RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 DSCR8Q96T75 97 aa10.4□□□□□ -0.74
HOXC11-202ENST00000546378 PKD1L1Q8TDX9 2849 aa10.39□□□□□ -0.75
HOXC11-202ENST00000546378 CXCL5P42830 114 aa10.39□□□□□ -0.75
HOXC11-202ENST00000546378 CCL18P55774 89 aa10.39□□□□□ -0.75
HOXC11-202ENST00000546378 RNF152Q8N8N0 203 aa10.39□□□□□ -0.75
HOXC11-202ENST00000546378 KIR2DL5BQ8NHK3 375 aa10.39□□□□□ -0.75
HOXC11-202ENST00000546378 SCXQ7RTU7 201 aa10.38□□□□□ -0.75
HOXC11-202ENST00000546378 CDC42SE2Q9NRR3 84 aa10.38□□□□□ -0.75
HOXC11-202ENST00000546378 CYSTM1Q9H1C7 97 aa10.38□□□□□ -0.75
HOXC11-202ENST00000546378 LINC00846Q9NV44 126 aa10.38□□□□□ -0.75
HOXC11-202ENST00000546378 CCL24O00175 119 aa10.37□□□□□ -0.75
HOXC11-202ENST00000546378 DNAJC30Q96LL9 226 aa10.37□□□□□ -0.75
HOXC11-202ENST00000546378 NSD1Q96L73 2696 aaPredicted RBP10.36□□□□□ -0.75
HOXC11-202ENST00000546378 HAMPP81172 84 aa10.36□□□□□ -0.75
HOXC11-202ENST00000546378 LINC00269Q8N2A0 174 aa10.36□□□□□ -0.75
HOXC11-202ENST00000546378 TENM1Q9UKZ4 2725 aa10.35□□□□□ -0.75
HOXC11-202ENST00000546378 GYPEP15421 78 aa10.35□□□□□ -0.75
HOXC11-202ENST00000546378 LINC00482Q8N8I6 264 aa10.35□□□□□ -0.75
HOXC11-202ENST00000546378 LAMTOR3Q9UHA4 124 aa10.35□□□□□ -0.75
HOXC11-202ENST00000546378 COL6A5A8TX70 2615 aa10.35□□□□□ -0.75
HOXC11-202ENST00000546378 MAST4O15021 2626 aa10.35□□□□□ -0.75
HOXC11-202ENST00000546378 LINC00643Q86TS7 51 aa10.34□□□□□ -0.75
HOXC11-202ENST00000546378 IGKV2-28A0A075B6P5 120 aa10.34□□□□□ -0.75
HOXC11-202ENST00000546378 IGKV2D-28P01615 120 aa10.34□□□□□ -0.75
HOXC11-202ENST00000546378 ANGP03950 147 aaKnown RBP10.33□□□□□ -0.76
HOXC11-202ENST00000546378 LINC01006Q8NI28 216 aa10.33□□□□□ -0.76
HOXC11-202ENST00000546378 TMEM126AQ9H061 195 aa10.33□□□□□ -0.76
HOXC11-202ENST00000546378 TRAV13-2A0A0B4J235 113 aa10.32□□□□□ -0.76
HOXC11-202ENST00000546378 ENHOQ6UWT2 76 aa10.32□□□□□ -0.76
HOXC11-202ENST00000546378 FAM19A1Q7Z5A9 133 aa10.32□□□□□ -0.76
HOXC11-202ENST00000546378 S100A7L2Q5SY68 101 aa10.32□□□□□ -0.76
HOXC11-202ENST00000546378 C3orf22Q8N5N4 141 aa10.32□□□□□ -0.76
HOXC11-202ENST00000546378 FBN1P35555 2871 aaKnown RBP10.32□□□□□ -0.76
HOXC11-202ENST00000546378 INAFM2P0DMQ5 153 aa10.31□□□□□ -0.76
HOXC11-202ENST00000546378 KLK9Q2XQG4 91 aa10.31□□□□□ -0.76
HOXC11-202ENST00000546378 XAGE1AQ9HD64 81 aa10.3□□□□□ -0.76
HOXC11-202ENST00000546378 BRI3O95415 125 aa10.29□□□□□ -0.76
HOXC11-202ENST00000546378 PRB2P02812 416 aaPredicted RBP10.29□□□□□ -0.76
HOXC11-202ENST00000546378 C20orf197Q8N268 126 aa10.29□□□□□ -0.76
HOXC11-202ENST00000546378 IGLV5-39A0A0G2JS06 123 aa10.28□□□□□ -0.76
HOXC11-202ENST00000546378 F5H768 121 aa10.28□□□□□ -0.76
HOXC11-202ENST00000546378 TMEM86BQ8N661 226 aa10.28□□□□□ -0.76
HOXC11-202ENST00000546378 C6orf223Q8N319 242 aa10.28□□□□□ -0.76
HOXC11-202ENST00000546378 COPS9Q8WXC6 57 aa10.27□□□□□ -0.76
HOXC11-202ENST00000546378 TRACP01848 142 aa10.27□□□□□ -0.77
HOXC11-202ENST00000546378 C6orf99Q4VX62 202 aa10.27□□□□□ -0.77
HOXC11-202ENST00000546378 DEFB135Q30KP9 77 aa10.26□□□□□ -0.77
HOXC11-202ENST00000546378 Q6Q795 121 aa10.26□□□□□ -0.77
HOXC11-202ENST00000546378 MGAM2Q2M2H8 2515 aa10.26□□□□□ -0.77
HOXC11-202ENST00000546378 STAB1Q9NY15 2570 aa10.26□□□□□ -0.77
HOXC11-202ENST00000546378 PF4P02776 101 aa10.26□□□□□ -0.77
HOXC11-202ENST00000546378 RPL18AQ02543 176 aaKnown RBP10.26□□□□□ -0.77
HOXC11-202ENST00000546378 SNURFQ9Y675 71 aa10.26□□□□□ -0.77
HOXC11-202ENST00000546378 FAM19A5Q7Z5A7 132 aaPredicted RBP10.25□□□□□ -0.77
HOXC11-202ENST00000546378 ORMDL1Q9P0S3 153 aa10.25□□□□□ -0.77
HOXC11-202ENST00000546378 USP17L23D6RBM5 183 aa10.25□□□□□ -0.77
HOXC11-202ENST00000546378 UQCRQO14949 82 aa10.25□□□□□ -0.77
HOXC11-202ENST00000546378 C4orf3Q8WVX3 66 aa10.25□□□□□ -0.77
HOXC11-202ENST00000546378 TRBV6-8A0A0A6YYG3 113 aa10.25□□□□□ -0.77
HOXC11-202ENST00000546378 GHRHP01286 108 aa10.24□□□□□ -0.77
HOXC11-202ENST00000546378 FAM110AQ9BQ89 295 aa10.24□□□□□ -0.77
HOXC11-202ENST00000546378 C22orf24Q9Y442 160 aa10.24□□□□□ -0.77
HOXC11-202ENST00000546378 TRBV7-7A0A0K0K1E9 115 aa10.24□□□□□ -0.77
HOXC11-202ENST00000546378 TIMM17BO60830 172 aa10.24□□□□□ -0.77
HOXC11-202ENST00000546378 TRRAPQ9Y4A5 3859 aa10.23□□□□□ -0.77
HOXC11-202ENST00000546378 ACYP1P07311 99 aa10.23□□□□□ -0.77
HOXC11-202ENST00000546378 SPATA3Q8NHX4 192 aa10.23□□□□□ -0.77
HOXC11-202ENST00000546378 LINC00959A0A1B0GUT2 108 aa10.22□□□□□ -0.77
HOXC11-202ENST00000546378 FAM240AA0A1B0GVK7 77 aa10.22□□□□□ -0.77
HOXC11-202ENST00000546378 COX7CP15954 63 aa10.22□□□□□ -0.77
HOXC11-202ENST00000546378 SS18Q15532 418 aa10.22□□□□□ -0.77
HOXC11-202ENST00000546378 DAD1P61803 113 aa10.22□□□□□ -0.77
HOXC11-202ENST00000546378 HRCT1Q6UXD1 115 aa10.22□□□□□ -0.77
HOXC11-202ENST00000546378 BEAN1Q3B7T3 259 aa10.21□□□□□ -0.77
HOXC11-202ENST00000546378 TRBV10-1A0A0K0K1A3 114 aa10.21□□□□□ -0.78
HOXC11-202ENST00000546378 ANK3Q12955 4377 aaKnown RBP10.2□□□□□ -0.78
HOXC11-202ENST00000546378 IGLV5-45A0A087WSX0 123 aa10.2□□□□□ -0.78
HOXC11-202ENST00000546378 IGHV4-28A0A0C4DH34 117 aa10.2□□□□□ -0.78
HOXC11-202ENST00000546378 M0R2N4 97 aa10.2□□□□□ -0.78
HOXC11-202ENST00000546378 HIGD2BQ4VC39 106 aa10.2□□□□□ -0.78
HOXC11-202ENST00000546378 DEFB105AQ8NG35 78 aa10.2□□□□□ -0.78
HOXC11-202ENST00000546378 RPL28P46779 137 aaKnown RBP10.19□□□□□ -0.78
HOXC11-202ENST00000546378 KLK12Q9UKR0 248 aa10.19□□□□□ -0.78
HOXC11-202ENST00000546378 IGHV3OR16-9A0A0B4J2B5 98 aa10.19□□□□□ -0.78
HOXC11-202ENST00000546378 UNQ6190/PRO20217Q6UXQ8 127 aa10.19□□□□□ -0.78
HOXC11-202ENST00000546378 FAM222AQ5U5X8 452 aa10.18□□□□□ -0.78
HOXC11-202ENST00000546378 ATOX1O00244 68 aa10.18□□□□□ -0.78
HOXC11-202ENST00000546378 C4orf26Q17RF5 130 aa10.18□□□□□ -0.78
HOXC11-202ENST00000546378 Q8N9L7 120 aa10.18□□□□□ -0.78
HOXC11-202ENST00000546378 TRAV25A0A0B4J276 109 aa10.18□□□□□ -0.78
HOXC11-202ENST00000546378 LINC01561Q8N1V8 128 aa10.18□□□□□ -0.78
HOXC11-202ENST00000546378 FHL2Q14192 279 aa10.17□□□□□ -0.78
HOXC11-202ENST00000546378 C10orf25Q5T742 122 aa10.17□□□□□ -0.78
HOXC11-202ENST00000546378 GIG44P09565 113 aaPredicted RBP10.17□□□□□ -0.78
HOXC11-202ENST00000546378 C16orf74Q96GX8 76 aa10.16□□□□□ -0.78
HOXC11-202ENST00000546378 CHCHD10Q8WYQ3 142 aaPredicted RBP10.16□□□□□ -0.78
HOXC11-202ENST00000546378 UPK3BQ9BT76 320 aa10.16□□□□□ -0.78
HOXC11-202ENST00000546378 CSDC2Q9Y534 153 aaKnown RBP10.16□□□□□ -0.78
HOXC11-202ENST00000546378 J3KT08 172 aa10.15□□□□□ -0.78
HOXC11-202ENST00000546378 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms