RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 ICOSQ9Y6W8 199 aa8.81□□□□□ -1
SCAF11-209ENST00000547018 M0QXV9 152 aa8.81□□□□□ -1
SCAF11-209ENST00000547018 SLC25A20O43772 301 aa8.81□□□□□ -1
SCAF11-209ENST00000547018 IGLV5-39A0A0G2JS06 123 aa8.8□□□□□ -1
SCAF11-209ENST00000547018 SMIM9A6NGZ8 99 aa8.8□□□□□ -1
SCAF11-209ENST00000547018 Q6ZTC4 211 aa8.8□□□□□ -1
SCAF11-209ENST00000547018 CSDC2Q9Y534 153 aaKnown RBP8.8□□□□□ -1
SCAF11-209ENST00000547018 LYRM9A8MSI8 78 aa8.8□□□□□ -1
SCAF11-209ENST00000547018 COX6CP09669 75 aa8.8□□□□□ -1
SCAF11-209ENST00000547018 IGHV3OR16-9A0A0B4J2B5 98 aa8.79□□□□□ -1
SCAF11-209ENST00000547018 NANOS2P60321 138 aaKnown RBP8.79□□□□□ -1
SCAF11-209ENST00000547018 REG3AQ06141 175 aa8.79□□□□□ -1
SCAF11-209ENST00000547018 ANKRD29Q8N6D5 301 aa8.79□□□□□ -1
SCAF11-209ENST00000547018 ANK2Q01484 3957 aa8.79□□□□□ -1
SCAF11-209ENST00000547018 IGLV5-45A0A087WSX0 123 aa8.79□□□□□ -1
SCAF11-209ENST00000547018 NTN5Q8WTR8 489 aaPredicted RBP8.79□□□□□ -1
SCAF11-209ENST00000547018 CHCHD10Q8WYQ3 142 aaPredicted RBP8.79□□□□□ -1
SCAF11-209ENST00000547018 PRO0461Q9UI25 63 aa8.79□□□□□ -1
SCAF11-209ENST00000547018 A0A0B4J2C4 111 aa8.78□□□□□ -1
SCAF11-209ENST00000547018 J3QR89 54 aa8.78□□□□□ -1
SCAF11-209ENST00000547018 SND1-IT1Q9HBX3 110 aa8.78□□□□□ -1
SCAF11-209ENST00000547018 MRPL23Q16540 153 aaKnown RBP8.78□□□□□ -1
SCAF11-209ENST00000547018 C6orf223Q8N319 242 aa8.78□□□□□ -1
SCAF11-209ENST00000547018 A0A0J9YWU9 116 aa8.77□□□□□ -1.01
SCAF11-209ENST00000547018 MIFP14174 115 aa8.77□□□□□ -1.01
SCAF11-209ENST00000547018 WFDC9Q8NEX5 89 aa8.77□□□□□ -1.01
SCAF11-209ENST00000547018 SPANXDQ9BXN6 97 aa8.77□□□□□ -1.01
SCAF11-209ENST00000547018 SPANXCQ9NY87 97 aa8.77□□□□□ -1.01
SCAF11-209ENST00000547018 TEX49A0A1B0GTD5 131 aa8.76□□□□□ -1.01
SCAF11-209ENST00000547018 LINC01620Q4KN68 170 aa8.76□□□□□ -1.01
SCAF11-209ENST00000547018 ATXN8Q156A1 80 aa8.76□□□□□ -1.01
SCAF11-209ENST00000547018 Q9HAA7 133 aa8.76□□□□□ -1.01
SCAF11-209ENST00000547018 TRBV20-1A0A075B6N2 111 aa8.76□□□□□ -1.01
SCAF11-209ENST00000547018 FOXI1Q12951 378 aa8.75□□□□□ -1.01
SCAF11-209ENST00000547018 COX7A2LO14548 114 aa8.74□□□□□ -1.01
SCAF11-209ENST00000547018 CRPP02741 224 aa8.74□□□□□ -1.01
SCAF11-209ENST00000547018 HIGD2BQ4VC39 106 aa8.74□□□□□ -1.01
SCAF11-209ENST00000547018 KPRPQ5T749 579 aaPredicted RBP8.74□□□□□ -1.01
SCAF11-209ENST00000547018 WFDC10BQ8IUB3 73 aa8.74□□□□□ -1.01
SCAF11-209ENST00000547018 CARD19Q96LW7 228 aa8.74□□□□□ -1.01
SCAF11-209ENST00000547018 A0A087WZ39 114 aa8.74□□□□□ -1.01
SCAF11-209ENST00000547018 CCL18P55774 89 aa8.74□□□□□ -1.01
SCAF11-209ENST00000547018 LINC00612Q8N6U2 182 aa8.73□□□□□ -1.01
SCAF11-209ENST00000547018 IFITM1P13164 125 aa8.72□□□□□ -1.01
SCAF11-209ENST00000547018 LINC00337Q8N6G1 96 aa8.72□□□□□ -1.01
SCAF11-209ENST00000547018 PPDPFQ9H3Y8 114 aa8.72□□□□□ -1.01
SCAF11-209ENST00000547018 H7C423 109 aa8.72□□□□□ -1.01
SCAF11-209ENST00000547018 TEN1Q86WV5 123 aa8.72□□□□□ -1.01
SCAF11-209ENST00000547018 UNQ6190/PRO20217Q6UXQ8 127 aa8.71□□□□□ -1.01
SCAF11-209ENST00000547018 C10orf25Q5T742 122 aa8.71□□□□□ -1.02
SCAF11-209ENST00000547018 XAGE1AQ9HD64 81 aa8.71□□□□□ -1.02
SCAF11-209ENST00000547018 ANAPC13Q9BS18 74 aa8.7□□□□□ -1.02
SCAF11-209ENST00000547018 DEFB131BA0A096LNP1 70 aa8.7□□□□□ -1.02
SCAF11-209ENST00000547018 TRBV30A0A0K0K1B3 111 aa8.7□□□□□ -1.02
SCAF11-209ENST00000547018 NCR3O14931 201 aa8.7□□□□□ -1.02
SCAF11-209ENST00000547018 SLPIP03973 132 aa8.7□□□□□ -1.02
SCAF11-209ENST00000547018 LYPD5Q6UWN5 251 aa8.69□□□□□ -1.02
SCAF11-209ENST00000547018 C11orf45Q8TAV5 145 aa8.69□□□□□ -1.02
SCAF11-209ENST00000547018 PPDPFLQ8WWR9 84 aa8.69□□□□□ -1.02
SCAF11-209ENST00000547018 TIMM17BO60830 172 aa8.69□□□□□ -1.02
SCAF11-209ENST00000547018 SPAG11BQ08648 103 aa8.69□□□□□ -1.02
SCAF11-209ENST00000547018 IGKV2D-24A0A075B6R9 120 aa8.68□□□□□ -1.02
SCAF11-209ENST00000547018 A0A1B0GUV1 79 aa8.68□□□□□ -1.02
SCAF11-209ENST00000547018 CD164L2Q6UWJ8 174 aa8.68□□□□□ -1.02
SCAF11-209ENST00000547018 FAM218AQ96MZ4 157 aa8.68□□□□□ -1.02
SCAF11-209ENST00000547018 IGKV2-28A0A075B6P5 120 aa8.67□□□□□ -1.02
SCAF11-209ENST00000547018 IGKV2D-28P01615 120 aa8.67□□□□□ -1.02
SCAF11-209ENST00000547018 SPATA25Q9BR10 227 aa8.67□□□□□ -1.02
SCAF11-209ENST00000547018 LELP1Q5T871 98 aa8.67□□□□□ -1.02
SCAF11-209ENST00000547018 SMIM11BQ8TCY0 68 aa8.67□□□□□ -1.02
SCAF11-209ENST00000547018 CSMD3Q7Z407 3707 aa8.66□□□□□ -1.02
SCAF11-209ENST00000547018 LECT2O14960 151 aa8.66□□□□□ -1.02
SCAF11-209ENST00000547018 MT-ATP8P03928 68 aa8.66□□□□□ -1.02
SCAF11-209ENST00000547018 ESRGQ1W209 222 aa8.66□□□□□ -1.02
SCAF11-209ENST00000547018 COPS9Q8WXC6 57 aa8.65□□□□□ -1.02
SCAF11-209ENST00000547018 TRAV8-4A0A0B4J246 113 aa8.65□□□□□ -1.02
SCAF11-209ENST00000547018 TRBV10-2A0A0K0K1G8 114 aa8.65□□□□□ -1.03
SCAF11-209ENST00000547018 IBA57-AS1B1ANH7 110 aa8.65□□□□□ -1.03
SCAF11-209ENST00000547018 LST1O00453 97 aa8.64□□□□□ -1.03
SCAF11-209ENST00000547018 DNAL4O96015 105 aa8.64□□□□□ -1.03
SCAF11-209ENST00000547018 GAGE2EQ4V326 116 aa8.64□□□□□ -1.03
SCAF11-209ENST00000547018 ENHOQ6UWT2 76 aa8.64□□□□□ -1.03
SCAF11-209ENST00000547018 GAGE2DQ9UEU5 116 aa8.64□□□□□ -1.03
SCAF11-209ENST00000547018 FAM19A3Q7Z5A8 133 aa8.64□□□□□ -1.03
SCAF11-209ENST00000547018 BAALC-AS2P0C853 105 aa8.63□□□□□ -1.03
SCAF11-209ENST00000547018 COL7A1Q02388 2944 aa8.63□□□□□ -1.03
SCAF11-209ENST00000547018 A0A087WYN8 130 aa8.63□□□□□ -1.03
SCAF11-209ENST00000547018 TRAV13-2A0A0B4J235 113 aa8.63□□□□□ -1.03
SCAF11-209ENST00000547018 ZNF561-AS1K7EIQ3 104 aa8.63□□□□□ -1.03
SCAF11-209ENST00000547018 S100A7L2Q5SY68 101 aa8.63□□□□□ -1.03
SCAF11-209ENST00000547018 RPL18AQ02543 176 aaKnown RBP8.62□□□□□ -1.03
SCAF11-209ENST00000547018 Q8IZM0 81 aa8.62□□□□□ -1.03
SCAF11-209ENST00000547018 CCDC179H3BU77 68 aa8.61□□□□□ -1.03
SCAF11-209ENST00000547018 XGP55808 180 aa8.61□□□□□ -1.03
SCAF11-209ENST00000547018 KIAA0087Q14695 138 aa8.61□□□□□ -1.03
SCAF11-209ENST00000547018 C5orf47Q569G3 176 aa8.6□□□□□ -1.03
SCAF11-209ENST00000547018 TTC32Q5I0X7 151 aa8.6□□□□□ -1.03
SCAF11-209ENST00000547018 CAMK2N2Q96S95 79 aa8.6□□□□□ -1.03
SCAF11-209ENST00000547018 C15orf53Q8NAA6 179 aa8.59□□□□□ -1.03
SCAF11-209ENST00000547018 CDIP1Q9H305 208 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms