RNA–Protein interactions for RNA: ENST00000547034.5

TMTC3-202, Transcript of transmembrane and tetratricopeptide repeat containing 3, humanhuman

TSL 1 (best)

Gene TMTC3, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC3-202ENST00000547034 Q1RN00 199 aa11.67□□□□□ -0.54
TMTC3-202ENST00000547034 C6orf226Q5I0X4 101 aa11.67□□□□□ -0.54
TMTC3-202ENST00000547034 MIR7-3HGQ8N6C7 128 aa11.67□□□□□ -0.54
TMTC3-202ENST00000547034 TRIAP1O43715 76 aa11.66□□□□□ -0.54
TMTC3-202ENST00000547034 SCGB1C2P0DMR2 95 aa11.66□□□□□ -0.54
TMTC3-202ENST00000547034 NANOS2P60321 138 aaKnown RBP11.66□□□□□ -0.54
TMTC3-202ENST00000547034 ANK2Q01484 3957 aa11.66□□□□□ -0.54
TMTC3-202ENST00000547034 K7ERU9 68 aa11.65□□□□□ -0.54
TMTC3-202ENST00000547034 RPL13AP40429 203 aaKnown RBP11.65□□□□□ -0.54
TMTC3-202ENST00000547034 CXCL5P42830 114 aa11.65□□□□□ -0.54
TMTC3-202ENST00000547034 PKD1L1Q8TDX9 2849 aa11.65□□□□□ -0.54
TMTC3-202ENST00000547034 IGLV10-54A0A075B6I4 117 aa11.65□□□□□ -0.55
TMTC3-202ENST00000547034 ENHOQ6UWT2 76 aa11.65□□□□□ -0.55
TMTC3-202ENST00000547034 DEFB131BA0A096LNP1 70 aa11.64□□□□□ -0.55
TMTC3-202ENST00000547034 SMCPP49901 116 aaPredicted RBP11.64□□□□□ -0.55
TMTC3-202ENST00000547034 KLK12Q9UKR0 248 aa11.64□□□□□ -0.55
TMTC3-202ENST00000547034 LINC00158P58513 81 aa11.63□□□□□ -0.55
TMTC3-202ENST00000547034 KLK5Q9Y337 293 aaPredicted RBP11.63□□□□□ -0.55
TMTC3-202ENST00000547034 COL6A5A8TX70 2615 aa11.62□□□□□ -0.55
TMTC3-202ENST00000547034 TRAV8-4A0A0B4J246 113 aa11.62□□□□□ -0.55
TMTC3-202ENST00000547034 PRB2P02812 416 aaPredicted RBP11.62□□□□□ -0.55
TMTC3-202ENST00000547034 WFDC10BQ8IUB3 73 aa11.62□□□□□ -0.55
TMTC3-202ENST00000547034 MTURNQ8N3F0 131 aa11.62□□□□□ -0.55
TMTC3-202ENST00000547034 GAGE12HA6NDE8 117 aa11.61□□□□□ -0.55
TMTC3-202ENST00000547034 MALP21145 153 aa11.61□□□□□ -0.55
TMTC3-202ENST00000547034 ESRGQ1W209 222 aa11.61□□□□□ -0.55
TMTC3-202ENST00000547034 M0QXV9 152 aa11.6□□□□□ -0.55
TMTC3-202ENST00000547034 CCL18P55774 89 aa11.6□□□□□ -0.55
TMTC3-202ENST00000547034 ATXN8Q156A1 80 aa11.6□□□□□ -0.55
TMTC3-202ENST00000547034 C2orf82Q6UX34 121 aa11.6□□□□□ -0.55
TMTC3-202ENST00000547034 COX6CP09669 75 aa11.6□□□□□ -0.55
TMTC3-202ENST00000547034 CKS1BP61024 79 aa11.6□□□□□ -0.55
TMTC3-202ENST00000547034 CFAP161Q6P656 301 aa11.6□□□□□ -0.55
TMTC3-202ENST00000547034 LINC01600Q96MT4 127 aa11.6□□□□□ -0.55
TMTC3-202ENST00000547034 SND1-IT1Q9HBX3 110 aa11.6□□□□□ -0.55
TMTC3-202ENST00000547034 COX17Q14061 63 aa11.59□□□□□ -0.55
TMTC3-202ENST00000547034 TRAV13-2A0A0B4J235 113 aa11.58□□□□□ -0.56
TMTC3-202ENST00000547034 PFN2P35080 140 aa11.58□□□□□ -0.56
TMTC3-202ENST00000547034 ETDBQ3ZM63 59 aa11.58□□□□□ -0.56
TMTC3-202ENST00000547034 TENM3Q9P273 2699 aa11.58□□□□□ -0.56
TMTC3-202ENST00000547034 IGKV2-28A0A075B6P5 120 aa11.58□□□□□ -0.56
TMTC3-202ENST00000547034 TRAV10A0A0B4J240 114 aa11.58□□□□□ -0.56
TMTC3-202ENST00000547034 IGKV2D-28P01615 120 aa11.58□□□□□ -0.56
TMTC3-202ENST00000547034 CRPP02741 224 aa11.58□□□□□ -0.56
TMTC3-202ENST00000547034 LINC01620Q4KN68 170 aa11.56□□□□□ -0.56
TMTC3-202ENST00000547034 LINC01556Q5JQF7 62 aa11.56□□□□□ -0.56
TMTC3-202ENST00000547034 KRTAP26-1Q6PEX3 210 aa11.56□□□□□ -0.56
TMTC3-202ENST00000547034 UBE2WQ96B02 151 aa11.56□□□□□ -0.56
TMTC3-202ENST00000547034 LINC00337Q8N6G1 96 aa11.56□□□□□ -0.56
TMTC3-202ENST00000547034 C15orf53Q8NAA6 179 aa11.56□□□□□ -0.56
TMTC3-202ENST00000547034 MDFIQ99750 246 aa11.56□□□□□ -0.56
TMTC3-202ENST00000547034 LST1O00453 97 aa11.55□□□□□ -0.56
TMTC3-202ENST00000547034 SPAG11BQ08648 103 aa11.55□□□□□ -0.56
TMTC3-202ENST00000547034 DEFB121Q5J5C9 76 aa11.55□□□□□ -0.56
TMTC3-202ENST00000547034 MUC7Q8TAX7 377 aa11.54□□□□□ -0.56
TMTC3-202ENST00000547034 HUWE1Q7Z6Z7 4374 aaKnown RBP11.54□□□□□ -0.56
TMTC3-202ENST00000547034 C9JAW5 83 aa11.53□□□□□ -0.56
TMTC3-202ENST00000547034 SLC25A20O43772 301 aa11.53□□□□□ -0.56
TMTC3-202ENST00000547034 RPL28P46779 137 aaKnown RBP11.53□□□□□ -0.56
TMTC3-202ENST00000547034 TEN1Q86WV5 123 aa11.53□□□□□ -0.56
TMTC3-202ENST00000547034 MRAPQ8TCY5 172 aa11.53□□□□□ -0.56
TMTC3-202ENST00000547034 CLEC2BQ92478 149 aa11.52□□□□□ -0.57
TMTC3-202ENST00000547034 GVQW2A0A096LPI5 108 aaPredicted RBP11.51□□□□□ -0.57
TMTC3-202ENST00000547034 TRBV10-2A0A0K0K1G8 114 aa11.51□□□□□ -0.57
TMTC3-202ENST00000547034 DNAH10OSP0CZ25 163 aa11.51□□□□□ -0.57
TMTC3-202ENST00000547034 RNF151Q2KHN1 245 aa11.51□□□□□ -0.57
TMTC3-202ENST00000547034 NOTCH1P46531 2555 aa11.51□□□□□ -0.57
TMTC3-202ENST00000547034 J3QR89 54 aa11.5□□□□□ -0.57
TMTC3-202ENST00000547034 NDUFC2O95298 119 aa11.5□□□□□ -0.57
TMTC3-202ENST00000547034 NTN5Q8WTR8 489 aaPredicted RBP11.5□□□□□ -0.57
TMTC3-202ENST00000547034 C10orf25Q5T742 122 aa11.49□□□□□ -0.57
TMTC3-202ENST00000547034 C6orf223Q8N319 242 aa11.49□□□□□ -0.57
TMTC3-202ENST00000547034 ANKRD29Q8N6D5 301 aa11.49□□□□□ -0.57
TMTC3-202ENST00000547034 UNQ6190/PRO20217Q6UXQ8 127 aa11.49□□□□□ -0.57
TMTC3-202ENST00000547034 H3BT86 120 aa11.48□□□□□ -0.57
TMTC3-202ENST00000547034 C9orf116Q5BN46 136 aaPredicted RBP11.48□□□□□ -0.57
TMTC3-202ENST00000547034 PPDPFLQ8WWR9 84 aa11.47□□□□□ -0.57
TMTC3-202ENST00000547034 CARD19Q96LW7 228 aa11.46□□□□□ -0.57
TMTC3-202ENST00000547034 VPS25Q9BRG1 176 aa11.46□□□□□ -0.57
TMTC3-202ENST00000547034 CBY1Q9Y3M2 126 aa11.46□□□□□ -0.57
TMTC3-202ENST00000547034 SMIM11BQ8TCY0 68 aa11.46□□□□□ -0.58
TMTC3-202ENST00000547034 LINC00588Q9Y4M8 146 aa11.46□□□□□ -0.58
TMTC3-202ENST00000547034 TRACP01848 142 aa11.45□□□□□ -0.58
TMTC3-202ENST00000547034 LINC00526Q96FQ7 95 aa11.44□□□□□ -0.58
TMTC3-202ENST00000547034 C1orf43Q9BWL3 253 aa11.44□□□□□ -0.58
TMTC3-202ENST00000547034 NBEAL1Q6ZS30 2694 aa11.44□□□□□ -0.58
TMTC3-202ENST00000547034 C15orf56Q8N910 161 aa11.44□□□□□ -0.58
TMTC3-202ENST00000547034 C6orf48Q9UBA6 75 aa11.43□□□□□ -0.58
TMTC3-202ENST00000547034 C2orf48Q96LS8 159 aa11.42□□□□□ -0.58
TMTC3-202ENST00000547034 UPK3BQ9BT76 320 aa11.42□□□□□ -0.58
TMTC3-202ENST00000547034 F8WDY8 70 aa11.42□□□□□ -0.58
TMTC3-202ENST00000547034 FAM218AQ96MZ4 157 aa11.42□□□□□ -0.58
TMTC3-202ENST00000547034 B9D2Q9BPU9 175 aa11.41□□□□□ -0.58
TMTC3-202ENST00000547034 H0YGX0 51 aa11.4□□□□□ -0.58
TMTC3-202ENST00000547034 ZNF561-AS1K7EIQ3 104 aa11.4□□□□□ -0.58
TMTC3-202ENST00000547034 Q8NDZ9 215 aa11.4□□□□□ -0.58
TMTC3-202ENST00000547034 IGKV2D-24A0A075B6R9 120 aa11.39□□□□□ -0.59
TMTC3-202ENST00000547034 HIGD2BQ4VC39 106 aa11.39□□□□□ -0.59
TMTC3-202ENST00000547034 OR13C6PQ8NH95 151 aa11.39□□□□□ -0.59
TMTC3-202ENST00000547034 MGAM2Q2M2H8 2515 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms