RNA–Protein interactions for RNA: ENST00000517402.1

HOXA11-202, Transcript of homeobox A11, humanhuman

TSL 1 (best)

Gene HOXA11, Length 2,137 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-202ENST00000517402 TRBV30A0A0K0K1B3 111 aa13.45□□□□□ -0.26
HOXA11-202ENST00000517402 C2orf82Q6UX34 121 aa13.44□□□□□ -0.26
HOXA11-202ENST00000517402 PFN2P35080 140 aa13.43□□□□□ -0.26
HOXA11-202ENST00000517402 C6orf226Q5I0X4 101 aa13.43□□□□□ -0.26
HOXA11-202ENST00000517402 LINC00158P58513 81 aa13.43□□□□□ -0.26
HOXA11-202ENST00000517402 LYPD5Q6UWN5 251 aa13.43□□□□□ -0.26
HOXA11-202ENST00000517402 VPS25Q9BRG1 176 aa13.43□□□□□ -0.26
HOXA11-202ENST00000517402 CD164L2Q6UWJ8 174 aa13.42□□□□□ -0.26
HOXA11-202ENST00000517402 KPRPQ5T749 579 aaPredicted RBP13.42□□□□□ -0.26
HOXA11-202ENST00000517402 NANOS2P60321 138 aaKnown RBP13.41□□□□□ -0.26
HOXA11-202ENST00000517402 KLK12Q9UKR0 248 aa13.41□□□□□ -0.26
HOXA11-202ENST00000517402 COX7A2LO14548 114 aa13.4□□□□□ -0.26
HOXA11-202ENST00000517402 Q8IZM0 81 aa13.4□□□□□ -0.26
HOXA11-202ENST00000517402 COPS9Q8WXC6 57 aa13.4□□□□□ -0.26
HOXA11-202ENST00000517402 CLEC2BQ92478 149 aa13.4□□□□□ -0.26
HOXA11-202ENST00000517402 C9JAW5 83 aa13.39□□□□□ -0.27
HOXA11-202ENST00000517402 IBA57-AS1B1ANH7 110 aa13.39□□□□□ -0.27
HOXA11-202ENST00000517402 MGAM2Q2M2H8 2515 aa13.39□□□□□ -0.27
HOXA11-202ENST00000517402 FOXI1Q12951 378 aa13.38□□□□□ -0.27
HOXA11-202ENST00000517402 WFDC10BQ8IUB3 73 aa13.38□□□□□ -0.27
HOXA11-202ENST00000517402 MALP21145 153 aa13.37□□□□□ -0.27
HOXA11-202ENST00000517402 ATXN8Q156A1 80 aa13.37□□□□□ -0.27
HOXA11-202ENST00000517402 KIAA0087Q14695 138 aa13.37□□□□□ -0.27
HOXA11-202ENST00000517402 CCL18P55774 89 aa13.36□□□□□ -0.27
HOXA11-202ENST00000517402 SND1-IT1Q9HBX3 110 aa13.36□□□□□ -0.27
HOXA11-202ENST00000517402 HUWE1Q7Z6Z7 4374 aaKnown RBP13.36□□□□□ -0.27
HOXA11-202ENST00000517402 SLC25A20O43772 301 aa13.36□□□□□ -0.27
HOXA11-202ENST00000517402 ENHOQ6UWT2 76 aa13.36□□□□□ -0.27
HOXA11-202ENST00000517402 GAGE12HA6NDE8 117 aa13.35□□□□□ -0.27
HOXA11-202ENST00000517402 COX6CP09669 75 aa13.35□□□□□ -0.27
HOXA11-202ENST00000517402 LINC01620Q4KN68 170 aa13.35□□□□□ -0.27
HOXA11-202ENST00000517402 PRR34Q9NV39 138 aa13.35□□□□□ -0.27
HOXA11-202ENST00000517402 IGKV2-28A0A075B6P5 120 aa13.34□□□□□ -0.27
HOXA11-202ENST00000517402 IGKV2D-28P01615 120 aa13.34□□□□□ -0.27
HOXA11-202ENST00000517402 CKS1BP61024 79 aa13.34□□□□□ -0.27
HOXA11-202ENST00000517402 LINC01561Q8N1V8 128 aa13.34□□□□□ -0.27
HOXA11-202ENST00000517402 LINC00337Q8N6G1 96 aa13.34□□□□□ -0.27
HOXA11-202ENST00000517402 C11orf45Q8TAV5 145 aa13.34□□□□□ -0.27
HOXA11-202ENST00000517402 H3BNG1 76 aa13.34□□□□□ -0.27
HOXA11-202ENST00000517402 CBY1Q9Y3M2 126 aa13.34□□□□□ -0.27
HOXA11-202ENST00000517402 DEFB131BA0A096LNP1 70 aa13.33□□□□□ -0.28
HOXA11-202ENST00000517402 CFAP161Q6P656 301 aa13.33□□□□□ -0.28
HOXA11-202ENST00000517402 ANKRD29Q8N6D5 301 aa13.33□□□□□ -0.28
HOXA11-202ENST00000517402 PPDPFQ9H3Y8 114 aa13.33□□□□□ -0.28
HOXA11-202ENST00000517402 MRAPQ8TCY5 172 aa13.32□□□□□ -0.28
HOXA11-202ENST00000517402 UBE2WQ96B02 151 aa13.32□□□□□ -0.28
HOXA11-202ENST00000517402 LINC00526Q96FQ7 95 aa13.32□□□□□ -0.28
HOXA11-202ENST00000517402 MDFIQ99750 246 aa13.32□□□□□ -0.28
HOXA11-202ENST00000517402 C9orf116Q5BN46 136 aaPredicted RBP13.31□□□□□ -0.28
HOXA11-202ENST00000517402 TEN1Q86WV5 123 aa13.31□□□□□ -0.28
HOXA11-202ENST00000517402 CRPP02741 224 aa13.31□□□□□ -0.28
HOXA11-202ENST00000517402 K7EIL1 84 aa13.3□□□□□ -0.28
HOXA11-202ENST00000517402 LST1O00453 97 aa13.3□□□□□ -0.28
HOXA11-202ENST00000517402 ESRGQ1W209 222 aa13.3□□□□□ -0.28
HOXA11-202ENST00000517402 C6orf223Q8N319 242 aa13.3□□□□□ -0.28
HOXA11-202ENST00000517402 CARD19Q96LW7 228 aa13.29□□□□□ -0.28
HOXA11-202ENST00000517402 DEFB121Q5J5C9 76 aa13.28□□□□□ -0.28
HOXA11-202ENST00000517402 TRAV13-2A0A0B4J235 113 aa13.27□□□□□ -0.28
HOXA11-202ENST00000517402 SPAG11BQ08648 103 aa13.27□□□□□ -0.28
HOXA11-202ENST00000517402 J3QR89 54 aa13.27□□□□□ -0.29
HOXA11-202ENST00000517402 C10orf25Q5T742 122 aa13.27□□□□□ -0.29
HOXA11-202ENST00000517402 TRBV10-2A0A0K0K1G8 114 aa13.26□□□□□ -0.29
HOXA11-202ENST00000517402 CXCL5P42830 114 aa13.26□□□□□ -0.29
HOXA11-202ENST00000517402 SPATA25Q9BR10 227 aa13.26□□□□□ -0.29
HOXA11-202ENST00000517402 UNQ6190/PRO20217Q6UXQ8 127 aa13.25□□□□□ -0.29
HOXA11-202ENST00000517402 PPDPFLQ8WWR9 84 aa13.24□□□□□ -0.29
HOXA11-202ENST00000517402 TM2D3Q9BRN9 247 aa13.24□□□□□ -0.29
HOXA11-202ENST00000517402 KLK5Q9Y337 293 aaPredicted RBP13.24□□□□□ -0.29
HOXA11-202ENST00000517402 NTN5Q8WTR8 489 aaPredicted RBP13.23□□□□□ -0.29
HOXA11-202ENST00000517402 FAM218AQ96MZ4 157 aa13.23□□□□□ -0.29
HOXA11-202ENST00000517402 PRR3P79522 188 aaKnown RBP13.22□□□□□ -0.29
HOXA11-202ENST00000517402 SMIM11BQ8TCY0 68 aa13.22□□□□□ -0.29
HOXA11-202ENST00000517402 M0QXV9 152 aa13.21□□□□□ -0.29
HOXA11-202ENST00000517402 RPL28P46779 137 aaKnown RBP13.21□□□□□ -0.29
HOXA11-202ENST00000517402 DNHD1Q96M86 4753 aa13.21□□□□□ -0.3
HOXA11-202ENST00000517402 OR13C6PQ8NH95 151 aa13.21□□□□□ -0.3
HOXA11-202ENST00000517402 TRAV8-4A0A0B4J246 113 aa13.2□□□□□ -0.3
HOXA11-202ENST00000517402 TEX49A0A1B0GTD5 131 aa13.2□□□□□ -0.3
HOXA11-202ENST00000517402 COX17Q14061 63 aa13.2□□□□□ -0.3
HOXA11-202ENST00000517402 Q8NDZ9 215 aa13.19□□□□□ -0.3
HOXA11-202ENST00000517402 COL7A1Q02388 2944 aa13.19□□□□□ -0.3
HOXA11-202ENST00000517402 KRTAP26-1Q6PEX3 210 aa13.18□□□□□ -0.3
HOXA11-202ENST00000517402 HIGD2BQ4VC39 106 aa13.18□□□□□ -0.3
HOXA11-202ENST00000517402 H3BT86 120 aa13.17□□□□□ -0.3
HOXA11-202ENST00000517402 STAB2Q8WWQ8 2551 aa13.17□□□□□ -0.3
HOXA11-202ENST00000517402 TRAV10A0A0B4J240 114 aa13.16□□□□□ -0.3
HOXA11-202ENST00000517402 LINC01600Q96MT4 127 aa13.16□□□□□ -0.3
HOXA11-202ENST00000517402 LYSTQ99698 3801 aa13.16□□□□□ -0.3
HOXA11-202ENST00000517402 LINC01556Q5JQF7 62 aa13.16□□□□□ -0.3
HOXA11-202ENST00000517402 PCP4P48539 62 aa13.15□□□□□ -0.3
HOXA11-202ENST00000517402 C6orf48Q9UBA6 75 aa13.14□□□□□ -0.31
HOXA11-202ENST00000517402 DNAH9Q9NYC9 4486 aa13.14□□□□□ -0.31
HOXA11-202ENST00000517402 A0A087WYN8 130 aa13.13□□□□□ -0.31
HOXA11-202ENST00000517402 C21orf62-AS1Q17RA5 79 aa13.13□□□□□ -0.31
HOXA11-202ENST00000517402 NCR3O14931 201 aa13.13□□□□□ -0.31
HOXA11-202ENST00000517402 Q9HAA7 133 aa13.13□□□□□ -0.31
HOXA11-202ENST00000517402 TRACP01848 142 aa13.12□□□□□ -0.31
HOXA11-202ENST00000517402 C15orf56Q8N910 161 aa13.12□□□□□ -0.31
HOXA11-202ENST00000517402 C1orf43Q9BWL3 253 aa13.12□□□□□ -0.31
HOXA11-202ENST00000517402 LINC00588Q9Y4M8 146 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms