RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-223	ENST00000522746		F8W1H4	67 aa		11.35	□□□□□ -0.59
FAM49B-223	ENST00000522746	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.34	□□□□□ -0.59
FAM49B-223	ENST00000522746	C6orf226	Q5I0X4	101 aa		11.34	□□□□□ -0.59
FAM49B-223	ENST00000522746	C11orf45	Q8TAV5	145 aa		11.34	□□□□□ -0.59
FAM49B-223	ENST00000522746	MIR7-3HG	Q8N6C7	128 aa		11.34	□□□□□ -0.59
FAM49B-223	ENST00000522746	KLK12	Q9UKR0	248 aa		11.34	□□□□□ -0.59
FAM49B-223	ENST00000522746	COX7A2L	O14548	114 aa		11.33	□□□□□ -0.6
FAM49B-223	ENST00000522746	TRIAP1	O43715	76 aa		11.33	□□□□□ -0.6
FAM49B-223	ENST00000522746	RPL13A	P40429	203 aa	Known RBP	11.33	□□□□□ -0.6
FAM49B-223	ENST00000522746	LINC01561	Q8N1V8	128 aa		11.33	□□□□□ -0.6
FAM49B-223	ENST00000522746	LINC00158	P58513	81 aa		11.32	□□□□□ -0.6
FAM49B-223	ENST00000522746	C2orf82	Q6UX34	121 aa		11.32	□□□□□ -0.6
FAM49B-223	ENST00000522746	WFDC10B	Q8IUB3	73 aa		11.32	□□□□□ -0.6
FAM49B-223	ENST00000522746		Q8IZM0	81 aa		11.32	□□□□□ -0.6
FAM49B-223	ENST00000522746	COPS9	Q8WXC6	57 aa		11.32	□□□□□ -0.6
FAM49B-223	ENST00000522746	TRBV20-1	A0A075B6N2	111 aa		11.31	□□□□□ -0.6
FAM49B-223	ENST00000522746	DEFB131B	A0A096LNP1	70 aa		11.31	□□□□□ -0.6
FAM49B-223	ENST00000522746	FOXI1	Q12951	378 aa		11.31	□□□□□ -0.6
FAM49B-223	ENST00000522746	TRBV30	A0A0K0K1B3	111 aa		11.31	□□□□□ -0.6
FAM49B-223	ENST00000522746	PFN2	P35080	140 aa		11.31	□□□□□ -0.6
FAM49B-223	ENST00000522746	PRR34	Q9NV39	138 aa		11.31	□□□□□ -0.6
FAM49B-223	ENST00000522746	IBA57-AS1	B1ANH7	110 aa		11.3	□□□□□ -0.6
FAM49B-223	ENST00000522746	ENHO	Q6UWT2	76 aa		11.3	□□□□□ -0.6
FAM49B-223	ENST00000522746	MAL	P21145	153 aa		11.3	□□□□□ -0.6
FAM49B-223	ENST00000522746	SMCP	P49901	116 aa	Predicted RBP	11.3	□□□□□ -0.6
FAM49B-223	ENST00000522746	SPATA25	Q9BR10	227 aa		11.3	□□□□□ -0.6
FAM49B-223	ENST00000522746	GAGE12H	A6NDE8	117 aa		11.29	□□□□□ -0.6
FAM49B-223	ENST00000522746	KIAA0087	Q14695	138 aa		11.29	□□□□□ -0.6
FAM49B-223	ENST00000522746	TM2D3	Q9BRN9	247 aa		11.29	□□□□□ -0.6
FAM49B-223	ENST00000522746	ESRG	Q1W209	222 aa		11.28	□□□□□ -0.6
FAM49B-223	ENST00000522746	ETDB	Q3ZM63	59 aa		11.28	□□□□□ -0.6
FAM49B-223	ENST00000522746	PPDPF	Q9H3Y8	114 aa		11.28	□□□□□ -0.6
FAM49B-223	ENST00000522746	RNF151	Q2KHN1	245 aa		11.27	□□□□□ -0.6
FAM49B-223	ENST00000522746		K7ERU9	68 aa		11.27	□□□□□ -0.61
FAM49B-223	ENST00000522746	CKS1B	P61024	79 aa		11.27	□□□□□ -0.61
FAM49B-223	ENST00000522746	UBE2W	Q96B02	151 aa		11.27	□□□□□ -0.61
FAM49B-223	ENST00000522746	CCL18	P55774	89 aa		11.26	□□□□□ -0.61
FAM49B-223	ENST00000522746	CFAP161	Q6P656	301 aa		11.26	□□□□□ -0.61
FAM49B-223	ENST00000522746	SND1-IT1	Q9HBX3	110 aa		11.26	□□□□□ -0.61
FAM49B-223	ENST00000522746	COL7A1	Q02388	2944 aa		11.25	□□□□□ -0.61
FAM49B-223	ENST00000522746	DNHD1	Q96M86	4753 aa		11.25	□□□□□ -0.61
FAM49B-223	ENST00000522746	CRP	P02741	224 aa		11.24	□□□□□ -0.61
FAM49B-223	ENST00000522746	IGKV2-28	A0A075B6P5	120 aa		11.23	□□□□□ -0.61
FAM49B-223	ENST00000522746	IGKV2D-28	P01615	120 aa		11.23	□□□□□ -0.61
FAM49B-223	ENST00000522746	ATXN8	Q156A1	80 aa		11.23	□□□□□ -0.61
FAM49B-223	ENST00000522746	CLEC2B	Q92478	149 aa		11.23	□□□□□ -0.61
FAM49B-223	ENST00000522746	DNAH9	Q9NYC9	4486 aa		11.22	□□□□□ -0.61
FAM49B-223	ENST00000522746		C9JAW5	83 aa		11.22	□□□□□ -0.61
FAM49B-223	ENST00000522746	COX6C	P09669	75 aa		11.22	□□□□□ -0.61
FAM49B-223	ENST00000522746	CXCL5	P42830	114 aa		11.22	□□□□□ -0.61
FAM49B-223	ENST00000522746	C6orf223	Q8N319	242 aa		11.22	□□□□□ -0.61
FAM49B-223	ENST00000522746	LINC00526	Q96FQ7	95 aa		11.22	□□□□□ -0.61
FAM49B-223	ENST00000522746	KLK5	Q9Y337	293 aa	Predicted RBP	11.22	□□□□□ -0.61
FAM49B-223	ENST00000522746	C9orf116	Q5BN46	136 aa	Predicted RBP	11.21	□□□□□ -0.61
FAM49B-223	ENST00000522746	LINC00337	Q8N6G1	96 aa		11.21	□□□□□ -0.61
FAM49B-223	ENST00000522746	SPAG11B	Q08648	103 aa		11.21	□□□□□ -0.62
FAM49B-223	ENST00000522746	TRAV10	A0A0B4J240	114 aa		11.2	□□□□□ -0.62
FAM49B-223	ENST00000522746	TRAV8-4	A0A0B4J246	113 aa		11.2	□□□□□ -0.62
FAM49B-223	ENST00000522746	LINC01620	Q4KN68	170 aa		11.2	□□□□□ -0.62
FAM49B-223	ENST00000522746	SLC25A20	O43772	301 aa		11.19	□□□□□ -0.62
FAM49B-223	ENST00000522746	C10orf25	Q5T742	122 aa		11.19	□□□□□ -0.62
FAM49B-223	ENST00000522746	TRAV13-2	A0A0B4J235	113 aa		11.18	□□□□□ -0.62
FAM49B-223	ENST00000522746	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.18	□□□□□ -0.62
FAM49B-223	ENST00000522746	STAB2	Q8WWQ8	2551 aa		11.18	□□□□□ -0.62
FAM49B-223	ENST00000522746	KRTAP26-1	Q6PEX3	210 aa		11.17	□□□□□ -0.62
FAM49B-223	ENST00000522746	VPS25	Q9BRG1	176 aa		11.17	□□□□□ -0.62
FAM49B-223	ENST00000522746	LST1	O00453	97 aa		11.17	□□□□□ -0.62
FAM49B-223	ENST00000522746	COX17	Q14061	63 aa		11.17	□□□□□ -0.62
FAM49B-223	ENST00000522746	LINC01556	Q5JQF7	62 aa		11.17	□□□□□ -0.62
FAM49B-223	ENST00000522746	TEN1	Q86WV5	123 aa		11.15	□□□□□ -0.62
FAM49B-223	ENST00000522746	ANKRD29	Q8N6D5	301 aa		11.15	□□□□□ -0.62
FAM49B-223	ENST00000522746	C15orf53	Q8NAA6	179 aa		11.14	□□□□□ -0.63
FAM49B-223	ENST00000522746	TRBV10-2	A0A0K0K1G8	114 aa		11.13	□□□□□ -0.63
FAM49B-223	ENST00000522746	RPL28	P46779	137 aa	Known RBP	11.13	□□□□□ -0.63
FAM49B-223	ENST00000522746	NTN5	Q8WTR8	489 aa	Predicted RBP	11.13	□□□□□ -0.63
FAM49B-223	ENST00000522746	CARD19	Q96LW7	228 aa		11.13	□□□□□ -0.63
FAM49B-223	ENST00000522746	LINC00588	Q9Y4M8	146 aa		11.13	□□□□□ -0.63
FAM49B-223	ENST00000522746	PRR3	P79522	188 aa	Known RBP	11.12	□□□□□ -0.63
FAM49B-223	ENST00000522746	HIGD2B	Q4VC39	106 aa		11.12	□□□□□ -0.63
FAM49B-223	ENST00000522746	SMIM11B	Q8TCY0	68 aa		11.12	□□□□□ -0.63
FAM49B-223	ENST00000522746	DNAH10OS	P0CZ25	163 aa		11.11	□□□□□ -0.63
FAM49B-223	ENST00000522746	OR13C6P	Q8NH95	151 aa		11.11	□□□□□ -0.63
FAM49B-223	ENST00000522746		M0QXV9	152 aa		11.11	□□□□□ -0.63
FAM49B-223	ENST00000522746	FAM218A	Q96MZ4	157 aa		11.1	□□□□□ -0.63
FAM49B-223	ENST00000522746	C1orf43	Q9BWL3	253 aa		11.1	□□□□□ -0.63
FAM49B-223	ENST00000522746	IGKV2D-24	A0A075B6R9	120 aa		11.1	□□□□□ -0.63
FAM49B-223	ENST00000522746		J3QR89	54 aa		11.1	□□□□□ -0.63
FAM49B-223	ENST00000522746		Q8NDZ9	215 aa		11.1	□□□□□ -0.63
FAM49B-223	ENST00000522746	PPDPFL	Q8WWR9	84 aa		11.1	□□□□□ -0.63
FAM49B-223	ENST00000522746	C6orf48	Q9UBA6	75 aa		11.1	□□□□□ -0.63
FAM49B-223	ENST00000522746	PRKDC	P78527	4128 aa	Known RBP	11.09	□□□□□ -0.63
FAM49B-223	ENST00000522746	MEGF8	Q7Z7M0	2845 aa		11.09	□□□□□ -0.63
FAM49B-223	ENST00000522746	C15orf56	Q8N910	161 aa		11.09	□□□□□ -0.63
FAM49B-223	ENST00000522746	CBY1	Q9Y3M2	126 aa		11.09	□□□□□ -0.63
FAM49B-223	ENST00000522746	LINC01600	Q96MT4	127 aa		11.09	□□□□□ -0.63
FAM49B-223	ENST00000522746	B9D2	Q9BPU9	175 aa		11.09	□□□□□ -0.63
FAM49B-223	ENST00000522746		Q9HAA7	133 aa		11.09	□□□□□ -0.63
FAM49B-223	ENST00000522746	ZNF561-AS1	K7EIQ3	104 aa		11.08	□□□□□ -0.64
FAM49B-223	ENST00000522746	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.07	□□□□□ -0.64
FAM49B-223	ENST00000522746	NDUFC2	O95298	119 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 71 ms