RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 SRSF9Q13242 221 aaKnown RBP eCLIP9.12□□□□□ -0.95
UBE2D3-228ENST00000508974 PAPPA-AS1Q5QFB9 102 aa9.12□□□□□ -0.95
UBE2D3-228ENST00000508974 REG3GQ6UW15 175 aa9.12□□□□□ -0.95
UBE2D3-228ENST00000508974 LINC01600Q96MT4 127 aa9.12□□□□□ -0.95
UBE2D3-228ENST00000508974 TIMM17AQ99595 171 aa9.12□□□□□ -0.95
UBE2D3-228ENST00000508974 GEMIN7Q9H840 131 aaKnown RBP9.12□□□□□ -0.95
UBE2D3-228ENST00000508974 CDKN2A-AS1Q9UH64 79 aa9.12□□□□□ -0.95
UBE2D3-228ENST00000508974 TNXBP22105 4242 aa9.11□□□□□ -0.95
UBE2D3-228ENST00000508974 CKS1BP61024 79 aa9.11□□□□□ -0.95
UBE2D3-228ENST00000508974 HERVK_113P63121 156 aa9.11□□□□□ -0.95
UBE2D3-228ENST00000508974 FABP9Q0Z7S8 132 aa9.11□□□□□ -0.95
UBE2D3-228ENST00000508974 C6orf226Q5I0X4 101 aa9.11□□□□□ -0.95
UBE2D3-228ENST00000508974 LINC01561Q8N1V8 128 aa9.11□□□□□ -0.95
UBE2D3-228ENST00000508974 ERASQ7Z444 233 aa9.1□□□□□ -0.95
UBE2D3-228ENST00000508974 FAM19A3Q7Z5A8 133 aa9.1□□□□□ -0.95
UBE2D3-228ENST00000508974 KRTAP11-1Q8IUC1 163 aa9.1□□□□□ -0.95
UBE2D3-228ENST00000508974 LINC00469Q8N7U9 141 aa9.1□□□□□ -0.95
UBE2D3-228ENST00000508974 NDUFC2-KCTD14E9PQ53 114 aa9.09□□□□□ -0.95
UBE2D3-228ENST00000508974 M0QXV9 152 aa9.09□□□□□ -0.95
UBE2D3-228ENST00000508974 RHEBQ15382 184 aa9.09□□□□□ -0.95
UBE2D3-228ENST00000508974 C9orf129Q5T035 196 aaKnown RBP9.09□□□□□ -0.95
UBE2D3-228ENST00000508974 C10orf91Q5T1B1 145 aa9.09□□□□□ -0.95
UBE2D3-228ENST00000508974 FA2HQ7L5A8 372 aa9.09□□□□□ -0.95
UBE2D3-228ENST00000508974 KRTAP7-1Q8IUC3 87 aa9.09□□□□□ -0.95
UBE2D3-228ENST00000508974 Q8IZM0 81 aa9.09□□□□□ -0.95
UBE2D3-228ENST00000508974 SMCO4Q9NRQ5 59 aa9.09□□□□□ -0.95
UBE2D3-228ENST00000508974 CARHSP1Q9Y2V2 147 aaKnown RBP9.09□□□□□ -0.95
UBE2D3-228ENST00000508974 SEC11AP67812 179 aa9.08□□□□□ -0.96
UBE2D3-228ENST00000508974 UBE2BP63146 152 aa9.07□□□□□ -0.96
UBE2D3-228ENST00000508974 COX19Q49B96 90 aa9.07□□□□□ -0.96
UBE2D3-228ENST00000508974 LINC01546A6NGU7 62 aa9.05□□□□□ -0.96
UBE2D3-228ENST00000508974 SMIM1B2RUZ4 78 aa9.05□□□□□ -0.96
UBE2D3-228ENST00000508974 APOC3P02656 99 aa9.05□□□□□ -0.96
UBE2D3-228ENST00000508974 IGLV7-43P04211 117 aa9.05□□□□□ -0.96
UBE2D3-228ENST00000508974 CST9LQ9H4G1 147 aa9.05□□□□□ -0.96
UBE2D3-228ENST00000508974 XAGE1AQ9HD64 81 aa9.05□□□□□ -0.96
UBE2D3-228ENST00000508974 UBR4Q5T4S7 5183 aa9.04□□□□□ -0.96
UBE2D3-228ENST00000508974 TINCRA0A1B0GVN0 87 aa9.04□□□□□ -0.96
UBE2D3-228ENST00000508974 F8VRH5 84 aa9.04□□□□□ -0.96
UBE2D3-228ENST00000508974 SPINK8P0C7L1 97 aa9.04□□□□□ -0.96
UBE2D3-228ENST00000508974 TRAPPC1Q9Y5R8 145 aa9.04□□□□□ -0.96
UBE2D3-228ENST00000508974 NDUFA6P56556 154 aa9.03□□□□□ -0.96
UBE2D3-228ENST00000508974 KRTAP10-8P60410 259 aa9.03□□□□□ -0.96
UBE2D3-228ENST00000508974 PMVKQ15126 192 aa9.03□□□□□ -0.96
UBE2D3-228ENST00000508974 COX7B2Q8TF08 81 aa9.03□□□□□ -0.96
UBE2D3-228ENST00000508974 LINC01549A6NIU2 74 aa9.02□□□□□ -0.97
UBE2D3-228ENST00000508974 PMCHL1Q16048 86 aa9.02□□□□□ -0.97
UBE2D3-228ENST00000508974 KRTAP4-8Q9BYQ9 185 aa9.02□□□□□ -0.97
UBE2D3-228ENST00000508974 PDZD11Q5EBL8 140 aa9.01□□□□□ -0.97
UBE2D3-228ENST00000508974 C18orf32Q8TCD1 76 aa9.01□□□□□ -0.97
UBE2D3-228ENST00000508974 DIRC1Q969H9 104 aa9.01□□□□□ -0.97
UBE2D3-228ENST00000508974 URB1-AS1Q96HZ7 61 aa9.01□□□□□ -0.97
UBE2D3-228ENST00000508974 IGLV5-45A0A087WSX0 123 aa9□□□□□ -0.97
UBE2D3-228ENST00000508974 A0A096LNJ9 63 aa9□□□□□ -0.97
UBE2D3-228ENST00000508974 CXCL5P42830 114 aa9□□□□□ -0.97
UBE2D3-228ENST00000508974 RAB5BP61020 215 aa9□□□□□ -0.97
UBE2D3-228ENST00000508974 TMEM238LA0A1B0GVL6 79 aa8.99□□□□□ -0.97
UBE2D3-228ENST00000508974 H0Y9J4 135 aa8.99□□□□□ -0.97
UBE2D3-228ENST00000508974 SNAPINO95295 136 aa8.99□□□□□ -0.97
UBE2D3-228ENST00000508974 LINC00614P0C842 121 aa8.99□□□□□ -0.97
UBE2D3-228ENST00000508974 NDUFA5Q16718 116 aa8.99□□□□□ -0.97
UBE2D3-228ENST00000508974 C22orf24Q9Y442 160 aa8.99□□□□□ -0.97
UBE2D3-228ENST00000508974 SVBPQ8N300 66 aa8.98□□□□□ -0.97
UBE2D3-228ENST00000508974 PRR26Q8N8Z3 221 aa8.98□□□□□ -0.97
UBE2D3-228ENST00000508974 H3BRM9 83 aa8.97□□□□□ -0.97
UBE2D3-228ENST00000508974 HBDP02042 147 aa8.97□□□□□ -0.97
UBE2D3-228ENST00000508974 EIF4EBP3O60516 100 aaPredicted RBP8.96□□□□□ -0.98
UBE2D3-228ENST00000508974 IGLC3P0DOY3 106 aa8.96□□□□□ -0.98
UBE2D3-228ENST00000508974 ZNF22P17026 224 aaPredicted RBP8.95□□□□□ -0.98
UBE2D3-228ENST00000508974 GAGE10A6NGK3 116 aa8.94□□□□□ -0.98
UBE2D3-228ENST00000508974 ATP5LO75964 103 aa8.94□□□□□ -0.98
UBE2D3-228ENST00000508974 LBHQ53QV2 105 aaPredicted RBP8.94□□□□□ -0.98
UBE2D3-228ENST00000508974 MRPL55Q7Z7F7 128 aaKnown RBP8.94□□□□□ -0.98
UBE2D3-228ENST00000508974 RPL37AP8A6NKH3 93 aa8.93□□□□□ -0.98
UBE2D3-228ENST00000508974 PFN2P35080 140 aa8.93□□□□□ -0.98
UBE2D3-228ENST00000508974 BAGE3Q86Y29 109 aa8.93□□□□□ -0.98
UBE2D3-228ENST00000508974 IGLV5-39A0A0G2JS06 123 aa8.91□□□□□ -0.98
UBE2D3-228ENST00000508974 C11orf86A6NJI1 115 aa8.91□□□□□ -0.98
UBE2D3-228ENST00000508974 KRTAP1-4P0C5Y4 121 aa8.91□□□□□ -0.98
UBE2D3-228ENST00000508974 TMEM170BQ5T4T1 132 aa8.91□□□□□ -0.98
UBE2D3-228ENST00000508974 CBLN2Q8IUK8 224 aa8.91□□□□□ -0.98
UBE2D3-228ENST00000508974 ZNF625Q96I27 306 aaPredicted RBP8.91□□□□□ -0.98
UBE2D3-228ENST00000508974 LINC00167Q96N53 147 aa8.91□□□□□ -0.98
UBE2D3-228ENST00000508974 YPEL4Q96NS1 127 aa8.91□□□□□ -0.98
UBE2D3-228ENST00000508974 NUPR1O60356 82 aa8.9□□□□□ -0.98
UBE2D3-228ENST00000508974 ZNF861PO60384 105 aa8.9□□□□□ -0.98
UBE2D3-228ENST00000508974 SCO1O75880 301 aa8.9□□□□□ -0.98
UBE2D3-228ENST00000508974 NKAPP1Q8N9T2 125 aa8.9□□□□□ -0.98
UBE2D3-228ENST00000508974 TP73-AS1Q9UF72 201 aa8.9□□□□□ -0.98
UBE2D3-228ENST00000508974 LRP2P98164 4655 aa8.89□□□□□ -0.99
UBE2D3-228ENST00000508974 CHTOPQ9Y3Y2 248 aaKnown RBP8.89□□□□□ -0.99
UBE2D3-228ENST00000508974 ERG28Q9UKR5 140 aa8.88□□□□□ -0.99
UBE2D3-228ENST00000508974 IGLV1-50A0A075B6I6 118 aa8.87□□□□□ -0.99
UBE2D3-228ENST00000508974 BCE1O60756 84 aa8.87□□□□□ -0.99
UBE2D3-228ENST00000508974 KRTAP9-2Q9BYQ4 174 aa8.87□□□□□ -0.99
UBE2D3-228ENST00000508974 IGKV2-28A0A075B6P5 120 aa8.86□□□□□ -0.99
UBE2D3-228ENST00000508974 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.86□□□□□ -0.99
UBE2D3-228ENST00000508974 IGKV2D-28P01615 120 aa8.86□□□□□ -0.99
UBE2D3-228ENST00000508974 CHCHD1Q96BP2 118 aaKnown RBP8.86□□□□□ -0.99
UBE2D3-228ENST00000508974 IGLV5-37A0A075B6J1 123 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 192.3 ms