RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 IGLV10-54A0A075B6I4 117 aa14.07□□□□□ -0.16
SMPDL3A-203ENST00000539041 LINC00158P58513 81 aa14.07□□□□□ -0.16
SMPDL3A-203ENST00000539041 RNF151Q2KHN1 245 aa14.06□□□□□ -0.16
SMPDL3A-203ENST00000539041 SMCPP49901 116 aaPredicted RBP14.05□□□□□ -0.16
SMPDL3A-203ENST00000539041 COX6CP09669 75 aa14.04□□□□□ -0.16
SMPDL3A-203ENST00000539041 C11orf45Q8TAV5 145 aa14.04□□□□□ -0.16
SMPDL3A-203ENST00000539041 PRR34Q9NV39 138 aa14.04□□□□□ -0.16
SMPDL3A-203ENST00000539041 KLK12Q9UKR0 248 aa14.04□□□□□ -0.16
SMPDL3A-203ENST00000539041 NANOS2P60321 138 aaKnown RBP14.04□□□□□ -0.16
SMPDL3A-203ENST00000539041 FOXI1Q12951 378 aa14.04□□□□□ -0.16
SMPDL3A-203ENST00000539041 ATXN8Q156A1 80 aa14.04□□□□□ -0.16
SMPDL3A-203ENST00000539041 ETDBQ3ZM63 59 aa14.04□□□□□ -0.16
SMPDL3A-203ENST00000539041 MALP21145 153 aa14.03□□□□□ -0.16
SMPDL3A-203ENST00000539041 PKD1L1Q8TDX9 2849 aa14.02□□□□□ -0.16
SMPDL3A-203ENST00000539041 CFAP161Q6P656 301 aa14.02□□□□□ -0.16
SMPDL3A-203ENST00000539041 SPATA25Q9BR10 227 aa14.02□□□□□ -0.16
SMPDL3A-203ENST00000539041 PFN2P35080 140 aa14.01□□□□□ -0.17
SMPDL3A-203ENST00000539041 CXCL5P42830 114 aa14.01□□□□□ -0.17
SMPDL3A-203ENST00000539041 KIAA0087Q14695 138 aa14.01□□□□□ -0.17
SMPDL3A-203ENST00000539041 DEFB131BA0A096LNP1 70 aa14.01□□□□□ -0.17
SMPDL3A-203ENST00000539041 GAGE12HA6NDE8 117 aa14.01□□□□□ -0.17
SMPDL3A-203ENST00000539041 CKS1BP61024 79 aa14.01□□□□□ -0.17
SMPDL3A-203ENST00000539041 PRB2P02812 416 aaPredicted RBP14□□□□□ -0.17
SMPDL3A-203ENST00000539041 C2orf82Q6UX34 121 aa14□□□□□ -0.17
SMPDL3A-203ENST00000539041 SND1-IT1Q9HBX3 110 aa14□□□□□ -0.17
SMPDL3A-203ENST00000539041 ENHOQ6UWT2 76 aa13.99□□□□□ -0.17
SMPDL3A-203ENST00000539041 WFDC10BQ8IUB3 73 aa13.99□□□□□ -0.17
SMPDL3A-203ENST00000539041 K7EIL1 84 aa13.99□□□□□ -0.17
SMPDL3A-203ENST00000539041 CCL18P55774 89 aa13.99□□□□□ -0.17
SMPDL3A-203ENST00000539041 C9JAW5 83 aa13.98□□□□□ -0.17
SMPDL3A-203ENST00000539041 CRPP02741 224 aa13.98□□□□□ -0.17
SMPDL3A-203ENST00000539041 LINC01620Q4KN68 170 aa13.98□□□□□ -0.17
SMPDL3A-203ENST00000539041 VPS25Q9BRG1 176 aa13.98□□□□□ -0.17
SMPDL3A-203ENST00000539041 TM2D3Q9BRN9 247 aa13.98□□□□□ -0.17
SMPDL3A-203ENST00000539041 TRAV13-2A0A0B4J235 113 aa13.97□□□□□ -0.17
SMPDL3A-203ENST00000539041 SLC25A20O43772 301 aa13.96□□□□□ -0.17
SMPDL3A-203ENST00000539041 KLK5Q9Y337 293 aaPredicted RBP13.96□□□□□ -0.17
SMPDL3A-203ENST00000539041 CBY1Q9Y3M2 126 aa13.96□□□□□ -0.17
SMPDL3A-203ENST00000539041 TRAV8-4A0A0B4J246 113 aa13.96□□□□□ -0.18
SMPDL3A-203ENST00000539041 ESRGQ1W209 222 aa13.96□□□□□ -0.18
SMPDL3A-203ENST00000539041 J3QR89 54 aa13.95□□□□□ -0.18
SMPDL3A-203ENST00000539041 M0QXV9 152 aa13.95□□□□□ -0.18
SMPDL3A-203ENST00000539041 UBE2WQ96B02 151 aa13.95□□□□□ -0.18
SMPDL3A-203ENST00000539041 CLEC2BQ92478 149 aa13.94□□□□□ -0.18
SMPDL3A-203ENST00000539041 IGKV2-28A0A075B6P5 120 aa13.94□□□□□ -0.18
SMPDL3A-203ENST00000539041 LST1O00453 97 aa13.94□□□□□ -0.18
SMPDL3A-203ENST00000539041 IGKV2D-28P01615 120 aa13.94□□□□□ -0.18
SMPDL3A-203ENST00000539041 COX17Q14061 63 aa13.94□□□□□ -0.18
SMPDL3A-203ENST00000539041 DEFB121Q5J5C9 76 aa13.94□□□□□ -0.18
SMPDL3A-203ENST00000539041 COL6A5A8TX70 2615 aa13.93□□□□□ -0.18
SMPDL3A-203ENST00000539041 TENM3Q9P273 2699 aa13.93□□□□□ -0.18
SMPDL3A-203ENST00000539041 SPAG11BQ08648 103 aa13.93□□□□□ -0.18
SMPDL3A-203ENST00000539041 TEN1Q86WV5 123 aa13.93□□□□□ -0.18
SMPDL3A-203ENST00000539041 LINC00337Q8N6G1 96 aa13.92□□□□□ -0.18
SMPDL3A-203ENST00000539041 TRAV10A0A0B4J240 114 aa13.91□□□□□ -0.18
SMPDL3A-203ENST00000539041 ANK2Q01484 3957 aa13.91□□□□□ -0.18
SMPDL3A-203ENST00000539041 TRBV10-2A0A0K0K1G8 114 aa13.91□□□□□ -0.18
SMPDL3A-203ENST00000539041 MRAPQ8TCY5 172 aa13.91□□□□□ -0.18
SMPDL3A-203ENST00000539041 ANKRD29Q8N6D5 301 aa13.9□□□□□ -0.18
SMPDL3A-203ENST00000539041 LINC01600Q96MT4 127 aa13.9□□□□□ -0.18
SMPDL3A-203ENST00000539041 PPDPFLQ8WWR9 84 aa13.88□□□□□ -0.19
SMPDL3A-203ENST00000539041 RPL28P46779 137 aaKnown RBP13.88□□□□□ -0.19
SMPDL3A-203ENST00000539041 LINC01556Q5JQF7 62 aa13.87□□□□□ -0.19
SMPDL3A-203ENST00000539041 C6orf223Q8N319 242 aa13.87□□□□□ -0.19
SMPDL3A-203ENST00000539041 C15orf53Q8NAA6 179 aa13.87□□□□□ -0.19
SMPDL3A-203ENST00000539041 C9orf116Q5BN46 136 aaPredicted RBP13.86□□□□□ -0.19
SMPDL3A-203ENST00000539041 CARD19Q96LW7 228 aa13.86□□□□□ -0.19
SMPDL3A-203ENST00000539041 H3BT86 120 aa13.85□□□□□ -0.19
SMPDL3A-203ENST00000539041 KRTAP26-1Q6PEX3 210 aa13.85□□□□□ -0.19
SMPDL3A-203ENST00000539041 UNQ6190/PRO20217Q6UXQ8 127 aa13.85□□□□□ -0.19
SMPDL3A-203ENST00000539041 C10orf25Q5T742 122 aa13.84□□□□□ -0.19
SMPDL3A-203ENST00000539041 MUC7Q8TAX7 377 aa13.84□□□□□ -0.19
SMPDL3A-203ENST00000539041 NOTCH1P46531 2555 aa13.84□□□□□ -0.19
SMPDL3A-203ENST00000539041 LINC00526Q96FQ7 95 aa13.83□□□□□ -0.19
SMPDL3A-203ENST00000539041 NDUFC2O95298 119 aa13.83□□□□□ -0.2
SMPDL3A-203ENST00000539041 SMIM11BQ8TCY0 68 aa13.83□□□□□ -0.2
SMPDL3A-203ENST00000539041 OR13C6PQ8NH95 151 aa13.82□□□□□ -0.2
SMPDL3A-203ENST00000539041 NTN5Q8WTR8 489 aaPredicted RBP13.82□□□□□ -0.2
SMPDL3A-203ENST00000539041 MDFIQ99750 246 aa13.82□□□□□ -0.2
SMPDL3A-203ENST00000539041 GVQW2A0A096LPI5 108 aaPredicted RBP13.81□□□□□ -0.2
SMPDL3A-203ENST00000539041 TRACP01848 142 aa13.8□□□□□ -0.2
SMPDL3A-203ENST00000539041 DNAH10OSP0CZ25 163 aa13.8□□□□□ -0.2
SMPDL3A-203ENST00000539041 C1orf43Q9BWL3 253 aa13.8□□□□□ -0.2
SMPDL3A-203ENST00000539041 HUWE1Q7Z6Z7 4374 aaKnown RBP13.78□□□□□ -0.2
SMPDL3A-203ENST00000539041 ZNF561-AS1K7EIQ3 104 aa13.77□□□□□ -0.21
SMPDL3A-203ENST00000539041 FAM218AQ96MZ4 157 aa13.77□□□□□ -0.21
SMPDL3A-203ENST00000539041 C6orf48Q9UBA6 75 aa13.76□□□□□ -0.21
SMPDL3A-203ENST00000539041 LINC00588Q9Y4M8 146 aa13.76□□□□□ -0.21
SMPDL3A-203ENST00000539041 H0YGX0 51 aa13.76□□□□□ -0.21
SMPDL3A-203ENST00000539041 HIGD2BQ4VC39 106 aa13.76□□□□□ -0.21
SMPDL3A-203ENST00000539041 IGKV2D-24A0A075B6R9 120 aa13.75□□□□□ -0.21
SMPDL3A-203ENST00000539041 C15orf56Q8N910 161 aa13.75□□□□□ -0.21
SMPDL3A-203ENST00000539041 PRR3P79522 188 aaKnown RBP13.73□□□□□ -0.21
SMPDL3A-203ENST00000539041 CAMK2N2Q96S95 79 aa13.73□□□□□ -0.21
SMPDL3A-203ENST00000539041 NBEAL1Q6ZS30 2694 aa13.73□□□□□ -0.21
SMPDL3A-203ENST00000539041 C2orf48Q96LS8 159 aa13.72□□□□□ -0.21
SMPDL3A-203ENST00000539041 TEX49A0A1B0GTD5 131 aa13.71□□□□□ -0.21
SMPDL3A-203ENST00000539041 Q8NDZ9 215 aa13.71□□□□□ -0.21
SMPDL3A-203ENST00000539041 TMEM126AQ9H061 195 aa13.71□□□□□ -0.21
SMPDL3A-203ENST00000539041 NCR3O14931 201 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms