RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 FAM222AQ5U5X8 452 aa9.38□□□□□ -0.91
HDAC4-214ENST00000535493 LINC00526Q96FQ7 95 aa9.37□□□□□ -0.91
HDAC4-214ENST00000535493 C2orf48Q96LS8 159 aa9.37□□□□□ -0.91
HDAC4-214ENST00000535493 CCL24O00175 119 aa9.37□□□□□ -0.91
HDAC4-214ENST00000535493 C6orf226Q5I0X4 101 aa9.37□□□□□ -0.91
HDAC4-214ENST00000535493 A0A1B0GX51 115 aa9.36□□□□□ -0.91
HDAC4-214ENST00000535493 CXCL5P42830 114 aa9.36□□□□□ -0.91
HDAC4-214ENST00000535493 ITPR2Q14571 2701 aa9.36□□□□□ -0.91
HDAC4-214ENST00000535493 COX7CP15954 63 aa9.36□□□□□ -0.91
HDAC4-214ENST00000535493 UBR5O95071 2799 aaPredicted RBP9.35□□□□□ -0.91
HDAC4-214ENST00000535493 TRBV6-8A0A0A6YYG3 113 aa9.35□□□□□ -0.91
HDAC4-214ENST00000535493 PF4P02776 101 aa9.35□□□□□ -0.91
HDAC4-214ENST00000535493 HIST1H4AP62805 103 aaKnown RBP9.34□□□□□ -0.91
HDAC4-214ENST00000535493 HILS1P60008 231 aa9.34□□□□□ -0.91
HDAC4-214ENST00000535493 SS18Q15532 418 aa9.33□□□□□ -0.92
HDAC4-214ENST00000535493 LINC01561Q8N1V8 128 aa9.33□□□□□ -0.92
HDAC4-214ENST00000535493 KIR2DL5BQ8NHK3 375 aa9.33□□□□□ -0.92
HDAC4-214ENST00000535493 C9orf116Q5BN46 136 aaPredicted RBP9.33□□□□□ -0.92
HDAC4-214ENST00000535493 Q8N3U1 123 aa9.33□□□□□ -0.92
HDAC4-214ENST00000535493 FHL2Q14192 279 aa9.32□□□□□ -0.92
HDAC4-214ENST00000535493 IGLV10-54A0A075B6I4 117 aa9.32□□□□□ -0.92
HDAC4-214ENST00000535493 A0A087WZ39 114 aa9.32□□□□□ -0.92
HDAC4-214ENST00000535493 LINC00959A0A1B0GUT2 108 aa9.32□□□□□ -0.92
HDAC4-214ENST00000535493 IBA57-AS1B1ANH7 110 aa9.31□□□□□ -0.92
HDAC4-214ENST00000535493 ESM1Q9NQ30 184 aa9.31□□□□□ -0.92
HDAC4-214ENST00000535493 NOTCH2Q04721 2471 aa9.31□□□□□ -0.92
HDAC4-214ENST00000535493 H0YGX0 51 aa9.31□□□□□ -0.92
HDAC4-214ENST00000535493 RPL18AQ02543 176 aaKnown RBP9.31□□□□□ -0.92
HDAC4-214ENST00000535493 TRBV6-4A0A1B0GX49 114 aa9.3□□□□□ -0.92
HDAC4-214ENST00000535493 ATOX1O00244 68 aa9.3□□□□□ -0.92
HDAC4-214ENST00000535493 C16orf74Q96GX8 76 aa9.3□□□□□ -0.92
HDAC4-214ENST00000535493 DNAJC9-AS1A6NH13 148 aa9.29□□□□□ -0.92
HDAC4-214ENST00000535493 ORMDL1Q9P0S3 153 aa9.29□□□□□ -0.92
HDAC4-214ENST00000535493 TRRAPQ9Y4A5 3859 aa9.29□□□□□ -0.92
HDAC4-214ENST00000535493 USP17L23D6RBM5 183 aa9.28□□□□□ -0.92
HDAC4-214ENST00000535493 GYPEP15421 78 aa9.28□□□□□ -0.92
HDAC4-214ENST00000535493 FAM19A5Q7Z5A7 132 aaPredicted RBP9.28□□□□□ -0.92
HDAC4-214ENST00000535493 OBSCN-AS1Q96MR7 158 aa9.28□□□□□ -0.92
HDAC4-214ENST00000535493 DSCR8Q96T75 97 aa9.28□□□□□ -0.92
HDAC4-214ENST00000535493 FAM19A1Q7Z5A9 133 aa9.27□□□□□ -0.92
HDAC4-214ENST00000535493 TRAV23DV6A0A075B6W5 121 aa9.27□□□□□ -0.93
HDAC4-214ENST00000535493 DEFB4AO15263 64 aa9.27□□□□□ -0.93
HDAC4-214ENST00000535493 CRYGAP11844 174 aa9.27□□□□□ -0.93
HDAC4-214ENST00000535493 NANOS2P60321 138 aaKnown RBP9.27□□□□□ -0.93
HDAC4-214ENST00000535493 CSNK1G2-AS1Q8NCQ2 148 aa9.27□□□□□ -0.93
HDAC4-214ENST00000535493 OVOL2Q9BRP0 275 aa9.27□□□□□ -0.93
HDAC4-214ENST00000535493 Q8NDZ9 215 aa9.26□□□□□ -0.93
HDAC4-214ENST00000535493 TRAV25A0A0B4J276 109 aa9.26□□□□□ -0.93
HDAC4-214ENST00000535493 TENM4Q6N022 2769 aa9.26□□□□□ -0.93
HDAC4-214ENST00000535493 C19orf73Q9NVV2 129 aa9.25□□□□□ -0.93
HDAC4-214ENST00000535493 Q6JHZ5 121 aa9.25□□□□□ -0.93
HDAC4-214ENST00000535493 ENHOQ6UWT2 76 aa9.25□□□□□ -0.93
HDAC4-214ENST00000535493 LINC00269Q8N2A0 174 aa9.25□□□□□ -0.93
HDAC4-214ENST00000535493 WFDC11Q8NEX6 87 aa9.25□□□□□ -0.93
HDAC4-214ENST00000535493 DEFB113Q30KQ7 82 aa9.25□□□□□ -0.93
HDAC4-214ENST00000535493 TENM1Q9UKZ4 2725 aa9.24□□□□□ -0.93
HDAC4-214ENST00000535493 ANK3Q12955 4377 aaKnown RBP9.24□□□□□ -0.93
HDAC4-214ENST00000535493 TMEM86BQ8N661 226 aa9.24□□□□□ -0.93
HDAC4-214ENST00000535493 Q8N814 137 aa9.24□□□□□ -0.93
HDAC4-214ENST00000535493 SPATA3Q8NHX4 192 aa9.24□□□□□ -0.93
HDAC4-214ENST00000535493 BBC3Q96PG8 261 aaPredicted RBP9.24□□□□□ -0.93
HDAC4-214ENST00000535493 PKD1L1Q8TDX9 2849 aa9.23□□□□□ -0.93
HDAC4-214ENST00000535493 CCKP06307 115 aa9.23□□□□□ -0.93
HDAC4-214ENST00000535493 SERP2Q8N6R1 65 aa9.23□□□□□ -0.93
HDAC4-214ENST00000535493 J3KT08 172 aa9.23□□□□□ -0.93
HDAC4-214ENST00000535493 C6orf99Q4VX62 202 aa9.23□□□□□ -0.93
HDAC4-214ENST00000535493 M0R2N4 97 aa9.22□□□□□ -0.93
HDAC4-214ENST00000535493 OXTP01178 125 aa9.22□□□□□ -0.93
HDAC4-214ENST00000535493 LINC01006Q8NI28 216 aa9.22□□□□□ -0.93
HDAC4-214ENST00000535493 UPK3BQ9BT76 320 aa9.22□□□□□ -0.93
HDAC4-214ENST00000535493 UNC79Q9P2D8 2635 aa9.22□□□□□ -0.93
HDAC4-214ENST00000535493 LY6G6DO95868 133 aa9.21□□□□□ -0.93
HDAC4-214ENST00000535493 C6orf223Q8N319 242 aa9.21□□□□□ -0.94
HDAC4-214ENST00000535493 GHRHP01286 108 aa9.2□□□□□ -0.94
HDAC4-214ENST00000535493 PDZD2O15018 2839 aa9.2□□□□□ -0.94
HDAC4-214ENST00000535493 IGLV1-51P01701 117 aa9.19□□□□□ -0.94
HDAC4-214ENST00000535493 DPH3Q96FX2 82 aa9.19□□□□□ -0.94
HDAC4-214ENST00000535493 ANGP03950 147 aaKnown RBP9.19□□□□□ -0.94
HDAC4-214ENST00000535493 KRTAP1-3Q8IUG1 177 aa9.19□□□□□ -0.94
HDAC4-214ENST00000535493 C10orf25Q5T742 122 aa9.18□□□□□ -0.94
HDAC4-214ENST00000535493 Q8IZM0 81 aa9.18□□□□□ -0.94
HDAC4-214ENST00000535493 TEP1Q99973 2627 aaKnown RBP9.18□□□□□ -0.94
HDAC4-214ENST00000535493 KIAA0087Q14695 138 aa9.18□□□□□ -0.94
HDAC4-214ENST00000535493 S100A7L2Q5SY68 101 aa9.17□□□□□ -0.94
HDAC4-214ENST00000535493 LINC00482Q8N8I6 264 aa9.17□□□□□ -0.94
HDAC4-214ENST00000535493 CHCHD10Q8WYQ3 142 aaPredicted RBP9.17□□□□□ -0.94
HDAC4-214ENST00000535493 TMEM256-PLSCR3K7ERE1 68 aa9.17□□□□□ -0.94
HDAC4-214ENST00000535493 C20orf197Q8N268 126 aa9.17□□□□□ -0.94
HDAC4-214ENST00000535493 HIVEP1P15822 2718 aa9.16□□□□□ -0.94
HDAC4-214ENST00000535493 UNQ6190/PRO20217Q6UXQ8 127 aa9.16□□□□□ -0.94
HDAC4-214ENST00000535493 ATRQ13535 2644 aa9.16□□□□□ -0.94
HDAC4-214ENST00000535493 FASNP49327 2511 aaKnown RBP9.16□□□□□ -0.94
HDAC4-214ENST00000535493 SMIM9A6NGZ8 99 aa9.16□□□□□ -0.94
HDAC4-214ENST00000535493 LAMTOR3Q9UHA4 124 aa9.16□□□□□ -0.94
HDAC4-214ENST00000535493 HELZ2Q9BYK8 2649 aaKnown RBP9.14□□□□□ -0.95
HDAC4-214ENST00000535493 JMJD7-PLA2G4BH0Y9G9 81 aa9.14□□□□□ -0.95
HDAC4-214ENST00000535493 C4orf26Q17RF5 130 aa9.14□□□□□ -0.95
HDAC4-214ENST00000535493 HAMPP81172 84 aa9.14□□□□□ -0.95
HDAC4-214ENST00000535493 REG3AQ06141 175 aa9.14□□□□□ -0.95
HDAC4-214ENST00000535493 A0A1B0GUV1 79 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms