RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ODF3L2Q3SX64 289 aa13.9□□□□□ -0.19
SUDS3-204ENST00000543473 ZNF73O43830 326 aaPredicted RBP13.89□□□□□ -0.19
SUDS3-204ENST00000543473 BRI3O95415 125 aa13.89□□□□□ -0.19
SUDS3-204ENST00000543473 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.89□□□□□ -0.19
SUDS3-204ENST00000543473 SBSPONQ8IVN8 264 aa13.89□□□□□ -0.19
SUDS3-204ENST00000543473 PRR3P79522 188 aaKnown RBP13.89□□□□□ -0.19
SUDS3-204ENST00000543473 PTPRBP23467 1997 aa13.88□□□□□ -0.19
SUDS3-204ENST00000543473 IGLV4-60A0A075B6I1 120 aa13.88□□□□□ -0.19
SUDS3-204ENST00000543473 LINC00482Q8N8I6 264 aa13.87□□□□□ -0.19
SUDS3-204ENST00000543473 M0R378 163 aa13.86□□□□□ -0.19
SUDS3-204ENST00000543473 IGKV2-28A0A075B6P5 120 aa13.85□□□□□ -0.19
SUDS3-204ENST00000543473 IGKV2D-28P01615 120 aa13.85□□□□□ -0.19
SUDS3-204ENST00000543473 FAM19A1Q7Z5A9 133 aa13.85□□□□□ -0.19
SUDS3-204ENST00000543473 ANKRD17O75179 2603 aaKnown RBP13.85□□□□□ -0.19
SUDS3-204ENST00000543473 IGKV2-24A0A0C4DH68 120 aa13.85□□□□□ -0.19
SUDS3-204ENST00000543473 SYCNQ0VAF6 134 aa13.85□□□□□ -0.19
SUDS3-204ENST00000543473 PRR4Q16378 134 aa13.85□□□□□ -0.19
SUDS3-204ENST00000543473 LINC00337Q8N6G1 96 aa13.85□□□□□ -0.19
SUDS3-204ENST00000543473 BEAN1Q3B7T3 259 aa13.85□□□□□ -0.19
SUDS3-204ENST00000543473 CYSRT1A8MQ03 144 aa13.84□□□□□ -0.19
SUDS3-204ENST00000543473 MUC7Q8TAX7 377 aa13.84□□□□□ -0.19
SUDS3-204ENST00000543473 C9orf116Q5BN46 136 aaPredicted RBP13.84□□□□□ -0.19
SUDS3-204ENST00000543473 WFDC10BQ8IUB3 73 aa13.83□□□□□ -0.2
SUDS3-204ENST00000543473 UNQ6190/PRO20217Q6UXQ8 127 aa13.83□□□□□ -0.2
SUDS3-204ENST00000543473 C1orf195Q5TG92 126 aa13.83□□□□□ -0.2
SUDS3-204ENST00000543473 Q8N3U1 123 aa13.83□□□□□ -0.2
SUDS3-204ENST00000543473 MRPL55Q7Z7F7 128 aaKnown RBP13.82□□□□□ -0.2
SUDS3-204ENST00000543473 FLNBO75369 2602 aaKnown RBP13.81□□□□□ -0.2
SUDS3-204ENST00000543473 Q8N2B8 174 aa13.81□□□□□ -0.2
SUDS3-204ENST00000543473 A0A096LNI7 61 aa13.81□□□□□ -0.2
SUDS3-204ENST00000543473 LELP1Q5T871 98 aa13.8□□□□□ -0.2
SUDS3-204ENST00000543473 TRANK1O15050 2925 aa13.8□□□□□ -0.2
SUDS3-204ENST00000543473 IGLV5-39A0A0G2JS06 123 aa13.8□□□□□ -0.2
SUDS3-204ENST00000543473 SOSTDC1Q6X4U4 206 aa13.8□□□□□ -0.2
SUDS3-204ENST00000543473 CELA1Q9UNI1 258 aa13.79□□□□□ -0.2
SUDS3-204ENST00000543473 IGKV4-1P06312 121 aa13.79□□□□□ -0.2
SUDS3-204ENST00000543473 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.79□□□□□ -0.2
SUDS3-204ENST00000543473 WFDC13Q8IUB5 93 aa13.78□□□□□ -0.2
SUDS3-204ENST00000543473 TRBV10-3A0A0K0K1G6 114 aa13.78□□□□□ -0.2
SUDS3-204ENST00000543473 CRYGAP11844 174 aa13.78□□□□□ -0.2
SUDS3-204ENST00000543473 FAM30AQ9NZY2 134 aa13.77□□□□□ -0.2
SUDS3-204ENST00000543473 DHRS4-AS1Q9P1J3 65 aa13.77□□□□□ -0.21
SUDS3-204ENST00000543473 FAM19A4Q96LR4 140 aa13.77□□□□□ -0.21
SUDS3-204ENST00000543473 PCSK5Q92824 1860 aa13.77□□□□□ -0.21
SUDS3-204ENST00000543473 C11orf45Q8TAV5 145 aa13.76□□□□□ -0.21
SUDS3-204ENST00000543473 B9D2Q9BPU9 175 aa13.75□□□□□ -0.21
SUDS3-204ENST00000543473 A0A0C4DFX4 3053 aa13.73□□□□□ -0.21
SUDS3-204ENST00000543473 Q6ZVQ6 151 aa13.73□□□□□ -0.21
SUDS3-204ENST00000543473 DEFB131BA0A096LNP1 70 aa13.73□□□□□ -0.21
SUDS3-204ENST00000543473 FHL2Q14192 279 aa13.73□□□□□ -0.21
SUDS3-204ENST00000543473 LRCOL1A6NCL2 159 aa13.72□□□□□ -0.21
SUDS3-204ENST00000543473 PRUNE2Q8WUY3 3088 aa13.72□□□□□ -0.21
SUDS3-204ENST00000543473 LAMA2P24043 3122 aaKnown RBP13.71□□□□□ -0.22
SUDS3-204ENST00000543473 PRYO14603 147 aa13.7□□□□□ -0.22
SUDS3-204ENST00000543473 FAM218AQ96MZ4 157 aa13.7□□□□□ -0.22
SUDS3-204ENST00000543473 LINC01547P58512 204 aaPredicted RBP13.69□□□□□ -0.22
SUDS3-204ENST00000543473 RPL37AP8A6NKH3 93 aa13.69□□□□□ -0.22
SUDS3-204ENST00000543473 LINC00575Q6W349 94 aa13.69□□□□□ -0.22
SUDS3-204ENST00000543473 KPRPQ5T749 579 aaPredicted RBP13.68□□□□□ -0.22
SUDS3-204ENST00000543473 TMEM254Q8TBM7 123 aa13.68□□□□□ -0.22
SUDS3-204ENST00000543473 A6NED7 52 aa13.68□□□□□ -0.22
SUDS3-204ENST00000543473 A8MTW9 85 aa13.68□□□□□ -0.22
SUDS3-204ENST00000543473 IGLV5-45A0A087WSX0 123 aa13.67□□□□□ -0.22
SUDS3-204ENST00000543473 RPS28P62857 69 aaKnown RBP13.67□□□□□ -0.22
SUDS3-204ENST00000543473 FHL3Q13643 280 aa13.67□□□□□ -0.22
SUDS3-204ENST00000543473 KIR2DL5BQ8NHK3 375 aa13.67□□□□□ -0.22
SUDS3-204ENST00000543473 C11orf72Q8NBR9 251 aa13.67□□□□□ -0.22
SUDS3-204ENST00000543473 A0A0J9YWU9 116 aa13.66□□□□□ -0.22
SUDS3-204ENST00000543473 EGFEM1PQ0D2K5 195 aa13.66□□□□□ -0.22
SUDS3-204ENST00000543473 A0A1B0GUV1 79 aa13.65□□□□□ -0.22
SUDS3-204ENST00000543473 OXLD1Q5BKU9 147 aa13.65□□□□□ -0.22
SUDS3-204ENST00000543473 Q9UF83 564 aa13.65□□□□□ -0.22
SUDS3-204ENST00000543473 IGHV3OR16-9A0A0B4J2B5 98 aa13.64□□□□□ -0.23
SUDS3-204ENST00000543473 HECTD1Q9ULT8 2610 aa13.64□□□□□ -0.23
SUDS3-204ENST00000543473 C1orf137Q5JT78 98 aa13.63□□□□□ -0.23
SUDS3-204ENST00000543473 IGLV1-51P01701 117 aa13.63□□□□□ -0.23
SUDS3-204ENST00000543473 C6orf223Q8N319 242 aa13.62□□□□□ -0.23
SUDS3-204ENST00000543473 TRBV7-6A0A0J9YX20 115 aa13.62□□□□□ -0.23
SUDS3-204ENST00000543473 C14orf177Q52M58 125 aa13.62□□□□□ -0.23
SUDS3-204ENST00000543473 LITAFQ99732 161 aa13.61□□□□□ -0.23
SUDS3-204ENST00000543473 LINC00208Q96KT6 92 aa13.59□□□□□ -0.23
SUDS3-204ENST00000543473 CXCL6P80162 114 aa13.59□□□□□ -0.23
SUDS3-204ENST00000543473 UNC80Q8N2C7 3258 aa13.58□□□□□ -0.23
SUDS3-204ENST00000543473 PRO0628Q9UI54 55 aa13.58□□□□□ -0.24
SUDS3-204ENST00000543473 LINC01561Q8N1V8 128 aa13.58□□□□□ -0.24
SUDS3-204ENST00000543473 C4orf26Q17RF5 130 aa13.57□□□□□ -0.24
SUDS3-204ENST00000543473 NHLRC4P0CG21 123 aaPredicted RBP13.57□□□□□ -0.24
SUDS3-204ENST00000543473 C16orf95Q9H693 158 aa13.57□□□□□ -0.24
SUDS3-204ENST00000543473 NANOS2P60321 138 aaKnown RBP13.56□□□□□ -0.24
SUDS3-204ENST00000543473 IGHV4-30-4P0DP06 118 aa13.56□□□□□ -0.24
SUDS3-204ENST00000543473 PMAIP1Q13794 54 aa13.56□□□□□ -0.24
SUDS3-204ENST00000543473 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.56□□□□□ -0.24
SUDS3-204ENST00000543473 F8P00451 2351 aa13.55□□□□□ -0.24
SUDS3-204ENST00000543473 PSPHP1O15172 72 aa13.54□□□□□ -0.24
SUDS3-204ENST00000543473 MUC4Q99102 2169 aa13.54□□□□□ -0.24
SUDS3-204ENST00000543473 Q8N9L7 120 aa13.53□□□□□ -0.24
SUDS3-204ENST00000543473 ESRGQ1W209 222 aa13.53□□□□□ -0.24
SUDS3-204ENST00000543473 BPTFQ12830 3046 aa13.53□□□□□ -0.24
SUDS3-204ENST00000543473 SEC61GP60059 68 aa13.52□□□□□ -0.24
SUDS3-204ENST00000543473 SMCR5Q8TEV8 140 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms