RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 CXCL5P42830 114 aa15.15■□□□□ 0.02
TRIM3-214ENST00000536344 NDUFA1O15239 70 aa15.14■□□□□ 0.01
TRIM3-214ENST00000536344 PIK3CD-AS1Q5SR53 167 aa15.14■□□□□ 0.01
TRIM3-214ENST00000536344 ATP5G1P05496 136 aa15.14■□□□□ 0.01
TRIM3-214ENST00000536344 C4orf26Q17RF5 130 aa15.14■□□□□ 0.01
TRIM3-214ENST00000536344 TIMM17BO60830 172 aa15.13■□□□□ 0.01
TRIM3-214ENST00000536344 TRACP01848 142 aa15.13■□□□□ 0.01
TRIM3-214ENST00000536344 DPH3Q96FX2 82 aa15.13■□□□□ 0.01
TRIM3-214ENST00000536344 CIRBPQ14011 172 aaKnown RBP15.11■□□□□ 0.01
TRIM3-214ENST00000536344 C14orf132Q9NPU4 83 aa15.11■□□□□ 0.01
TRIM3-214ENST00000536344 ATOX1O00244 68 aa15.11■□□□□ 0.01
TRIM3-214ENST00000536344 CSNK1G2-AS1Q8NCQ2 148 aa15.1■□□□□ 0.01
TRIM3-214ENST00000536344 OR13C6PQ8NH95 151 aa15.09■□□□□ 0.01
TRIM3-214ENST00000536344 CMC4P56277 68 aaPredicted RBP15.08■□□□□ 0.01
TRIM3-214ENST00000536344 RPL18AQ02543 176 aaKnown RBP15.08■□□□□ 0.01
TRIM3-214ENST00000536344 KRTAP24-1Q3LI83 254 aa15.08■□□□□ 0.01
TRIM3-214ENST00000536344 MALP21145 153 aa15.08■□□□□ 0
TRIM3-214ENST00000536344 RPS28P62857 69 aaKnown RBP15.08■□□□□ 0
TRIM3-214ENST00000536344 ANK2Q01484 3957 aa15.08■□□□□ 0
TRIM3-214ENST00000536344 C9orf66Q5T8R8 295 aa15.08■□□□□ 0
TRIM3-214ENST00000536344 LINC00846Q9NV44 126 aa15.08■□□□□ 0
TRIM3-214ENST00000536344 PLAC8L1A1L4L8 177 aa15.07■□□□□ 0
TRIM3-214ENST00000536344 DEFB4AO15263 64 aa15.07■□□□□ 0
TRIM3-214ENST00000536344 HRCT1Q6UXD1 115 aa15.07■□□□□ 0
TRIM3-214ENST00000536344 PRIMA1Q86XR5 153 aa15.07■□□□□ 0
TRIM3-214ENST00000536344 UPK3BQ9BT76 320 aa15.06■□□□□ 0
TRIM3-214ENST00000536344 TRGV2A0A075B6R0 118 aa15.06■□□□□ 0
TRIM3-214ENST00000536344 LINC01561Q8N1V8 128 aa15.05■□□□□ 0
TRIM3-214ENST00000536344 A0A087WYN8 130 aa15.05■□□□□ -0
TRIM3-214ENST00000536344 INAFM2P0DMQ5 153 aa15.05■□□□□ -0
TRIM3-214ENST00000536344 IL17DQ8TAD2 202 aa15.05■□□□□ -0
TRIM3-214ENST00000536344 OXLD1Q5BKU9 147 aa15.04■□□□□ -0
TRIM3-214ENST00000536344 DEFB130BP0DP73 79 aa15.03■□□□□ -0
TRIM3-214ENST00000536344 DEFB130AP0DP74 79 aa15.03■□□□□ -0
TRIM3-214ENST00000536344 LINC00242Q5T6M2 205 aa15.03■□□□□ -0
TRIM3-214ENST00000536344 DNAL4O96015 105 aa15.03■□□□□ -0
TRIM3-214ENST00000536344 DEFB135Q30KP9 77 aa15.03■□□□□ -0
TRIM3-214ENST00000536344 LOC100131303A0A0U1RQF7 123 aa15.02■□□□□ -0
TRIM3-214ENST00000536344 IGLV5-39A0A0G2JS06 123 aa15.01□□□□□ -0.01
TRIM3-214ENST00000536344 FAM222AQ5U5X8 452 aa15.01□□□□□ -0.01
TRIM3-214ENST00000536344 DGAT2L7PQ6IED9 249 aa15.01□□□□□ -0.01
TRIM3-214ENST00000536344 IGLV5-45A0A087WSX0 123 aa15.01□□□□□ -0.01
TRIM3-214ENST00000536344 SMIM1B2RUZ4 78 aa15.01□□□□□ -0.01
TRIM3-214ENST00000536344 SERP2Q8N6R1 65 aa15.01□□□□□ -0.01
TRIM3-214ENST00000536344 Q5XG85 94 aa15.01□□□□□ -0.01
TRIM3-214ENST00000536344 LINC00337Q8N6G1 96 aa15.01□□□□□ -0.01
TRIM3-214ENST00000536344 C16orf74Q96GX8 76 aa15.01□□□□□ -0.01
TRIM3-214ENST00000536344 USP17L23D6RBM5 183 aa14.99□□□□□ -0.01
TRIM3-214ENST00000536344 TMEM258P61165 79 aa14.99□□□□□ -0.01
TRIM3-214ENST00000536344 NCR3O14931 201 aa14.99□□□□□ -0.01
TRIM3-214ENST00000536344 WFDC9Q8NEX5 89 aa14.99□□□□□ -0.01
TRIM3-214ENST00000536344 NBEAL1Q6ZS30 2694 aa14.99□□□□□ -0.01
TRIM3-214ENST00000536344 CMYA5Q8N3K9 4069 aa14.98□□□□□ -0.01
TRIM3-214ENST00000536344 WIPF1O43516 503 aa14.98□□□□□ -0.01
TRIM3-214ENST00000536344 SLPIP03973 132 aa14.97□□□□□ -0.01
TRIM3-214ENST00000536344 FHL2Q14192 279 aa14.97□□□□□ -0.01
TRIM3-214ENST00000536344 IGKV2-28A0A075B6P5 120 aa14.96□□□□□ -0.01
TRIM3-214ENST00000536344 IGKV2D-28P01615 120 aa14.96□□□□□ -0.01
TRIM3-214ENST00000536344 K7EQD1 137 aa14.94□□□□□ -0.02
TRIM3-214ENST00000536344 X6R8D5 127 aa14.94□□□□□ -0.02
TRIM3-214ENST00000536344 TRGV4A0A0C4DH28 118 aa14.94□□□□□ -0.02
TRIM3-214ENST00000536344 F5H768 121 aa14.94□□□□□ -0.02
TRIM3-214ENST00000536344 SMIM11BQ8TCY0 68 aa14.94□□□□□ -0.02
TRIM3-214ENST00000536344 TENM3Q9P273 2699 aa14.93□□□□□ -0.02
TRIM3-214ENST00000536344 RPL28P46779 137 aaKnown RBP14.93□□□□□ -0.02
TRIM3-214ENST00000536344 Q6JHZ5 121 aa14.93□□□□□ -0.02
TRIM3-214ENST00000536344 CRPP02741 224 aa14.91□□□□□ -0.02
TRIM3-214ENST00000536344 LECT2O14960 151 aa14.91□□□□□ -0.02
TRIM3-214ENST00000536344 MIR7-3HGQ8N6C7 128 aa14.91□□□□□ -0.02
TRIM3-214ENST00000536344 IGHV4-30-4P0DP06 118 aa14.9□□□□□ -0.02
TRIM3-214ENST00000536344 RPL36AP83881 106 aaKnown RBP14.9□□□□□ -0.02
TRIM3-214ENST00000536344 RPL36ALQ969Q0 106 aaKnown RBP14.9□□□□□ -0.02
TRIM3-214ENST00000536344 MGAM2Q2M2H8 2515 aa14.9□□□□□ -0.02
TRIM3-214ENST00000536344 NTM-AS1Q6ZSK4 140 aa14.9□□□□□ -0.02
TRIM3-214ENST00000536344 OVOL2Q9BRP0 275 aa14.89□□□□□ -0.03
TRIM3-214ENST00000536344 SND1-IT1Q9HBX3 110 aa14.88□□□□□ -0.03
TRIM3-214ENST00000536344 TRAV23DV6A0A075B6W5 121 aa14.88□□□□□ -0.03
TRIM3-214ENST00000536344 A0A096LPF7 62 aa14.88□□□□□ -0.03
TRIM3-214ENST00000536344 KRTAP10-11P60412 298 aa14.88□□□□□ -0.03
TRIM3-214ENST00000536344 TRAV13-2A0A0B4J235 113 aa14.86□□□□□ -0.03
TRIM3-214ENST00000536344 COPS9Q8WXC6 57 aa14.86□□□□□ -0.03
TRIM3-214ENST00000536344 TOMM7Q9P0U1 55 aa14.86□□□□□ -0.03
TRIM3-214ENST00000536344 FAM19A1Q7Z5A9 133 aa14.85□□□□□ -0.03
TRIM3-214ENST00000536344 OBSCN-AS1Q96MR7 158 aa14.85□□□□□ -0.03
TRIM3-214ENST00000536344 IGHV4-28A0A0C4DH34 117 aa14.84□□□□□ -0.03
TRIM3-214ENST00000536344 GHRHP01286 108 aa14.84□□□□□ -0.03
TRIM3-214ENST00000536344 SS18Q15532 418 aa14.84□□□□□ -0.03
TRIM3-214ENST00000536344 RETNQ9HD89 108 aa14.83□□□□□ -0.04
TRIM3-214ENST00000536344 CELA1Q9UNI1 258 aa14.83□□□□□ -0.04
TRIM3-214ENST00000536344 IGKV3OR2-268A0A0C4DH90 116 aa14.82□□□□□ -0.04
TRIM3-214ENST00000536344 PRB2P02812 416 aaPredicted RBP14.82□□□□□ -0.04
TRIM3-214ENST00000536344 APOC4P55056 127 aa14.82□□□□□ -0.04
TRIM3-214ENST00000536344 C20orf197Q8N268 126 aa14.81□□□□□ -0.04
TRIM3-214ENST00000536344 TRBV10-1A0A0K0K1A3 114 aa14.81□□□□□ -0.04
TRIM3-214ENST00000536344 HTN3P15516 51 aa14.8□□□□□ -0.04
TRIM3-214ENST00000536344 LINC00158P58513 81 aa14.8□□□□□ -0.04
TRIM3-214ENST00000536344 CCL18P55774 89 aa14.8□□□□□ -0.04
TRIM3-214ENST00000536344 TRBV6-4A0A1B0GX49 114 aa14.79□□□□□ -0.04
TRIM3-214ENST00000536344 GYPEP15421 78 aa14.79□□□□□ -0.04
TRIM3-214ENST00000536344 PFN2P35080 140 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms