RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 DAND5Q8N907 189 aa2.61□□□□□ -1.99
USP47-209ENST00000530041 DEFB104AQ8WTQ1 72 aa2.61□□□□□ -1.99
USP47-209ENST00000530041 CLEC2BQ92478 149 aa2.61□□□□□ -1.99
USP47-209ENST00000530041 DNAJC30Q96LL9 226 aa2.61□□□□□ -1.99
USP47-209ENST00000530041 LINC00467Q9BRT7 94 aa2.61□□□□□ -1.99
USP47-209ENST00000530041 UBE2D4Q9Y2X8 147 aa2.61□□□□□ -1.99
USP47-209ENST00000530041 C22orf24Q9Y442 160 aa2.61□□□□□ -1.99
USP47-209ENST00000530041 CNOT1A5YKK6 2376 aaKnown RBP2.61□□□□□ -1.99
USP47-209ENST00000530041 TRIOO75962 3097 aa2.61□□□□□ -1.99
USP47-209ENST00000530041 NCOR1O75376 2440 aa2.61□□□□□ -1.99
USP47-209ENST00000530041 ABCA4P78363 2273 aa2.61□□□□□ -1.99
USP47-209ENST00000530041 OTOGLQ3ZCN5 2332 aa2.6□□□□□ -1.99
USP47-209ENST00000530041 PCNX1Q96RV3 2341 aa2.6□□□□□ -1.99
USP47-209ENST00000530041 SPEGQ15772 3267 aa2.6□□□□□ -1.99
USP47-209ENST00000530041 FAM236DA0A1B0GTK5 79 aa2.6□□□□□ -1.99
USP47-209ENST00000530041 A0A1B0GX51 115 aa2.6□□□□□ -1.99
USP47-209ENST00000530041 LRCOL1A6NCL2 159 aa2.6□□□□□ -1.99
USP47-209ENST00000530041 UQCRQO14949 82 aa2.6□□□□□ -1.99
USP47-209ENST00000530041 FAM236CP0DP71 79 aa2.6□□□□□ -1.99
USP47-209ENST00000530041 SNRPD3P62318 126 aaKnown RBP2.6□□□□□ -1.99
USP47-209ENST00000530041 HIST1H4AP62805 103 aaKnown RBP2.6□□□□□ -1.99
USP47-209ENST00000530041 FAM74A4Q5TZK3 123 aa2.6□□□□□ -1.99
USP47-209ENST00000530041 C3orf22Q8N5N4 141 aa2.6□□□□□ -1.99
USP47-209ENST00000530041 LINC00308Q8TCZ7 52 aa2.6□□□□□ -1.99
USP47-209ENST00000530041 SMCR5Q8TEV8 140 aa2.6□□□□□ -1.99
USP47-209ENST00000530041 COPS9Q8WXC6 57 aa2.6□□□□□ -1.99
USP47-209ENST00000530041 LINC00526Q96FQ7 95 aa2.6□□□□□ -1.99
USP47-209ENST00000530041 USP34Q70CQ2 3546 aa2.6□□□□□ -1.99
USP47-209ENST00000530041 VCANP13611 3396 aa2.6□□□□□ -1.99
USP47-209ENST00000530041 IGKV3-7A0A075B6H7 116 aa2.59□□□□□ -1.99
USP47-209ENST00000530041 TRAV12-2A0A075B6T6 113 aa2.59□□□□□ -1.99
USP47-209ENST00000530041 FAM236AA0A1B0GUQ0 79 aa2.59□□□□□ -1.99
USP47-209ENST00000530041 FAM236BA0A1B0GV22 79 aa2.59□□□□□ -1.99
USP47-209ENST00000530041 K7ERS5 55 aa2.59□□□□□ -1.99
USP47-209ENST00000530041 IGHV3-53P01767 116 aa2.59□□□□□ -1.99
USP47-209ENST00000530041 PSMB8P28062 276 aa2.59□□□□□ -1.99
USP47-209ENST00000530041 RPS28P62857 69 aaKnown RBP2.59□□□□□ -1.99
USP47-209ENST00000530041 CIRBPQ14011 172 aaKnown RBP2.59□□□□□ -1.99
USP47-209ENST00000530041 SOSTDC1Q6X4U4 206 aa2.59□□□□□ -1.99
USP47-209ENST00000530041 BPESC1Q9GZL8 116 aa2.59□□□□□ -1.99
USP47-209ENST00000530041 CDKN2A-AS1Q9UH64 79 aa2.59□□□□□ -1.99
USP47-209ENST00000530041 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.58□□□□□ -2
USP47-209ENST00000530041 KNCNA6PVL3 124 aa2.58□□□□□ -2
USP47-209ENST00000530041 H3BUX3 64 aa2.58□□□□□ -2
USP47-209ENST00000530041 BAALC-AS2P0C853 105 aa2.58□□□□□ -2
USP47-209ENST00000530041 INAFM2P0DMQ5 153 aa2.58□□□□□ -2
USP47-209ENST00000530041 CRYGAP11844 174 aa2.58□□□□□ -2
USP47-209ENST00000530041 COX7CP15954 63 aa2.58□□□□□ -2
USP47-209ENST00000530041 RPL28P46779 137 aaKnown RBP2.58□□□□□ -2
USP47-209ENST00000530041 BLCAPP62952 87 aa2.58□□□□□ -2
USP47-209ENST00000530041 COX6A2Q02221 97 aa2.58□□□□□ -2
USP47-209ENST00000530041 SPINK13Q1W4C9 94 aa2.58□□□□□ -2
USP47-209ENST00000530041 C9orf153Q5TBE3 101 aa2.58□□□□□ -2
USP47-209ENST00000530041 DAZ4Q86SG3 579 aaKnown RBP2.58□□□□□ -2
USP47-209ENST00000530041 OR13C6PQ8NH95 151 aa2.58□□□□□ -2
USP47-209ENST00000530041 ZNF625Q96I27 306 aaPredicted RBP2.58□□□□□ -2
USP47-209ENST00000530041 OBSCN-AS1Q96MR7 158 aa2.58□□□□□ -2
USP47-209ENST00000530041 TPRP12270 2363 aaKnown RBP2.58□□□□□ -2
USP47-209ENST00000530041 FRYLO94915 3013 aa2.58□□□□□ -2
USP47-209ENST00000530041 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.57□□□□□ -2
USP47-209ENST00000530041 TRAV13-2A0A0B4J235 113 aa2.57□□□□□ -2
USP47-209ENST00000530041 IGKV2-29A2NJV5 120 aaPredicted RBP2.57□□□□□ -2
USP47-209ENST00000530041 ATOX1O00244 68 aa2.57□□□□□ -2
USP47-209ENST00000530041 LINC00694P0DN24 101 aa2.57□□□□□ -2
USP47-209ENST00000530041 LY6EQ16553 131 aa2.57□□□□□ -2
USP47-209ENST00000530041 Q6JHZ5 121 aa2.57□□□□□ -2
USP47-209ENST00000530041 BRD3OSQ6XYD6 125 aa2.57□□□□□ -2
USP47-209ENST00000530041 Q8N2B8 174 aa2.57□□□□□ -2
USP47-209ENST00000530041 WDR87Q6ZQQ6 2873 aa2.56□□□□□ -2
USP47-209ENST00000530041 CACNA1BQ00975 2339 aa2.56□□□□□ -2
USP47-209ENST00000530041 CACNA1HO95180 2353 aa2.56□□□□□ -2
USP47-209ENST00000530041 IGHV3-73A0A0B4J1V6 119 aa2.56□□□□□ -2
USP47-209ENST00000530041 TRBV10-1A0A0K0K1A3 114 aa2.56□□□□□ -2
USP47-209ENST00000530041 H0YGX0 51 aa2.56□□□□□ -2
USP47-209ENST00000530041 J3KT08 172 aa2.56□□□□□ -2
USP47-209ENST00000530041 NPC2P61916 151 aa2.56□□□□□ -2
USP47-209ENST00000530041 MIR7-3HGQ8N6C7 128 aa2.56□□□□□ -2
USP47-209ENST00000530041 C10orf105Q8TEF2 133 aa2.56□□□□□ -2
USP47-209ENST00000530041 B9D2Q9BPU9 175 aa2.56□□□□□ -2
USP47-209ENST00000530041 UPK3BQ9BT76 320 aa2.56□□□□□ -2
USP47-209ENST00000530041 MED13LQ71F56 2210 aa2.56□□□□□ -2
USP47-209ENST00000530041 ACACAQ13085 2346 aa2.56□□□□□ -2
USP47-209ENST00000530041 CEP250Q9BV73 2442 aa2.56□□□□□ -2
USP47-209ENST00000530041 IGLV4-60A0A075B6I1 120 aa2.55□□□□□ -2
USP47-209ENST00000530041 MSMBP08118 114 aa2.55□□□□□ -2
USP47-209ENST00000530041 DEFB131AP59861 70 aa2.55□□□□□ -2
USP47-209ENST00000530041 Q5W150 140 aa2.55□□□□□ -2
USP47-209ENST00000530041 RP1L1Q8IWN7 2480 aaPredicted RBP2.55□□□□□ -2
USP47-209ENST00000530041 ANKHD1Q8IWZ3 2542 aaKnown RBP2.55□□□□□ -2
USP47-209ENST00000530041 WDFY3Q8IZQ1 3526 aa2.55□□□□□ -2
USP47-209ENST00000530041 C3orf56Q8N813 242 aa2.55□□□□□ -2
USP47-209ENST00000530041 CDC42SE2Q9NRR3 84 aa2.55□□□□□ -2
USP47-209ENST00000530041 KLK5Q9Y337 293 aaPredicted RBP2.55□□□□□ -2
USP47-209ENST00000530041 DOPEY2Q9Y3R5 2298 aa2.54□□□□□ -2
USP47-209ENST00000530041 CFAP54Q96N23 3096 aa2.54□□□□□ -2
USP47-209ENST00000530041 FRYQ5TBA9 3013 aa2.54□□□□□ -2
USP47-209ENST00000530041 CRPP02741 224 aa2.54□□□□□ -2
USP47-209ENST00000530041 TMEM258P61165 79 aa2.54□□□□□ -2
USP47-209ENST00000530041 C10orf99Q6UWK7 81 aa2.54□□□□□ -2
USP47-209ENST00000530041 LYPD5Q6UWN5 251 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms