RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 UBE2WQ96B02 151 aa11.91□□□□□ -0.5
EPB41L3-204ENST00000540638 SPART-AS1P0CW21 52 aa11.91□□□□□ -0.5
EPB41L3-204ENST00000540638 HERV-K104P63124 156 aa11.91□□□□□ -0.5
EPB41L3-204ENST00000540638 MT-ATP8P03928 68 aa11.9□□□□□ -0.5
EPB41L3-204ENST00000540638 KIR2DL5BQ8NHK3 375 aa11.9□□□□□ -0.5
EPB41L3-204ENST00000540638 C9orf116Q5BN46 136 aaPredicted RBP11.9□□□□□ -0.51
EPB41L3-204ENST00000540638 DNAL4O96015 105 aa11.89□□□□□ -0.51
EPB41L3-204ENST00000540638 PRR3P79522 188 aaKnown RBP11.89□□□□□ -0.51
EPB41L3-204ENST00000540638 FBN1P35555 2871 aaKnown RBP11.89□□□□□ -0.51
EPB41L3-204ENST00000540638 TRAV8-4A0A0B4J246 113 aa11.88□□□□□ -0.51
EPB41L3-204ENST00000540638 IGHV3OR16-9A0A0B4J2B5 98 aa11.88□□□□□ -0.51
EPB41L3-204ENST00000540638 TRBV10-2A0A0K0K1G8 114 aa11.88□□□□□ -0.51
EPB41L3-204ENST00000540638 REG3AQ06141 175 aa11.88□□□□□ -0.51
EPB41L3-204ENST00000540638 H7C423 109 aa11.87□□□□□ -0.51
EPB41L3-204ENST00000540638 CHCHD10Q8WYQ3 142 aaPredicted RBP11.87□□□□□ -0.51
EPB41L3-204ENST00000540638 SMIM9A6NGZ8 99 aa11.87□□□□□ -0.51
EPB41L3-204ENST00000540638 MRAPQ8TCY5 172 aa11.87□□□□□ -0.51
EPB41L3-204ENST00000540638 LYRM9A8MSI8 78 aa11.86□□□□□ -0.51
EPB41L3-204ENST00000540638 TIMM17BO60830 172 aa11.86□□□□□ -0.51
EPB41L3-204ENST00000540638 COX7A2LO14548 114 aa11.85□□□□□ -0.51
EPB41L3-204ENST00000540638 CCL18P55774 89 aa11.85□□□□□ -0.51
EPB41L3-204ENST00000540638 XGP55808 180 aa11.85□□□□□ -0.51
EPB41L3-204ENST00000540638 MRPL23Q16540 153 aaKnown RBP11.85□□□□□ -0.51
EPB41L3-204ENST00000540638 A0A087WZ39 114 aa11.84□□□□□ -0.51
EPB41L3-204ENST00000540638 SNCGO76070 127 aa11.84□□□□□ -0.51
EPB41L3-204ENST00000540638 TTC32Q5I0X7 151 aa11.83□□□□□ -0.52
EPB41L3-204ENST00000540638 LINC00337Q8N6G1 96 aa11.83□□□□□ -0.52
EPB41L3-204ENST00000540638 LST1O00453 97 aa11.83□□□□□ -0.52
EPB41L3-204ENST00000540638 BAALC-AS2P0C853 105 aa11.82□□□□□ -0.52
EPB41L3-204ENST00000540638 DEFB121Q5J5C9 76 aa11.82□□□□□ -0.52
EPB41L3-204ENST00000540638 TRAV13-2A0A0B4J235 113 aa11.82□□□□□ -0.52
EPB41L3-204ENST00000540638 SLPIP03973 132 aa11.82□□□□□ -0.52
EPB41L3-204ENST00000540638 PKD1L1Q8TDX9 2849 aa11.81□□□□□ -0.52
EPB41L3-204ENST00000540638 CITED1Q99966 193 aa11.81□□□□□ -0.52
EPB41L3-204ENST00000540638 C6orf223Q8N319 242 aa11.81□□□□□ -0.52
EPB41L3-204ENST00000540638 CDIP1Q9H305 208 aa11.8□□□□□ -0.52
EPB41L3-204ENST00000540638 NCR3O14931 201 aa11.8□□□□□ -0.52
EPB41L3-204ENST00000540638 MIFP14174 115 aa11.8□□□□□ -0.52
EPB41L3-204ENST00000540638 SPATA25Q9BR10 227 aa11.79□□□□□ -0.52
EPB41L3-204ENST00000540638 LECT2O14960 151 aa11.79□□□□□ -0.52
EPB41L3-204ENST00000540638 SMIM11BQ8TCY0 68 aa11.79□□□□□ -0.52
EPB41L3-204ENST00000540638 HIGD2BQ4VC39 106 aa11.78□□□□□ -0.52
EPB41L3-204ENST00000540638 C15orf53Q8NAA6 179 aa11.78□□□□□ -0.52
EPB41L3-204ENST00000540638 Q8NAQ8 132 aa11.78□□□□□ -0.52
EPB41L3-204ENST00000540638 S100A7L2Q5SY68 101 aa11.78□□□□□ -0.52
EPB41L3-204ENST00000540638 FAM218AQ96MZ4 157 aa11.78□□□□□ -0.52
EPB41L3-204ENST00000540638 SPAG11BQ08648 103 aa11.77□□□□□ -0.53
EPB41L3-204ENST00000540638 TENM3Q9P273 2699 aa11.77□□□□□ -0.53
EPB41L3-204ENST00000540638 IBA57-AS1B1ANH7 110 aa11.77□□□□□ -0.53
EPB41L3-204ENST00000540638 GAGE2AQ6NT46 116 aa11.77□□□□□ -0.53
EPB41L3-204ENST00000540638 Q6ZTC4 211 aa11.77□□□□□ -0.53
EPB41L3-204ENST00000540638 UNQ6190/PRO20217Q6UXQ8 127 aa11.76□□□□□ -0.53
EPB41L3-204ENST00000540638 XAGE1AQ9HD64 81 aa11.76□□□□□ -0.53
EPB41L3-204ENST00000540638 RNF183Q96D59 192 aa11.75□□□□□ -0.53
EPB41L3-204ENST00000540638 CD164L2Q6UWJ8 174 aa11.75□□□□□ -0.53
EPB41L3-204ENST00000540638 IGKV2-28A0A075B6P5 120 aa11.75□□□□□ -0.53
EPB41L3-204ENST00000540638 H3BT86 120 aa11.75□□□□□ -0.53
EPB41L3-204ENST00000540638 IGKV2D-28P01615 120 aa11.75□□□□□ -0.53
EPB41L3-204ENST00000540638 GAGE2BQ13066 116 aa11.75□□□□□ -0.53
EPB41L3-204ENST00000540638 KRTAP24-1Q3LI83 254 aa11.75□□□□□ -0.53
EPB41L3-204ENST00000540638 GAGE2EQ4V326 116 aa11.75□□□□□ -0.53
EPB41L3-204ENST00000540638 GAGE2DQ9UEU5 116 aa11.75□□□□□ -0.53
EPB41L3-204ENST00000540638 BAHCC1Q9P281 2608 aa11.74□□□□□ -0.53
EPB41L3-204ENST00000540638 NANOS2P60321 138 aaKnown RBP11.74□□□□□ -0.53
EPB41L3-204ENST00000540638 A0A087WYN8 130 aa11.73□□□□□ -0.53
EPB41L3-204ENST00000540638 KPRPQ5T749 579 aaPredicted RBP11.73□□□□□ -0.53
EPB41L3-204ENST00000540638 A0A1B0GUV1 79 aa11.73□□□□□ -0.53
EPB41L3-204ENST00000540638 WFDC10BQ8IUB3 73 aa11.73□□□□□ -0.53
EPB41L3-204ENST00000540638 A0A0J9YWU9 116 aa11.71□□□□□ -0.53
EPB41L3-204ENST00000540638 C10orf25Q5T742 122 aa11.71□□□□□ -0.53
EPB41L3-204ENST00000540638 LINC00612Q8N6U2 182 aa11.71□□□□□ -0.53
EPB41L3-204ENST00000540638 KRTAP10-11P60412 298 aa11.71□□□□□ -0.54
EPB41L3-204ENST00000540638 ZNF561-AS1K7EIQ3 104 aa11.7□□□□□ -0.54
EPB41L3-204ENST00000540638 FAM19A3Q7Z5A8 133 aa11.7□□□□□ -0.54
EPB41L3-204ENST00000540638 IGKV2D-24A0A075B6R9 120 aa11.7□□□□□ -0.54
EPB41L3-204ENST00000540638 RPL18AQ02543 176 aaKnown RBP11.7□□□□□ -0.54
EPB41L3-204ENST00000540638 Q8IZM0 81 aa11.7□□□□□ -0.54
EPB41L3-204ENST00000540638 ANAPC13Q9BS18 74 aa11.69□□□□□ -0.54
EPB41L3-204ENST00000540638 LELP1Q5T871 98 aa11.69□□□□□ -0.54
EPB41L3-204ENST00000540638 SHISA2Q6UWI4 295 aa11.69□□□□□ -0.54
EPB41L3-204ENST00000540638 C14orf132Q9NPU4 83 aa11.69□□□□□ -0.54
EPB41L3-204ENST00000540638 CYSRT1A8MQ03 144 aa11.68□□□□□ -0.54
EPB41L3-204ENST00000540638 LYPD5Q6UWN5 251 aa11.67□□□□□ -0.54
EPB41L3-204ENST00000540638 WFDC9Q8NEX5 89 aa11.67□□□□□ -0.54
EPB41L3-204ENST00000540638 DEFB131BA0A096LNP1 70 aa11.66□□□□□ -0.54
EPB41L3-204ENST00000540638 CAMK2N2Q96S95 79 aa11.65□□□□□ -0.54
EPB41L3-204ENST00000540638 C11orf45Q8TAV5 145 aa11.65□□□□□ -0.54
EPB41L3-204ENST00000540638 C6orf99Q4VX62 202 aa11.64□□□□□ -0.55
EPB41L3-204ENST00000540638 RPL28P46779 137 aaKnown RBP11.64□□□□□ -0.55
EPB41L3-204ENST00000540638 TRACP01848 142 aa11.62□□□□□ -0.55
EPB41L3-204ENST00000540638 C1orf43Q9BWL3 253 aa11.61□□□□□ -0.55
EPB41L3-204ENST00000540638 H0YGX0 51 aa11.61□□□□□ -0.55
EPB41L3-204ENST00000540638 ENHOQ6UWT2 76 aa11.61□□□□□ -0.55
EPB41L3-204ENST00000540638 KIAA0087Q14695 138 aa11.6□□□□□ -0.55
EPB41L3-204ENST00000540638 TMEM126AQ9H061 195 aa11.59□□□□□ -0.55
EPB41L3-204ENST00000540638 CXCL5P42830 114 aa11.59□□□□□ -0.55
EPB41L3-204ENST00000540638 C9orf129Q5T035 196 aaKnown RBP11.59□□□□□ -0.55
EPB41L3-204ENST00000540638 ESRGQ1W209 222 aa11.58□□□□□ -0.56
EPB41L3-204ENST00000540638 ORMDL1Q9P0S3 153 aa11.58□□□□□ -0.56
EPB41L3-204ENST00000540638 LAMTOR3Q9UHA4 124 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms