RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 CDKN2A-AS1Q9UH64 79 aa11.39□□□□□ -0.59
NDUFS3-213ENST00000534716 TMEM218A2RU14 115 aa11.38□□□□□ -0.59
NDUFS3-213ENST00000534716 LINC01546A6NGU7 62 aa11.38□□□□□ -0.59
NDUFS3-213ENST00000534716 UBE2BP63146 152 aa11.38□□□□□ -0.59
NDUFS3-213ENST00000534716 TOMM7Q9P0U1 55 aa11.38□□□□□ -0.59
NDUFS3-213ENST00000534716 LINC01549A6NIU2 74 aa11.37□□□□□ -0.59
NDUFS3-213ENST00000534716 KIAA1644Q3SXP7 199 aa11.37□□□□□ -0.59
NDUFS3-213ENST00000534716 F8VRH5 84 aa11.36□□□□□ -0.59
NDUFS3-213ENST00000534716 KRTAP1-4P0C5Y4 121 aa11.36□□□□□ -0.59
NDUFS3-213ENST00000534716 PRR26Q8N8Z3 221 aa11.36□□□□□ -0.59
NDUFS3-213ENST00000534716 GNB1LQ9BYB4 327 aa11.36□□□□□ -0.59
NDUFS3-213ENST00000534716 GEMIN7Q9H840 131 aaKnown RBP11.36□□□□□ -0.59
NDUFS3-213ENST00000534716 IGLV1-50A0A075B6I6 118 aa11.35□□□□□ -0.59
NDUFS3-213ENST00000534716 CXCL5P42830 114 aa11.35□□□□□ -0.59
NDUFS3-213ENST00000534716 SCGB3A1Q96QR1 104 aa11.34□□□□□ -0.59
NDUFS3-213ENST00000534716 SEC11CQ9BY50 192 aa11.34□□□□□ -0.59
NDUFS3-213ENST00000534716 IGLV5-45A0A087WSX0 123 aa11.33□□□□□ -0.6
NDUFS3-213ENST00000534716 TINCRA0A1B0GVN0 87 aa11.33□□□□□ -0.6
NDUFS3-213ENST00000534716 IFITM2Q01629 132 aa11.33□□□□□ -0.6
NDUFS3-213ENST00000534716 LINC00469Q8N7U9 141 aa11.33□□□□□ -0.6
NDUFS3-213ENST00000534716 C22orf24Q9Y442 160 aa11.33□□□□□ -0.6
NDUFS3-213ENST00000534716 SMIM1B2RUZ4 78 aa11.32□□□□□ -0.6
NDUFS3-213ENST00000534716 S100PP25815 95 aa11.32□□□□□ -0.6
NDUFS3-213ENST00000534716 LBHQ53QV2 105 aaPredicted RBP11.32□□□□□ -0.6
NDUFS3-213ENST00000534716 PDZD11Q5EBL8 140 aa11.32□□□□□ -0.6
NDUFS3-213ENST00000534716 TP73-AS1Q9UF72 201 aa11.32□□□□□ -0.6
NDUFS3-213ENST00000534716 LPAP08519 4548 aa11.31□□□□□ -0.6
NDUFS3-213ENST00000534716 NUPR1O60356 82 aa11.31□□□□□ -0.6
NDUFS3-213ENST00000534716 COX19Q49B96 90 aa11.31□□□□□ -0.6
NDUFS3-213ENST00000534716 XAGE1AQ9HD64 81 aa11.31□□□□□ -0.6
NDUFS3-213ENST00000534716 ZNF861PO60384 105 aa11.3□□□□□ -0.6
NDUFS3-213ENST00000534716 CST9LQ9H4G1 147 aa11.3□□□□□ -0.6
NDUFS3-213ENST00000534716 CARHSP1Q9Y2V2 147 aaKnown RBP11.29□□□□□ -0.6
NDUFS3-213ENST00000534716 RPL13AP40429 203 aaKnown RBP11.28□□□□□ -0.6
NDUFS3-213ENST00000534716 COX7B2Q8TF08 81 aa11.28□□□□□ -0.6
NDUFS3-213ENST00000534716 C10orf91Q5T1B1 145 aa11.27□□□□□ -0.61
NDUFS3-213ENST00000534716 MRPL55Q7Z7F7 128 aaKnown RBP11.27□□□□□ -0.61
NDUFS3-213ENST00000534716 PMVKQ15126 192 aa11.26□□□□□ -0.61
NDUFS3-213ENST00000534716 MRPL18Q9H0U6 180 aaKnown RBP11.25□□□□□ -0.61
NDUFS3-213ENST00000534716 RHEBQ15382 184 aa11.24□□□□□ -0.61
NDUFS3-213ENST00000534716 FA2HQ7L5A8 372 aa11.24□□□□□ -0.61
NDUFS3-213ENST00000534716 FABP9Q0Z7S8 132 aa11.23□□□□□ -0.61
NDUFS3-213ENST00000534716 IGLV5-37A0A075B6J1 123 aa11.22□□□□□ -0.61
NDUFS3-213ENST00000534716 BCE1O60756 84 aa11.22□□□□□ -0.61
NDUFS3-213ENST00000534716 SPINK8P0C7L1 97 aa11.22□□□□□ -0.61
NDUFS3-213ENST00000534716 SMCO4Q9NRQ5 59 aa11.22□□□□□ -0.61
NDUFS3-213ENST00000534716 H3BRM9 83 aa11.21□□□□□ -0.61
NDUFS3-213ENST00000534716 COMMD7Q86VX2 200 aa11.21□□□□□ -0.61
NDUFS3-213ENST00000534716 LINC00167Q96N53 147 aa11.21□□□□□ -0.61
NDUFS3-213ENST00000534716 IGLV5-39A0A0G2JS06 123 aa11.2□□□□□ -0.62
NDUFS3-213ENST00000534716 IGLC3P0DOY3 106 aa11.2□□□□□ -0.62
NDUFS3-213ENST00000534716 RPL28P46779 137 aaKnown RBP11.2□□□□□ -0.62
NDUFS3-213ENST00000534716 A0A096LNJ9 63 aa11.19□□□□□ -0.62
NDUFS3-213ENST00000534716 RPS10P5Q9NQ39 176 aa11.19□□□□□ -0.62
NDUFS3-213ENST00000534716 ATP5LO75964 103 aa11.17□□□□□ -0.62
NDUFS3-213ENST00000534716 RAB5BP61020 215 aa11.17□□□□□ -0.62
NDUFS3-213ENST00000534716 URB1-AS1Q96HZ7 61 aa11.17□□□□□ -0.62
NDUFS3-213ENST00000534716 RPL37AP8A6NKH3 93 aa11.16□□□□□ -0.62
NDUFS3-213ENST00000534716 LINC00614P0C842 121 aa11.16□□□□□ -0.62
NDUFS3-213ENST00000534716 KRTAP13-1Q8IUC0 172 aa11.15□□□□□ -0.62
NDUFS3-213ENST00000534716 C18orf32Q8TCD1 76 aa11.15□□□□□ -0.62
NDUFS3-213ENST00000534716 ZNF22P17026 224 aaPredicted RBP11.14□□□□□ -0.63
NDUFS3-213ENST00000534716 NKAPP1Q8N9T2 125 aa11.14□□□□□ -0.63
NDUFS3-213ENST00000534716 TRAPPC1Q9Y5R8 145 aa11.14□□□□□ -0.63
NDUFS3-213ENST00000534716 GAGE10A6NGK3 116 aa11.13□□□□□ -0.63
NDUFS3-213ENST00000534716 HBDP02042 147 aa11.13□□□□□ -0.63
NDUFS3-213ENST00000534716 COX17Q14061 63 aa11.13□□□□□ -0.63
NDUFS3-213ENST00000534716 A0A087X002 238 aa11.12□□□□□ -0.63
NDUFS3-213ENST00000534716 CRYGAP11844 174 aa11.11□□□□□ -0.63
NDUFS3-213ENST00000534716 NDUFA6P56556 154 aa11.11□□□□□ -0.63
NDUFS3-213ENST00000534716 MUC2Q02817 5179 aa11.11□□□□□ -0.63
NDUFS3-213ENST00000534716 PFN2P35080 140 aa11.1□□□□□ -0.63
NDUFS3-213ENST00000534716 SFTA2Q6UW10 78 aa11.1□□□□□ -0.63
NDUFS3-213ENST00000534716 KRTAP9-2Q9BYQ4 174 aa11.1□□□□□ -0.63
NDUFS3-213ENST00000534716 ERG28Q9UKR5 140 aa11.1□□□□□ -0.63
NDUFS3-213ENST00000534716 VPREB1P12018 145 aa11.09□□□□□ -0.63
NDUFS3-213ENST00000534716 PRR4Q16378 134 aa11.09□□□□□ -0.63
NDUFS3-213ENST00000534716 SND1-IT1Q9HBX3 110 aa11.09□□□□□ -0.63
NDUFS3-213ENST00000534716 PMCHL1Q16048 86 aa11.08□□□□□ -0.64
NDUFS3-213ENST00000534716 IGKV2-28A0A075B6P5 120 aa11.07□□□□□ -0.64
NDUFS3-213ENST00000534716 C11orf86A6NJI1 115 aa11.07□□□□□ -0.64
NDUFS3-213ENST00000534716 IGKV2D-28P01615 120 aa11.07□□□□□ -0.64
NDUFS3-213ENST00000534716 UBE2AP49459 152 aa11.07□□□□□ -0.64
NDUFS3-213ENST00000534716 TYMSOSQ8TAI1 123 aa11.07□□□□□ -0.64
NDUFS3-213ENST00000534716 SCO1O75880 301 aa11.06□□□□□ -0.64
NDUFS3-213ENST00000534716 RPL24P83731 157 aaKnown RBP11.06□□□□□ -0.64
NDUFS3-213ENST00000534716 FAM229BQ4G0N7 80 aa11.06□□□□□ -0.64
NDUFS3-213ENST00000534716 BAGE3Q86Y29 109 aa11.06□□□□□ -0.64
NDUFS3-213ENST00000534716 ZNF625Q96I27 306 aaPredicted RBP11.06□□□□□ -0.64
NDUFS3-213ENST00000534716 SNAPINO95295 136 aa11.04□□□□□ -0.64
NDUFS3-213ENST00000534716 APOC3P02656 99 aa11.04□□□□□ -0.64
NDUFS3-213ENST00000534716 KRTAP13-2Q52LG2 175 aa11.04□□□□□ -0.64
NDUFS3-213ENST00000534716 TMEM170BQ5T4T1 132 aa11.04□□□□□ -0.64
NDUFS3-213ENST00000534716 SVBPQ8N300 66 aa11.04□□□□□ -0.64
NDUFS3-213ENST00000534716 TSPAN13O95857 204 aa11.03□□□□□ -0.64
NDUFS3-213ENST00000534716 TMEM126AQ9H061 195 aa11.03□□□□□ -0.64
NDUFS3-213ENST00000534716 ANAPC11Q9NYG5 84 aa11.03□□□□□ -0.64
NDUFS3-213ENST00000534716 TRAV12-1A0A0B4J245 112 aa11.02□□□□□ -0.65
NDUFS3-213ENST00000534716 Q8NDZ9 215 aa11.02□□□□□ -0.65
NDUFS3-213ENST00000534716 YPEL4Q96NS1 127 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms