RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 TNXBP22105 4242 aa12.15□□□□□ -0.46
CHD4-213ENST00000545584 ODF1Q14990 250 aa12.14□□□□□ -0.47
CHD4-213ENST00000545584 SCGB3A1Q96QR1 104 aa12.14□□□□□ -0.47
CHD4-213ENST00000545584 ERASQ7Z444 233 aa12.13□□□□□ -0.47
CHD4-213ENST00000545584 CDKN2A-AS1Q9UH64 79 aa12.13□□□□□ -0.47
CHD4-213ENST00000545584 LINC01549A6NIU2 74 aa12.12□□□□□ -0.47
CHD4-213ENST00000545584 C9orf129Q5T035 196 aaKnown RBP12.12□□□□□ -0.47
CHD4-213ENST00000545584 GNB1LQ9BYB4 327 aa12.12□□□□□ -0.47
CHD4-213ENST00000545584 COX19Q49B96 90 aa12.11□□□□□ -0.47
CHD4-213ENST00000545584 KRTAP11-1Q8IUC1 163 aa12.11□□□□□ -0.47
CHD4-213ENST00000545584 KRTAP7-1Q8IUC3 87 aa12.11□□□□□ -0.47
CHD4-213ENST00000545584 F8VRH5 84 aa12.09□□□□□ -0.47
CHD4-213ENST00000545584 H0Y9J4 135 aa12.09□□□□□ -0.47
CHD4-213ENST00000545584 CXCL5P42830 114 aa12.09□□□□□ -0.47
CHD4-213ENST00000545584 LINC00469Q8N7U9 141 aa12.09□□□□□ -0.47
CHD4-213ENST00000545584 C10orf91Q5T1B1 145 aa12.08□□□□□ -0.48
CHD4-213ENST00000545584 SMCO4Q9NRQ5 59 aa12.07□□□□□ -0.48
CHD4-213ENST00000545584 TINCRA0A1B0GVN0 87 aa12.06□□□□□ -0.48
CHD4-213ENST00000545584 FA2HQ7L5A8 372 aa12.06□□□□□ -0.48
CHD4-213ENST00000545584 XAGE1AQ9HD64 81 aa12.06□□□□□ -0.48
CHD4-213ENST00000545584 UBR4Q5T4S7 5183 aa12.06□□□□□ -0.48
CHD4-213ENST00000545584 LINC01546A6NGU7 62 aa12.05□□□□□ -0.48
CHD4-213ENST00000545584 FABP9Q0Z7S8 132 aa12.05□□□□□ -0.48
CHD4-213ENST00000545584 LBHQ53QV2 105 aaPredicted RBP12.05□□□□□ -0.48
CHD4-213ENST00000545584 PDZD11Q5EBL8 140 aa12.05□□□□□ -0.48
CHD4-213ENST00000545584 CARHSP1Q9Y2V2 147 aaKnown RBP12.05□□□□□ -0.48
CHD4-213ENST00000545584 PRR26Q8N8Z3 221 aa12.04□□□□□ -0.48
CHD4-213ENST00000545584 MRPL18Q9H0U6 180 aaKnown RBP12.04□□□□□ -0.48
CHD4-213ENST00000545584 RPS10P5Q9NQ39 176 aa12.04□□□□□ -0.48
CHD4-213ENST00000545584 C22orf24Q9Y442 160 aa12.04□□□□□ -0.48
CHD4-213ENST00000545584 SMIM1B2RUZ4 78 aa12.03□□□□□ -0.48
CHD4-213ENST00000545584 PMVKQ15126 192 aa12.03□□□□□ -0.48
CHD4-213ENST00000545584 RHEBQ15382 184 aa12.03□□□□□ -0.48
CHD4-213ENST00000545584 COX7B2Q8TF08 81 aa12.03□□□□□ -0.48
CHD4-213ENST00000545584 CST9LQ9H4G1 147 aa12.03□□□□□ -0.48
CHD4-213ENST00000545584 IGLV5-45A0A087WSX0 123 aa12.02□□□□□ -0.49
CHD4-213ENST00000545584 IGLV1-50A0A075B6I6 118 aa12.01□□□□□ -0.49
CHD4-213ENST00000545584 NUPR1O60356 82 aa12.01□□□□□ -0.49
CHD4-213ENST00000545584 TP73-AS1Q9UF72 201 aa12□□□□□ -0.49
CHD4-213ENST00000545584 H3BRM9 83 aa11.99□□□□□ -0.49
CHD4-213ENST00000545584 ZNF861PO60384 105 aa11.98□□□□□ -0.49
CHD4-213ENST00000545584 SPINK8P0C7L1 97 aa11.98□□□□□ -0.49
CHD4-213ENST00000545584 MRPL55Q7Z7F7 128 aaKnown RBP11.98□□□□□ -0.49
CHD4-213ENST00000545584 KRTAP1-4P0C5Y4 121 aa11.96□□□□□ -0.49
CHD4-213ENST00000545584 RPL13AP40429 203 aaKnown RBP11.96□□□□□ -0.49
CHD4-213ENST00000545584 LRP2P98164 4655 aa11.95□□□□□ -0.5
CHD4-213ENST00000545584 APOC3P02656 99 aa11.95□□□□□ -0.5
CHD4-213ENST00000545584 NDUFA6P56556 154 aa11.95□□□□□ -0.5
CHD4-213ENST00000545584 TRAPPC1Q9Y5R8 145 aa11.95□□□□□ -0.5
CHD4-213ENST00000545584 ATP5LO75964 103 aa11.94□□□□□ -0.5
CHD4-213ENST00000545584 RAB5BP61020 215 aa11.94□□□□□ -0.5
CHD4-213ENST00000545584 LINC00614P0C842 121 aa11.93□□□□□ -0.5
CHD4-213ENST00000545584 IGLC3P0DOY3 106 aa11.92□□□□□ -0.5
CHD4-213ENST00000545584 RPL28P46779 137 aaKnown RBP11.92□□□□□ -0.5
CHD4-213ENST00000545584 BCE1O60756 84 aa11.91□□□□□ -0.5
CHD4-213ENST00000545584 HBDP02042 147 aa11.91□□□□□ -0.5
CHD4-213ENST00000545584 NKAPP1Q8N9T2 125 aa11.91□□□□□ -0.5
CHD4-213ENST00000545584 C18orf32Q8TCD1 76 aa11.91□□□□□ -0.5
CHD4-213ENST00000545584 LINC00167Q96N53 147 aa11.91□□□□□ -0.5
CHD4-213ENST00000545584 RPL37AP8A6NKH3 93 aa11.9□□□□□ -0.5
CHD4-213ENST00000545584 SNAPINO95295 136 aa11.9□□□□□ -0.5
CHD4-213ENST00000545584 NDUFA5Q16718 116 aa11.9□□□□□ -0.5
CHD4-213ENST00000545584 SVBPQ8N300 66 aa11.9□□□□□ -0.5
CHD4-213ENST00000545584 A0A096LNJ9 63 aa11.89□□□□□ -0.51
CHD4-213ENST00000545584 IGLV5-37A0A075B6J1 123 aa11.88□□□□□ -0.51
CHD4-213ENST00000545584 GAGE10A6NGK3 116 aa11.88□□□□□ -0.51
CHD4-213ENST00000545584 URB1-AS1Q96HZ7 61 aa11.88□□□□□ -0.51
CHD4-213ENST00000545584 IGLV5-39A0A0G2JS06 123 aa11.87□□□□□ -0.51
CHD4-213ENST00000545584 ZNF22P17026 224 aaPredicted RBP11.87□□□□□ -0.51
CHD4-213ENST00000545584 PFN2P35080 140 aa11.87□□□□□ -0.51
CHD4-213ENST00000545584 PMCHL1Q16048 86 aa11.86□□□□□ -0.51
CHD4-213ENST00000545584 BAGE3Q86Y29 109 aa11.85□□□□□ -0.51
CHD4-213ENST00000545584 ERG28Q9UKR5 140 aa11.84□□□□□ -0.51
CHD4-213ENST00000545584 UBE2AP49459 152 aa11.83□□□□□ -0.52
CHD4-213ENST00000545584 TMEM170BQ5T4T1 132 aa11.83□□□□□ -0.52
CHD4-213ENST00000545584 SFTA2Q6UW10 78 aa11.83□□□□□ -0.52
CHD4-213ENST00000545584 COX17Q14061 63 aa11.82□□□□□ -0.52
CHD4-213ENST00000545584 C11orf86A6NJI1 115 aa11.81□□□□□ -0.52
CHD4-213ENST00000545584 RPL24P83731 157 aaKnown RBP11.81□□□□□ -0.52
CHD4-213ENST00000545584 YPEL4Q96NS1 127 aa11.81□□□□□ -0.52
CHD4-213ENST00000545584 CRYGAP11844 174 aa11.8□□□□□ -0.52
CHD4-213ENST00000545584 ZNF625Q96I27 306 aaPredicted RBP11.8□□□□□ -0.52
CHD4-213ENST00000545584 SND1-IT1Q9HBX3 110 aa11.8□□□□□ -0.52
CHD4-213ENST00000545584 IGKV2-28A0A075B6P5 120 aa11.79□□□□□ -0.52
CHD4-213ENST00000545584 IGKV2D-28P01615 120 aa11.79□□□□□ -0.52
CHD4-213ENST00000545584 PRR4Q16378 134 aa11.79□□□□□ -0.52
CHD4-213ENST00000545584 CHTOPQ9Y3Y2 248 aaKnown RBP11.79□□□□□ -0.52
CHD4-213ENST00000545584 SCO1O75880 301 aa11.78□□□□□ -0.52
CHD4-213ENST00000545584 A0A087X002 238 aa11.77□□□□□ -0.53
CHD4-213ENST00000545584 VPREB1P12018 145 aa11.77□□□□□ -0.53
CHD4-213ENST00000545584 TYMSOSQ8TAI1 123 aa11.77□□□□□ -0.53
CHD4-213ENST00000545584 CHCHD1Q96BP2 118 aaKnown RBP11.77□□□□□ -0.53
CHD4-213ENST00000545584 KRTAP13-1Q8IUC0 172 aa11.76□□□□□ -0.53
CHD4-213ENST00000545584 TSPAN13O95857 204 aa11.75□□□□□ -0.53
CHD4-213ENST00000545584 CBLN2Q8IUK8 224 aa11.74□□□□□ -0.53
CHD4-213ENST00000545584 IFI27L1Q96BM0 104 aa11.74□□□□□ -0.53
CHD4-213ENST00000545584 TRAV12-1A0A0B4J245 112 aa11.73□□□□□ -0.53
CHD4-213ENST00000545584 LINC00158P58513 81 aa11.73□□□□□ -0.53
CHD4-213ENST00000545584 FAM19A1Q7Z5A9 133 aa11.73□□□□□ -0.53
CHD4-213ENST00000545584 TMEM126AQ9H061 195 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms