RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 TTTY13Q9BZ97 58 aa4.56□□□□□ -1.68
TRAPPC11-206ENST00000509857 NOP10Q9NPE3 64 aaKnown RBP4.56□□□□□ -1.68
TRAPPC11-206ENST00000509857 FN1P02751 2386 aaKnown RBP4.55□□□□□ -1.68
TRAPPC11-206ENST00000509857 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC11-206ENST00000509857 A0A0J9YXV3 536 aa4.55□□□□□ -1.68
TRAPPC11-206ENST00000509857 H3BUT2 72 aa4.55□□□□□ -1.68
TRAPPC11-206ENST00000509857 IFITM1P13164 125 aa4.55□□□□□ -1.68
TRAPPC11-206ENST00000509857 ZFAND6Q6FIF0 208 aa4.55□□□□□ -1.68
TRAPPC11-206ENST00000509857 SFTA2Q6UW10 78 aa4.55□□□□□ -1.68
TRAPPC11-206ENST00000509857 TMEM243Q9BU79 118 aa4.55□□□□□ -1.68
TRAPPC11-206ENST00000509857 SPANXDQ9BXN6 97 aa4.55□□□□□ -1.68
TRAPPC11-206ENST00000509857 GEMIN7Q9H840 131 aaKnown RBP4.55□□□□□ -1.68
TRAPPC11-206ENST00000509857 NHP2Q9NX24 153 aaKnown RBP4.55□□□□□ -1.68
TRAPPC11-206ENST00000509857 SPANXCQ9NY87 97 aa4.55□□□□□ -1.68
TRAPPC11-206ENST00000509857 A0A0B4J2C4 111 aa4.54□□□□□ -1.68
TRAPPC11-206ENST00000509857 TRGV4A0A0C4DH28 118 aa4.54□□□□□ -1.68
TRAPPC11-206ENST00000509857 IGLL5B9A064 214 aa4.54□□□□□ -1.68
TRAPPC11-206ENST00000509857 IGHV3-30P01768 117 aa4.54□□□□□ -1.68
TRAPPC11-206ENST00000509857 IGHV3-30-3P0DP02 117 aa4.54□□□□□ -1.68
TRAPPC11-206ENST00000509857 IGHV3-30-5P0DP03 117 aa4.54□□□□□ -1.68
TRAPPC11-206ENST00000509857 Q6ZUT4 128 aa4.54□□□□□ -1.68
TRAPPC11-206ENST00000509857 LINC01561Q8N1V8 128 aa4.54□□□□□ -1.68
TRAPPC11-206ENST00000509857 TMEM101Q96IK0 257 aa4.54□□□□□ -1.68
TRAPPC11-206ENST00000509857 SMR3AQ99954 134 aa4.54□□□□□ -1.68
TRAPPC11-206ENST00000509857 CDC42SE2Q9NRR3 84 aa4.54□□□□□ -1.68
TRAPPC11-206ENST00000509857 SPCS1Q9Y6A9 102 aa4.54□□□□□ -1.68
TRAPPC11-206ENST00000509857 ANK3Q12955 4377 aaKnown RBP4.54□□□□□ -1.68
TRAPPC11-206ENST00000509857 SETD2Q9BYW2 2564 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC11-206ENST00000509857 TRBV20-1A0A075B6N2 111 aa4.53□□□□□ -1.68
TRAPPC11-206ENST00000509857 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC11-206ENST00000509857 TRAV26-1A0A087WT03 109 aa4.53□□□□□ -1.68
TRAPPC11-206ENST00000509857 IGKV2-29A2NJV5 120 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC11-206ENST00000509857 F8W1H4 67 aa4.53□□□□□ -1.68
TRAPPC11-206ENST00000509857 K7ERU9 68 aa4.53□□□□□ -1.68
TRAPPC11-206ENST00000509857 UBE2L6O14933 153 aa4.53□□□□□ -1.68
TRAPPC11-206ENST00000509857 NDUFA1O15239 70 aa4.53□□□□□ -1.68
TRAPPC11-206ENST00000509857 PRM2P04554 102 aa4.53□□□□□ -1.68
TRAPPC11-206ENST00000509857 MIFP14174 115 aa4.53□□□□□ -1.68
TRAPPC11-206ENST00000509857 TCTAP57738 103 aa4.53□□□□□ -1.68
TRAPPC11-206ENST00000509857 TSPEAR-AS2P59090 65 aa4.53□□□□□ -1.68
TRAPPC11-206ENST00000509857 PRO0255Q9UI72 69 aa4.53□□□□□ -1.68
TRAPPC11-206ENST00000509857 NSD1Q96L73 2696 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC11-206ENST00000509857 TRBV6-8A0A0A6YYG3 113 aa4.52□□□□□ -1.69
TRAPPC11-206ENST00000509857 EMP1P54849 157 aa4.52□□□□□ -1.69
TRAPPC11-206ENST00000509857 CIRBPQ14011 172 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-206ENST00000509857 NTM-AS1Q6ZSK4 140 aa4.52□□□□□ -1.69
TRAPPC11-206ENST00000509857 C10orf126Q8N4M7 172 aa4.52□□□□□ -1.69
TRAPPC11-206ENST00000509857 WFDC10AQ9H1F0 79 aa4.52□□□□□ -1.69
TRAPPC11-206ENST00000509857 NDUFA12Q9UI09 145 aa4.52□□□□□ -1.69
TRAPPC11-206ENST00000509857 JMJD1CQ15652 2540 aa4.52□□□□□ -1.69
TRAPPC11-206ENST00000509857 SETXQ7Z333 2677 aaKnown RBP4.51□□□□□ -1.69
TRAPPC11-206ENST00000509857 NF1P21359 2839 aa4.51□□□□□ -1.69
TRAPPC11-206ENST00000509857 M0QXV9 152 aa4.51□□□□□ -1.69
TRAPPC11-206ENST00000509857 MIAQ16674 131 aa4.51□□□□□ -1.69
TRAPPC11-206ENST00000509857 KRTAP13-3Q3SY46 172 aa4.51□□□□□ -1.69
TRAPPC11-206ENST00000509857 LINC01620Q4KN68 170 aa4.51□□□□□ -1.69
TRAPPC11-206ENST00000509857 RAB37Q96AX2 223 aa4.51□□□□□ -1.69
TRAPPC11-206ENST00000509857 PRO1854Q9UHT4 67 aa4.51□□□□□ -1.69
TRAPPC11-206ENST00000509857 ATP6V0E2Q8NHE4 81 aa4.5□□□□□ -1.69
TRAPPC11-206ENST00000509857 CDKN2A-AS1Q9UH64 79 aa4.5□□□□□ -1.69
TRAPPC11-206ENST00000509857 HECTD1Q9ULT8 2610 aa4.5□□□□□ -1.69
TRAPPC11-206ENST00000509857 F5H768 121 aa4.49□□□□□ -1.69
TRAPPC11-206ENST00000509857 H3BNG1 76 aa4.49□□□□□ -1.69
TRAPPC11-206ENST00000509857 J3QR89 54 aa4.49□□□□□ -1.69
TRAPPC11-206ENST00000509857 K7ERJ3 54 aa4.49□□□□□ -1.69
TRAPPC11-206ENST00000509857 OCIAD2Q56VL3 154 aa4.49□□□□□ -1.69
TRAPPC11-206ENST00000509857 CEMP1Q6PRD7 247 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC11-206ENST00000509857 LINC01600Q96MT4 127 aa4.49□□□□□ -1.69
TRAPPC11-206ENST00000509857 CBY1Q9Y3M2 126 aa4.49□□□□□ -1.69
TRAPPC11-206ENST00000509857 TRAV8-3A0A0A6YYJ7 113 aa4.48□□□□□ -1.69
TRAPPC11-206ENST00000509857 TRBV30A0A0K0K1B3 111 aa4.48□□□□□ -1.69
TRAPPC11-206ENST00000509857 TSPAN13O95857 204 aa4.48□□□□□ -1.69
TRAPPC11-206ENST00000509857 IGHV3-33P01772 117 aa4.48□□□□□ -1.69
TRAPPC11-206ENST00000509857 ATP5G1P05496 136 aa4.48□□□□□ -1.69
TRAPPC11-206ENST00000509857 SPINK8P0C7L1 97 aa4.48□□□□□ -1.69
TRAPPC11-206ENST00000509857 SPART-AS1P0CW21 52 aa4.48□□□□□ -1.69
TRAPPC11-206ENST00000509857 EGFEM1PQ0D2K5 195 aa4.48□□□□□ -1.69
TRAPPC11-206ENST00000509857 KRTAP5-4Q6L8H1 288 aa4.48□□□□□ -1.69
TRAPPC11-206ENST00000509857 Q8NAQ8 132 aa4.48□□□□□ -1.69
TRAPPC11-206ENST00000509857 MUC7Q8TAX7 377 aa4.48□□□□□ -1.69
TRAPPC11-206ENST00000509857 DEFB104AQ8WTQ1 72 aa4.48□□□□□ -1.69
TRAPPC11-206ENST00000509857 ZNF625Q96I27 306 aaPredicted RBP4.48□□□□□ -1.69
TRAPPC11-206ENST00000509857 KRTAP4-4Q9BYR3 166 aa4.48□□□□□ -1.69
TRAPPC11-206ENST00000509857 ERG28Q9UKR5 140 aa4.48□□□□□ -1.69
TRAPPC11-206ENST00000509857 F8P00451 2351 aa4.47□□□□□ -1.69
TRAPPC11-206ENST00000509857 IGHV3OR16-9A0A0B4J2B5 98 aa4.47□□□□□ -1.69
TRAPPC11-206ENST00000509857 APOMO95445 188 aa4.47□□□□□ -1.69
TRAPPC11-206ENST00000509857 DAD1P61803 113 aa4.47□□□□□ -1.69
TRAPPC11-206ENST00000509857 MRPL23Q16540 153 aaKnown RBP4.47□□□□□ -1.69
TRAPPC11-206ENST00000509857 FAM222AQ5U5X8 452 aa4.47□□□□□ -1.69
TRAPPC11-206ENST00000509857 MUSTN1Q8IVN3 82 aa4.47□□□□□ -1.69
TRAPPC11-206ENST00000509857 LINC00167Q96N53 147 aa4.47□□□□□ -1.69
TRAPPC11-206ENST00000509857 GCN1Q92616 2671 aaKnown RBP4.47□□□□□ -1.69
TRAPPC11-206ENST00000509857 TRAV13-1A0A0B4J241 112 aa4.46□□□□□ -1.7
TRAPPC11-206ENST00000509857 H3BMG7 143 aa4.46□□□□□ -1.7
TRAPPC11-206ENST00000509857 COX6CP09669 75 aa4.46□□□□□ -1.7
TRAPPC11-206ENST00000509857 DEFB130BP0DP73 79 aa4.46□□□□□ -1.7
TRAPPC11-206ENST00000509857 DEFB130AP0DP74 79 aa4.46□□□□□ -1.7
TRAPPC11-206ENST00000509857 CXCL5P42830 114 aa4.46□□□□□ -1.7
TRAPPC11-206ENST00000509857 RBX1P62877 108 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms