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 FAT1Q14517 4588 aa-0.2□□□□□ -2.44
RPAP3-206ENST00000548296 TNXBP22105 4242 aa-0.21□□□□□ -2.44
RPAP3-206ENST00000548296 NCOA3Q9Y6Q9 1424 aa-0.21□□□□□ -2.44
RPAP3-206ENST00000548296 FAT2Q9NYQ8 4349 aa-0.21□□□□□ -2.44
RPAP3-206ENST00000548296 BIRC6Q9NR09 4857 aa-0.21□□□□□ -2.44
RPAP3-206ENST00000548296 MAGI1Q96QZ7 1491 aaPredicted RBP-0.21□□□□□ -2.44
RPAP3-206ENST00000548296 FXYD6-FXYD2A0A087WZ82 144 aa-0.21□□□□□ -2.44
RPAP3-206ENST00000548296 PRO1854Q9UHT4 67 aa-0.21□□□□□ -2.44
RPAP3-206ENST00000548296 STARD9Q9P2P6 4700 aa-0.21□□□□□ -2.44
RPAP3-206ENST00000548296 AKAP13Q12802 2813 aa-0.21□□□□□ -2.44
RPAP3-206ENST00000548296 DNHD1Q96M86 4753 aa-0.21□□□□□ -2.44
RPAP3-206ENST00000548296 NBEAL1Q6ZS30 2694 aa-0.21□□□□□ -2.44
RPAP3-206ENST00000548296 POLA1P09884 1462 aaPredicted RBP-0.22□□□□□ -2.44
RPAP3-206ENST00000548296 CCDC168Q8NDH2 2452 aa-0.22□□□□□ -2.44
RPAP3-206ENST00000548296 HSPG2P98160 4391 aa-0.22□□□□□ -2.44
RPAP3-206ENST00000548296 TGP01266 2768 aa-0.22□□□□□ -2.44
RPAP3-206ENST00000548296 DSPP15924 2871 aaKnown RBP-0.22□□□□□ -2.44
RPAP3-206ENST00000548296 TSC2P49815 1807 aa-0.22□□□□□ -2.45
RPAP3-206ENST00000548296 PIEZO2Q9H5I5 2752 aa-0.23□□□□□ -2.45
RPAP3-206ENST00000548296 ALMS1Q8TCU4 4167 aa-0.23□□□□□ -2.45
RPAP3-206ENST00000548296 COX6B1P14854 86 aa-0.23□□□□□ -2.45
RPAP3-206ENST00000548296 SPRR2DP22532 72 aa-0.23□□□□□ -2.45
RPAP3-206ENST00000548296 UBA52P62987 128 aaKnown RBP-0.23□□□□□ -2.45
RPAP3-206ENST00000548296 WNK1Q9H4A3 2382 aa-0.23□□□□□ -2.45
RPAP3-206ENST00000548296 ITPR1Q14643 2758 aa-0.23□□□□□ -2.45
RPAP3-206ENST00000548296 CSPG4Q6UVK1 2322 aa-0.24□□□□□ -2.45
RPAP3-206ENST00000548296 SCN7AQ01118 1682 aa-0.24□□□□□ -2.45
RPAP3-206ENST00000548296 LRRK2Q5S007 2527 aa-0.24□□□□□ -2.45
RPAP3-206ENST00000548296 ADGRL2O95490 1459 aa-0.24□□□□□ -2.45
RPAP3-206ENST00000548296 GAPVD1Q14C86 1478 aa-0.24□□□□□ -2.45
RPAP3-206ENST00000548296 CHD1O14646 1710 aa-0.24□□□□□ -2.45
RPAP3-206ENST00000548296 TRBV7-4A0A0J9YYF1 115 aa-0.25□□□□□ -2.45
RPAP3-206ENST00000548296 TMEM262E9PQX1 116 aa-0.25□□□□□ -2.45
RPAP3-206ENST00000548296 TRAPPC2P0DI81 140 aa-0.25□□□□□ -2.45
RPAP3-206ENST00000548296 TRAPPC2BP0DI82 140 aa-0.25□□□□□ -2.45
RPAP3-206ENST00000548296 GTF2H5Q6ZYL4 71 aa-0.25□□□□□ -2.45
RPAP3-206ENST00000548296 TOP2BQ02880 1626 aa-0.25□□□□□ -2.45
RPAP3-206ENST00000548296 CC2D2AQ9P2K1 1620 aa-0.25□□□□□ -2.45
RPAP3-206ENST00000548296 NUP188Q5SRE5 1749 aa-0.25□□□□□ -2.45
RPAP3-206ENST00000548296 APC2O95996 2303 aa-0.25□□□□□ -2.45
RPAP3-206ENST00000548296 LAMA3Q16787 3333 aa-0.25□□□□□ -2.45
RPAP3-206ENST00000548296 DCHS2Q6V1P9 2916 aa-0.26□□□□□ -2.45
RPAP3-206ENST00000548296 PRM1P04553 51 aa-0.26□□□□□ -2.45
RPAP3-206ENST00000548296 KRTDAPP60985 99 aa-0.26□□□□□ -2.45
RPAP3-206ENST00000548296 HSD52Q0P140 79 aa-0.26□□□□□ -2.45
RPAP3-206ENST00000548296 KRTAP20-2Q3LI61 65 aa-0.26□□□□□ -2.45
RPAP3-206ENST00000548296 C12orf57Q99622 126 aa-0.26□□□□□ -2.45
RPAP3-206ENST00000548296 PRO1933Q9H354 126 aa-0.26□□□□□ -2.45
RPAP3-206ENST00000548296 HECTD4Q9Y4D8 3996 aa-0.26□□□□□ -2.45
RPAP3-206ENST00000548296 LRP1BQ9NZR2 4599 aa-0.26□□□□□ -2.45
RPAP3-206ENST00000548296 TOPAZ1Q8N9V7 1692 aa-0.27□□□□□ -2.45
RPAP3-206ENST00000548296 GVINP1Q7Z2Y8 2422 aa-0.27□□□□□ -2.45
RPAP3-206ENST00000548296 LINC00959A0A1B0GUT2 108 aa-0.27□□□□□ -2.45
RPAP3-206ENST00000548296 A0A1B0GWA3 101 aa-0.27□□□□□ -2.45
RPAP3-206ENST00000548296 C20orf202A1L168 122 aa-0.27□□□□□ -2.45
RPAP3-206ENST00000548296 FAM223BA6NKX1 122 aa-0.27□□□□□ -2.45
RPAP3-206ENST00000548296 SAA2P0DJI9 122 aaPredicted RBP-0.27□□□□□ -2.45
RPAP3-206ENST00000548296 SPRR1BP22528 89 aa-0.27□□□□□ -2.45
RPAP3-206ENST00000548296 SPTA1P02549 2419 aa-0.27□□□□□ -2.45
RPAP3-206ENST00000548296 ABCA3Q99758 1704 aa-0.27□□□□□ -2.45
RPAP3-206ENST00000548296 COL4A6Q14031 1691 aa-0.27□□□□□ -2.45
RPAP3-206ENST00000548296 C1orf167Q5SNV9 1468 aa-0.28□□□□□ -2.45
RPAP3-206ENST00000548296 LAMA2P24043 3122 aaKnown RBP-0.28□□□□□ -2.45
RPAP3-206ENST00000548296 NIPBLQ6KC79 2804 aaeCLIP-0.28□□□□□ -2.45
RPAP3-206ENST00000548296 CRYM-AS1A6NIL9 109 aa-0.28□□□□□ -2.45
RPAP3-206ENST00000548296 SNCAP37840 140 aa-0.28□□□□□ -2.45
RPAP3-206ENST00000548296 SFTA2Q6UW10 78 aa-0.28□□□□□ -2.45
RPAP3-206ENST00000548296 LINC01600Q96MT4 127 aa-0.28□□□□□ -2.45
RPAP3-206ENST00000548296 LINC00846Q9NV44 126 aa-0.28□□□□□ -2.45
RPAP3-206ENST00000548296 TRANK1O15050 2925 aa-0.28□□□□□ -2.45
RPAP3-206ENST00000548296 GCN1Q92616 2671 aaKnown RBP-0.29□□□□□ -2.46
RPAP3-206ENST00000548296 MXRA5Q9NR99 2828 aa-0.29□□□□□ -2.46
RPAP3-206ENST00000548296 ZFYVE16Q7Z3T8 1539 aa-0.29□□□□□ -2.46
RPAP3-206ENST00000548296 NF1P21359 2839 aa-0.29□□□□□ -2.46
RPAP3-206ENST00000548296 LAMA5O15230 3695 aa-0.29□□□□□ -2.46
RPAP3-206ENST00000548296 PDCD11Q14690 1871 aaKnown RBP-0.3□□□□□ -2.46
RPAP3-206ENST00000548296 K7EQZ3 153 aa-0.3□□□□□ -2.46
RPAP3-206ENST00000548296 MAP1AP78559 2803 aaPredicted RBP-0.3□□□□□ -2.46
RPAP3-206ENST00000548296 TLN1Q9Y490 2541 aaKnown RBP-0.3□□□□□ -2.46
RPAP3-206ENST00000548296 A0A0G2JMZ2 1700 aa-0.3□□□□□ -2.46
RPAP3-206ENST00000548296 ITPR3Q14573 2671 aa-0.31□□□□□ -2.46
RPAP3-206ENST00000548296 CGREF1Q99674 301 aa-0.31□□□□□ -2.46
RPAP3-206ENST00000548296 XRN1Q8IZH2 1706 aaKnown RBP-0.31□□□□□ -2.46
RPAP3-206ENST00000548296 CEP295Q9C0D2 2601 aa-0.31□□□□□ -2.46
RPAP3-206ENST00000548296 CFAP46Q8IYW2 2715 aa-0.31□□□□□ -2.46
RPAP3-206ENST00000548296 SETBP1Q9Y6X0 1596 aa-0.32□□□□□ -2.46
RPAP3-206ENST00000548296 hADV29S1A0JD25 119 aa-0.32□□□□□ -2.46
RPAP3-206ENST00000548296 KRTAP19-7Q3SYF9 63 aa-0.32□□□□□ -2.46
RPAP3-206ENST00000548296 FDCSPQ8NFU4 85 aa-0.32□□□□□ -2.46
RPAP3-206ENST00000548296 FLNBO75369 2602 aaKnown RBP-0.32□□□□□ -2.46
RPAP3-206ENST00000548296 TNRC18O15417 2968 aaPredicted RBP-0.32□□□□□ -2.46
RPAP3-206ENST00000548296 URB1O60287 2271 aaKnown RBP-0.33□□□□□ -2.46
RPAP3-206ENST00000548296 KIAA0556O60303 1618 aa-0.33□□□□□ -2.46
RPAP3-206ENST00000548296 S100PP25815 95 aa-0.33□□□□□ -2.46
RPAP3-206ENST00000548296 LCN9Q8WX39 176 aa-0.33□□□□□ -2.46
RPAP3-206ENST00000548296 ABCC5O15440 1437 aa-0.33□□□□□ -2.46
RPAP3-206ENST00000548296 PEG3Q9GZU2 1588 aa-0.33□□□□□ -2.46
RPAP3-206ENST00000548296 CNOT1A5YKK6 2376 aaKnown RBP-0.33□□□□□ -2.46
RPAP3-206ENST00000548296 PCNX1Q96RV3 2341 aa-0.33□□□□□ -2.46
RPAP3-206ENST00000548296 PRKDCP78527 4128 aaKnown RBP-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms