RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 TRAV13-2A0A0B4J235 113 aa10.78□□□□□ -0.68
CNOT9-208ENST00000542068 CCL18P55774 89 aa10.78□□□□□ -0.68
CNOT9-208ENST00000542068 PRR3P79522 188 aaKnown RBP10.78□□□□□ -0.68
CNOT9-208ENST00000542068 F8P00451 2351 aa10.78□□□□□ -0.68
CNOT9-208ENST00000542068 TRBV10-1A0A0K0K1A3 114 aa10.78□□□□□ -0.68
CNOT9-208ENST00000542068 TMEM86BQ8N661 226 aa10.78□□□□□ -0.68
CNOT9-208ENST00000542068 TRAV25A0A0B4J276 109 aa10.77□□□□□ -0.68
CNOT9-208ENST00000542068 J3QKU1 62 aa10.77□□□□□ -0.68
CNOT9-208ENST00000542068 ACYP1P07311 99 aa10.77□□□□□ -0.68
CNOT9-208ENST00000542068 C6orf226Q5I0X4 101 aa10.77□□□□□ -0.69
CNOT9-208ENST00000542068 A0A087WVE0 104 aa10.76□□□□□ -0.69
CNOT9-208ENST00000542068 PDZD2O15018 2839 aa10.75□□□□□ -0.69
CNOT9-208ENST00000542068 C16orf74Q96GX8 76 aa10.75□□□□□ -0.69
CNOT9-208ENST00000542068 GIG44P09565 113 aaPredicted RBP10.75□□□□□ -0.69
CNOT9-208ENST00000542068 INAFM2P0DMQ5 153 aa10.75□□□□□ -0.69
CNOT9-208ENST00000542068 CSDC2Q9Y534 153 aaKnown RBP10.74□□□□□ -0.69
CNOT9-208ENST00000542068 IGLV10-54A0A075B6I4 117 aa10.74□□□□□ -0.69
CNOT9-208ENST00000542068 GYPEP15421 78 aa10.73□□□□□ -0.69
CNOT9-208ENST00000542068 RPL28P46779 137 aaKnown RBP10.73□□□□□ -0.69
CNOT9-208ENST00000542068 DEFB135Q30KP9 77 aa10.73□□□□□ -0.69
CNOT9-208ENST00000542068 MAST4O15021 2626 aa10.73□□□□□ -0.69
CNOT9-208ENST00000542068 IGLV1-51P01701 117 aa10.72□□□□□ -0.69
CNOT9-208ENST00000542068 NOTCH1P46531 2555 aa10.72□□□□□ -0.69
CNOT9-208ENST00000542068 TRBV6-8A0A0A6YYG3 113 aa10.71□□□□□ -0.69
CNOT9-208ENST00000542068 LOC107984640A0A0U1RRK4 108 aa10.71□□□□□ -0.69
CNOT9-208ENST00000542068 C3orf22Q8N5N4 141 aa10.71□□□□□ -0.69
CNOT9-208ENST00000542068 IL17DQ8TAD2 202 aa10.71□□□□□ -0.69
CNOT9-208ENST00000542068 PPDPFQ9H3Y8 114 aa10.71□□□□□ -0.69
CNOT9-208ENST00000542068 LINC00846Q9NV44 126 aa10.71□□□□□ -0.69
CNOT9-208ENST00000542068 INAFM1C9JVW0 142 aa10.71□□□□□ -0.7
CNOT9-208ENST00000542068 HIST1H4AP62805 103 aaKnown RBP10.71□□□□□ -0.7
CNOT9-208ENST00000542068 SPATA3Q8NHX4 192 aa10.71□□□□□ -0.7
CNOT9-208ENST00000542068 HIVEP1P15822 2718 aa10.71□□□□□ -0.7
CNOT9-208ENST00000542068 WFDC9Q8NEX5 89 aa10.7□□□□□ -0.7
CNOT9-208ENST00000542068 NSD1Q96L73 2696 aaPredicted RBP10.7□□□□□ -0.7
CNOT9-208ENST00000542068 STAB1Q9NY15 2570 aa10.7□□□□□ -0.7
CNOT9-208ENST00000542068 IGHV3OR16-9A0A0B4J2B5 98 aa10.69□□□□□ -0.7
CNOT9-208ENST00000542068 hADV29S1A0JD25 119 aa10.69□□□□□ -0.7
CNOT9-208ENST00000542068 PLAC8L1A1L4L8 177 aa10.69□□□□□ -0.7
CNOT9-208ENST00000542068 KRTAP1-1Q07627 177 aa10.69□□□□□ -0.7
CNOT9-208ENST00000542068 IMUPQ9GZP8 106 aa10.68□□□□□ -0.7
CNOT9-208ENST00000542068 A0A1B0GX51 115 aa10.68□□□□□ -0.7
CNOT9-208ENST00000542068 FAM110AQ9BQ89 295 aa10.68□□□□□ -0.7
CNOT9-208ENST00000542068 HILS1P60008 231 aa10.67□□□□□ -0.7
CNOT9-208ENST00000542068 FHL2Q14192 279 aa10.67□□□□□ -0.7
CNOT9-208ENST00000542068 C9orf116Q5BN46 136 aaPredicted RBP10.67□□□□□ -0.7
CNOT9-208ENST00000542068 Q8N3U1 123 aa10.67□□□□□ -0.7
CNOT9-208ENST00000542068 LINC00959A0A1B0GUT2 108 aa10.67□□□□□ -0.7
CNOT9-208ENST00000542068 LY6G6DO95868 133 aa10.67□□□□□ -0.7
CNOT9-208ENST00000542068 CXCL5P42830 114 aa10.67□□□□□ -0.7
CNOT9-208ENST00000542068 FAM19A3Q7Z5A8 133 aa10.67□□□□□ -0.7
CNOT9-208ENST00000542068 FAM222AQ5U5X8 452 aa10.66□□□□□ -0.7
CNOT9-208ENST00000542068 CMC4P56277 68 aaPredicted RBP10.66□□□□□ -0.7
CNOT9-208ENST00000542068 TRBV6-4A0A1B0GX49 114 aa10.66□□□□□ -0.7
CNOT9-208ENST00000542068 UQCRQO14949 82 aa10.66□□□□□ -0.7
CNOT9-208ENST00000542068 LINC00526Q96FQ7 95 aa10.66□□□□□ -0.7
CNOT9-208ENST00000542068 C19orf73Q9NVV2 129 aa10.65□□□□□ -0.7
CNOT9-208ENST00000542068 KRTAP10-3P60369 221 aa10.64□□□□□ -0.71
CNOT9-208ENST00000542068 CFAP161Q6P656 301 aa10.64□□□□□ -0.71
CNOT9-208ENST00000542068 TMEM126AQ9H061 195 aa10.64□□□□□ -0.71
CNOT9-208ENST00000542068 CYSTM1Q9H1C7 97 aa10.64□□□□□ -0.71
CNOT9-208ENST00000542068 A0A087WZ39 114 aa10.64□□□□□ -0.71
CNOT9-208ENST00000542068 IBA57-AS1B1ANH7 110 aa10.64□□□□□ -0.71
CNOT9-208ENST00000542068 H0YGX0 51 aa10.64□□□□□ -0.71
CNOT9-208ENST00000542068 ANGP03950 147 aaKnown RBP10.63□□□□□ -0.71
CNOT9-208ENST00000542068 TRRAPQ9Y4A5 3859 aa10.63□□□□□ -0.71
CNOT9-208ENST00000542068 ORMDL1Q9P0S3 153 aa10.62□□□□□ -0.71
CNOT9-208ENST00000542068 COX7CP15954 63 aa10.62□□□□□ -0.71
CNOT9-208ENST00000542068 SS18Q15532 418 aa10.62□□□□□ -0.71
CNOT9-208ENST00000542068 NBEAL1Q6ZS30 2694 aa10.62□□□□□ -0.71
CNOT9-208ENST00000542068 LINC00269Q8N2A0 174 aa10.61□□□□□ -0.71
CNOT9-208ENST00000542068 CSNK1G2-AS1Q8NCQ2 148 aa10.61□□□□□ -0.71
CNOT9-208ENST00000542068 OVOL2Q9BRP0 275 aa10.61□□□□□ -0.71
CNOT9-208ENST00000542068 DAD1P61803 113 aa10.6□□□□□ -0.71
CNOT9-208ENST00000542068 C16orf95Q9H693 158 aa10.59□□□□□ -0.71
CNOT9-208ENST00000542068 ATOX1O00244 68 aa10.59□□□□□ -0.71
CNOT9-208ENST00000542068 TRAV23DV6A0A075B6W5 121 aa10.58□□□□□ -0.72
CNOT9-208ENST00000542068 RPL18AQ02543 176 aaKnown RBP10.58□□□□□ -0.72
CNOT9-208ENST00000542068 C2orf48Q96LS8 159 aa10.57□□□□□ -0.72
CNOT9-208ENST00000542068 USP17L23D6RBM5 183 aa10.57□□□□□ -0.72
CNOT9-208ENST00000542068 LINC01561Q8N1V8 128 aa10.57□□□□□ -0.72
CNOT9-208ENST00000542068 KIR2DL5BQ8NHK3 375 aa10.57□□□□□ -0.72
CNOT9-208ENST00000542068 PRO0255Q9UI72 69 aa10.57□□□□□ -0.72
CNOT9-208ENST00000542068 C6orf99Q4VX62 202 aa10.56□□□□□ -0.72
CNOT9-208ENST00000542068 FAM19A1Q7Z5A9 133 aa10.56□□□□□ -0.72
CNOT9-208ENST00000542068 S100A7L2Q5SY68 101 aa10.55□□□□□ -0.72
CNOT9-208ENST00000542068 ENHOQ6UWT2 76 aa10.55□□□□□ -0.72
CNOT9-208ENST00000542068 COL6A5A8TX70 2615 aa10.55□□□□□ -0.72
CNOT9-208ENST00000542068 C6orf223Q8N319 242 aa10.55□□□□□ -0.72
CNOT9-208ENST00000542068 IGHV4-28A0A0C4DH34 117 aa10.53□□□□□ -0.72
CNOT9-208ENST00000542068 DSCR8Q96T75 97 aa10.53□□□□□ -0.72
CNOT9-208ENST00000542068 PKD1L1Q8TDX9 2849 aa10.53□□□□□ -0.72
CNOT9-208ENST00000542068 Q6JHZ5 121 aa10.53□□□□□ -0.72
CNOT9-208ENST00000542068 CHCHD10Q8WYQ3 142 aaPredicted RBP10.53□□□□□ -0.72
CNOT9-208ENST00000542068 ANK3Q12955 4377 aaKnown RBP10.53□□□□□ -0.72
CNOT9-208ENST00000542068 NANOS2P60321 138 aaKnown RBP10.53□□□□□ -0.72
CNOT9-208ENST00000542068 Q8N814 137 aa10.53□□□□□ -0.72
CNOT9-208ENST00000542068 Q8NDZ9 215 aa10.53□□□□□ -0.72
CNOT9-208ENST00000542068 X6R8D5 127 aa10.53□□□□□ -0.72
CNOT9-208ENST00000542068 FBN1P35555 2871 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 974.3 ms