RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.81□□□□□ -1.64
NECAP1-208ENST00000545807 USMG5Q96IX5 58 aa4.81□□□□□ -1.64
NECAP1-208ENST00000545807 IGHV7-4-1A0A0J9YVY3 117 aa4.8□□□□□ -1.64
NECAP1-208ENST00000545807 S100A7L2Q5SY68 101 aa4.8□□□□□ -1.64
NECAP1-208ENST00000545807 SOSTDC1Q6X4U4 206 aa4.8□□□□□ -1.64
NECAP1-208ENST00000545807 NOTCH1P46531 2555 aa4.8□□□□□ -1.64
NECAP1-208ENST00000545807 TRAV12-3A0A0B4J271 114 aa4.79□□□□□ -1.64
NECAP1-208ENST00000545807 Q1T7F1 81 aa4.79□□□□□ -1.64
NECAP1-208ENST00000545807 CD164L2Q6UWJ8 174 aa4.79□□□□□ -1.64
NECAP1-208ENST00000545807 LINC00588Q9Y4M8 146 aa4.79□□□□□ -1.64
NECAP1-208ENST00000545807 ADARB2-AS1A8MUL3 147 aa4.79□□□□□ -1.64
NECAP1-208ENST00000545807 NDUFA4O00483 81 aa4.79□□□□□ -1.64
NECAP1-208ENST00000545807 CD28P10747 220 aa4.79□□□□□ -1.64
NECAP1-208ENST00000545807 MIFP14174 115 aa4.79□□□□□ -1.64
NECAP1-208ENST00000545807 IGKV3D-20A0A0C4DH25 116 aa4.79□□□□□ -1.64
NECAP1-208ENST00000545807 C8orf87E5RJ46 101 aa4.78□□□□□ -1.64
NECAP1-208ENST00000545807 K7EMT4 169 aa4.78□□□□□ -1.64
NECAP1-208ENST00000545807 M0R378 163 aa4.78□□□□□ -1.64
NECAP1-208ENST00000545807 HTN1P15515 57 aa4.78□□□□□ -1.64
NECAP1-208ENST00000545807 C11orf68Q9H3H3 251 aaKnown RBP4.78□□□□□ -1.64
NECAP1-208ENST00000545807 SNURFQ9Y675 71 aa4.78□□□□□ -1.64
NECAP1-208ENST00000545807 ANK3Q12955 4377 aaKnown RBP4.78□□□□□ -1.64
NECAP1-208ENST00000545807 FAM218AQ96MZ4 157 aa4.78□□□□□ -1.64
NECAP1-208ENST00000545807 C14orf132Q9NPU4 83 aa4.77□□□□□ -1.65
NECAP1-208ENST00000545807 TRBV7-4A0A0J9YYF1 115 aa4.77□□□□□ -1.65
NECAP1-208ENST00000545807 PPP1R17O96001 155 aa4.77□□□□□ -1.65
NECAP1-208ENST00000545807 C9orf129Q5T035 196 aaKnown RBP4.77□□□□□ -1.65
NECAP1-208ENST00000545807 GPHB5Q86YW7 130 aa4.77□□□□□ -1.65
NECAP1-208ENST00000545807 RPL39LQ96EH5 51 aaKnown RBP4.77□□□□□ -1.65
NECAP1-208ENST00000545807 H3BUA1 57 aa4.77□□□□□ -1.65
NECAP1-208ENST00000545807 IGHV3-30-3P0DP02 117 aa4.77□□□□□ -1.65
NECAP1-208ENST00000545807 LINC01006Q8NI28 216 aa4.77□□□□□ -1.65
NECAP1-208ENST00000545807 C11orf21Q9P2W6 132 aa4.76□□□□□ -1.65
NECAP1-208ENST00000545807 NBEAL1Q6ZS30 2694 aa4.75□□□□□ -1.65
NECAP1-208ENST00000545807 CYSRT1A8MQ03 144 aa4.75□□□□□ -1.65
NECAP1-208ENST00000545807 NDUFS5O43920 106 aa4.75□□□□□ -1.65
NECAP1-208ENST00000545807 PRR9Q5T870 116 aa4.75□□□□□ -1.65
NECAP1-208ENST00000545807 ENHOQ6UWT2 76 aa4.75□□□□□ -1.65
NECAP1-208ENST00000545807 Q6ZVQ6 151 aa4.75□□□□□ -1.65
NECAP1-208ENST00000545807 DYNLRB2Q8TF09 96 aa4.75□□□□□ -1.65
NECAP1-208ENST00000545807 DEFB104AQ8WTQ1 72 aa4.75□□□□□ -1.65
NECAP1-208ENST00000545807 OVOL2Q9BRP0 275 aa4.75□□□□□ -1.65
NECAP1-208ENST00000545807 ZNF580Q9UK33 172 aa4.75□□□□□ -1.65
NECAP1-208ENST00000545807 PRM2P04554 102 aa4.75□□□□□ -1.65
NECAP1-208ENST00000545807 A0A087WZ39 114 aa4.75□□□□□ -1.65
NECAP1-208ENST00000545807 ERC2-IT1O76042 136 aa4.75□□□□□ -1.65
NECAP1-208ENST00000545807 KLK9Q2XQG4 91 aa4.75□□□□□ -1.65
NECAP1-208ENST00000545807 PHF5AQ7RTV0 110 aaKnown RBP4.75□□□□□ -1.65
NECAP1-208ENST00000545807 WFDC9Q8NEX5 89 aa4.75□□□□□ -1.65
NECAP1-208ENST00000545807 KLK9Q9UKQ9 250 aa4.75□□□□□ -1.65
NECAP1-208ENST00000545807 SOCS3O14543 225 aa4.74□□□□□ -1.65
NECAP1-208ENST00000545807 POLR2KP53803 58 aaKnown RBP4.74□□□□□ -1.65
NECAP1-208ENST00000545807 RPL39P62891 51 aaKnown RBP4.74□□□□□ -1.65
NECAP1-208ENST00000545807 SPANXN1Q5VSR9 72 aa4.74□□□□□ -1.65
NECAP1-208ENST00000545807 Q6ZTC4 211 aa4.74□□□□□ -1.65
NECAP1-208ENST00000545807 NDUFA12Q9UI09 145 aa4.74□□□□□ -1.65
NECAP1-208ENST00000545807 LYRM9A8MSI8 78 aa4.74□□□□□ -1.65
NECAP1-208ENST00000545807 DEFB131AP59861 70 aa4.74□□□□□ -1.65
NECAP1-208ENST00000545807 Q6ZRP5 223 aa4.74□□□□□ -1.65
NECAP1-208ENST00000545807 PRR26Q8N8Z3 221 aa4.74□□□□□ -1.65
NECAP1-208ENST00000545807 ZNF625Q96I27 306 aaPredicted RBP4.74□□□□□ -1.65
NECAP1-208ENST00000545807 IGHV3-64A0A075B6Q5 118 aa4.73□□□□□ -1.65
NECAP1-208ENST00000545807 CCL24O00175 119 aa4.73□□□□□ -1.65
NECAP1-208ENST00000545807 SPINK13Q1W4C9 94 aa4.73□□□□□ -1.65
NECAP1-208ENST00000545807 MGAM2Q2M2H8 2515 aa4.73□□□□□ -1.65
NECAP1-208ENST00000545807 ZNF73O43830 326 aaPredicted RBP4.73□□□□□ -1.65
NECAP1-208ENST00000545807 PKD1L1Q8TDX9 2849 aa4.73□□□□□ -1.65
NECAP1-208ENST00000545807 IGHV3OR16-12A0A075B7B8 117 aa4.72□□□□□ -1.65
NECAP1-208ENST00000545807 GNRH2O43555 120 aa4.72□□□□□ -1.65
NECAP1-208ENST00000545807 S100A4P26447 101 aaKnown RBP4.72□□□□□ -1.65
NECAP1-208ENST00000545807 UBE2BP63146 152 aa4.72□□□□□ -1.65
NECAP1-208ENST00000545807 SPATA3Q8NHX4 192 aa4.72□□□□□ -1.65
NECAP1-208ENST00000545807 OPRPNQ99935 248 aaPredicted RBP4.72□□□□□ -1.65
NECAP1-208ENST00000545807 Q9HAA7 133 aa4.72□□□□□ -1.65
NECAP1-208ENST00000545807 PHLDA3Q9Y5J5 127 aa4.72□□□□□ -1.65
NECAP1-208ENST00000545807 TRRAPQ9Y4A5 3859 aa4.72□□□□□ -1.65
NECAP1-208ENST00000545807 RNASE1P07998 156 aaKnown RBP4.72□□□□□ -1.65
NECAP1-208ENST00000545807 FBN1P35555 2871 aaKnown RBP4.72□□□□□ -1.65
NECAP1-208ENST00000545807 TRAV10A0A0B4J240 114 aa4.72□□□□□ -1.65
NECAP1-208ENST00000545807 hDV103S1A0JD37 113 aa4.72□□□□□ -1.65
NECAP1-208ENST00000545807 TMEM256-PLSCR3K7ERE1 68 aa4.72□□□□□ -1.65
NECAP1-208ENST00000545807 LINC00308Q8TCZ7 52 aa4.72□□□□□ -1.65
NECAP1-208ENST00000545807 WFDC10AQ9H1F0 79 aa4.72□□□□□ -1.65
NECAP1-208ENST00000545807 C4orf3Q8WVX3 66 aa4.71□□□□□ -1.66
NECAP1-208ENST00000545807 A0A0J9YXV3 536 aa4.71□□□□□ -1.66
NECAP1-208ENST00000545807 VCYO14598 125 aa4.71□□□□□ -1.66
NECAP1-208ENST00000545807 PIK3CD-AS1Q5SR53 167 aa4.71□□□□□ -1.66
NECAP1-208ENST00000545807 C9orf47Q6ZRZ4 202 aa4.71□□□□□ -1.66
NECAP1-208ENST00000545807 KRTAP10-3P60369 221 aa4.7□□□□□ -1.66
NECAP1-208ENST00000545807 MUC4Q99102 2169 aa4.7□□□□□ -1.66
NECAP1-208ENST00000545807 K7EQG2 157 aa4.7□□□□□ -1.66
NECAP1-208ENST00000545807 MED14OSP0DP75 135 aa4.7□□□□□ -1.66
NECAP1-208ENST00000545807 ZFAND2AQ8N6M9 145 aa4.7□□□□□ -1.66
NECAP1-208ENST00000545807 LINC00315P59091 139 aa4.7□□□□□ -1.66
NECAP1-208ENST00000545807 TMEM254Q8TBM7 123 aa4.7□□□□□ -1.66
NECAP1-208ENST00000545807 TRBV6-5A0A0K0K1A5 114 aa4.69□□□□□ -1.66
NECAP1-208ENST00000545807 A6NN06 94 aa4.69□□□□□ -1.66
NECAP1-208ENST00000545807 NDUFA1O15239 70 aa4.69□□□□□ -1.66
NECAP1-208ENST00000545807 FUSP35637 526 aaKnown RBP eCLIP4.69□□□□□ -1.66
NECAP1-208ENST00000545807 SYCNQ0VAF6 134 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms