RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 MT-ATP8P03928 68 aa11.74□□□□□ -0.53
PTPRO-209ENST00000543886 XGP55808 180 aa11.74□□□□□ -0.53
PTPRO-209ENST00000543886 COL6A5A8TX70 2615 aa11.73□□□□□ -0.53
PTPRO-209ENST00000543886 TRBV30A0A0K0K1B3 111 aa11.72□□□□□ -0.53
PTPRO-209ENST00000543886 RPL13AP40429 203 aaKnown RBP11.72□□□□□ -0.53
PTPRO-209ENST00000543886 REG3AQ06141 175 aa11.72□□□□□ -0.53
PTPRO-209ENST00000543886 Q8N3U1 123 aa11.72□□□□□ -0.53
PTPRO-209ENST00000543886 C11orf68Q9H3H3 251 aaKnown RBP11.72□□□□□ -0.53
PTPRO-209ENST00000543886 C9JAW5 83 aa11.72□□□□□ -0.53
PTPRO-209ENST00000543886 SOSTDC1Q6X4U4 206 aa11.72□□□□□ -0.53
PTPRO-209ENST00000543886 TRIAP1O43715 76 aa11.71□□□□□ -0.53
PTPRO-209ENST00000543886 C6orf226Q5I0X4 101 aa11.71□□□□□ -0.53
PTPRO-209ENST00000543886 LINC01561Q8N1V8 128 aa11.71□□□□□ -0.53
PTPRO-209ENST00000543886 ATXN8Q156A1 80 aa11.71□□□□□ -0.54
PTPRO-209ENST00000543886 CD164L2Q6UWJ8 174 aa11.71□□□□□ -0.54
PTPRO-209ENST00000543886 CHCHD10Q8WYQ3 142 aaPredicted RBP11.71□□□□□ -0.54
PTPRO-209ENST00000543886 PPDPFQ9H3Y8 114 aa11.71□□□□□ -0.54
PTPRO-209ENST00000543886 COX7A2LO14548 114 aa11.69□□□□□ -0.54
PTPRO-209ENST00000543886 LINC00158P58513 81 aa11.69□□□□□ -0.54
PTPRO-209ENST00000543886 IGLV10-54A0A075B6I4 117 aa11.69□□□□□ -0.54
PTPRO-209ENST00000543886 IBA57-AS1B1ANH7 110 aa11.69□□□□□ -0.54
PTPRO-209ENST00000543886 H3BNG1 76 aa11.69□□□□□ -0.54
PTPRO-209ENST00000543886 COX6CP09669 75 aa11.69□□□□□ -0.54
PTPRO-209ENST00000543886 Q8IZM0 81 aa11.69□□□□□ -0.54
PTPRO-209ENST00000543886 MIR7-3HGQ8N6C7 128 aa11.69□□□□□ -0.54
PTPRO-209ENST00000543886 LYPD5Q6UWN5 251 aa11.68□□□□□ -0.54
PTPRO-209ENST00000543886 Q6ZTC4 211 aa11.68□□□□□ -0.54
PTPRO-209ENST00000543886 CMYA5Q8N3K9 4069 aa11.67□□□□□ -0.54
PTPRO-209ENST00000543886 KPRPQ5T749 579 aaPredicted RBP11.67□□□□□ -0.54
PTPRO-209ENST00000543886 LINC01600Q96MT4 127 aa11.67□□□□□ -0.54
PTPRO-209ENST00000543886 A0A0J9YWU9 116 aa11.66□□□□□ -0.54
PTPRO-209ENST00000543886 MALP21145 153 aa11.66□□□□□ -0.54
PTPRO-209ENST00000543886 LINC01620Q4KN68 170 aa11.66□□□□□ -0.54
PTPRO-209ENST00000543886 PFN2P35080 140 aa11.66□□□□□ -0.54
PTPRO-209ENST00000543886 CFAP161Q6P656 301 aa11.64□□□□□ -0.55
PTPRO-209ENST00000543886 KLK12Q9UKR0 248 aa11.64□□□□□ -0.55
PTPRO-209ENST00000543886 TRBV10-2A0A0K0K1G8 114 aa11.63□□□□□ -0.55
PTPRO-209ENST00000543886 C11orf45Q8TAV5 145 aa11.63□□□□□ -0.55
PTPRO-209ENST00000543886 SND1-IT1Q9HBX3 110 aa11.63□□□□□ -0.55
PTPRO-209ENST00000543886 NANOS2P60321 138 aaKnown RBP11.63□□□□□ -0.55
PTPRO-209ENST00000543886 NTN5Q8WTR8 489 aaPredicted RBP11.63□□□□□ -0.55
PTPRO-209ENST00000543886 ANK2Q01484 3957 aa11.62□□□□□ -0.55
PTPRO-209ENST00000543886 CXCL5P42830 114 aa11.62□□□□□ -0.55
PTPRO-209ENST00000543886 C2orf82Q6UX34 121 aa11.62□□□□□ -0.55
PTPRO-209ENST00000543886 PRR34Q9NV39 138 aa11.62□□□□□ -0.55
PTPRO-209ENST00000543886 ANAPC13Q9BS18 74 aa11.61□□□□□ -0.55
PTPRO-209ENST00000543886 TRAV13-2A0A0B4J235 113 aa11.61□□□□□ -0.55
PTPRO-209ENST00000543886 SNCGO76070 127 aa11.61□□□□□ -0.55
PTPRO-209ENST00000543886 CRPP02741 224 aa11.61□□□□□ -0.55
PTPRO-209ENST00000543886 DEFB131BA0A096LNP1 70 aa11.6□□□□□ -0.55
PTPRO-209ENST00000543886 CCL18P55774 89 aa11.6□□□□□ -0.55
PTPRO-209ENST00000543886 PRB2P02812 416 aaPredicted RBP11.59□□□□□ -0.55
PTPRO-209ENST00000543886 KIAA0087Q14695 138 aa11.59□□□□□ -0.55
PTPRO-209ENST00000543886 CLEC2BQ92478 149 aa11.59□□□□□ -0.55
PTPRO-209ENST00000543886 UBE2WQ96B02 151 aa11.59□□□□□ -0.55
PTPRO-209ENST00000543886 NOTCH1P46531 2555 aa11.58□□□□□ -0.56
PTPRO-209ENST00000543886 TRAV8-4A0A0B4J246 113 aa11.58□□□□□ -0.56
PTPRO-209ENST00000543886 H3BT86 120 aa11.58□□□□□ -0.56
PTPRO-209ENST00000543886 ENHOQ6UWT2 76 aa11.58□□□□□ -0.56
PTPRO-209ENST00000543886 WFDC10BQ8IUB3 73 aa11.58□□□□□ -0.56
PTPRO-209ENST00000543886 GAGE2BQ13066 116 aa11.58□□□□□ -0.56
PTPRO-209ENST00000543886 GAGE2EQ4V326 116 aa11.58□□□□□ -0.56
PTPRO-209ENST00000543886 GAGE2DQ9UEU5 116 aa11.58□□□□□ -0.56
PTPRO-209ENST00000543886 LST1O00453 97 aa11.57□□□□□ -0.56
PTPRO-209ENST00000543886 KLK5Q9Y337 293 aaPredicted RBP11.56□□□□□ -0.56
PTPRO-209ENST00000543886 DNAH3Q8TD57 4116 aa11.56□□□□□ -0.56
PTPRO-209ENST00000543886 IGKV2-28A0A075B6P5 120 aa11.56□□□□□ -0.56
PTPRO-209ENST00000543886 IGKV2D-28P01615 120 aa11.56□□□□□ -0.56
PTPRO-209ENST00000543886 Q6Q795 121 aa11.56□□□□□ -0.56
PTPRO-209ENST00000543886 TEX49A0A1B0GTD5 131 aa11.55□□□□□ -0.56
PTPRO-209ENST00000543886 SPAG11BQ08648 103 aa11.55□□□□□ -0.56
PTPRO-209ENST00000543886 COX17Q14061 63 aa11.55□□□□□ -0.56
PTPRO-209ENST00000543886 LINC00337Q8N6G1 96 aa11.55□□□□□ -0.56
PTPRO-209ENST00000543886 ESRGQ1W209 222 aa11.55□□□□□ -0.56
PTPRO-209ENST00000543886 DEFB121Q5J5C9 76 aa11.55□□□□□ -0.56
PTPRO-209ENST00000543886 NBEAL1Q6ZS30 2694 aa11.55□□□□□ -0.56
PTPRO-209ENST00000543886 K7EIL1 84 aa11.54□□□□□ -0.56
PTPRO-209ENST00000543886 TM2D3Q9BRN9 247 aa11.53□□□□□ -0.56
PTPRO-209ENST00000543886 MRAPQ8TCY5 172 aa11.53□□□□□ -0.56
PTPRO-209ENST00000543886 RPL28P46779 137 aaKnown RBP11.51□□□□□ -0.57
PTPRO-209ENST00000543886 NDUFV3P56181 108 aaKnown RBP11.51□□□□□ -0.57
PTPRO-209ENST00000543886 TTC32Q5I0X7 151 aa11.51□□□□□ -0.57
PTPRO-209ENST00000543886 TRAV10A0A0B4J240 114 aa11.5□□□□□ -0.57
PTPRO-209ENST00000543886 FAM240AA0A1B0GVK7 77 aa11.5□□□□□ -0.57
PTPRO-209ENST00000543886 C6orf223Q8N319 242 aa11.5□□□□□ -0.57
PTPRO-209ENST00000543886 C9orf116Q5BN46 136 aaPredicted RBP11.5□□□□□ -0.57
PTPRO-209ENST00000543886 C15orf53Q8NAA6 179 aa11.5□□□□□ -0.57
PTPRO-209ENST00000543886 OR13C6PQ8NH95 151 aa11.49□□□□□ -0.57
PTPRO-209ENST00000543886 TENM3Q9P273 2699 aa11.49□□□□□ -0.57
PTPRO-209ENST00000543886 UNQ6190/PRO20217Q6UXQ8 127 aa11.48□□□□□ -0.57
PTPRO-209ENST00000543886 SMIM11BQ8TCY0 68 aa11.48□□□□□ -0.57
PTPRO-209ENST00000543886 LINC00526Q96FQ7 95 aa11.48□□□□□ -0.57
PTPRO-209ENST00000543886 LINC01556Q5JQF7 62 aa11.48□□□□□ -0.57
PTPRO-209ENST00000543886 NHLRC4P0CG21 123 aaPredicted RBP11.47□□□□□ -0.57
PTPRO-209ENST00000543886 C10orf25Q5T742 122 aa11.47□□□□□ -0.57
PTPRO-209ENST00000543886 MGAM2Q2M2H8 2515 aa11.47□□□□□ -0.57
PTPRO-209ENST00000543886 TRACP01848 142 aa11.46□□□□□ -0.57
PTPRO-209ENST00000543886 MUC7Q8TAX7 377 aa11.46□□□□□ -0.57
PTPRO-209ENST00000543886 NDUFC2O95298 119 aa11.45□□□□□ -0.58
PTPRO-209ENST00000543886 C1orf43Q9BWL3 253 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms