RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 C6orf48Q9UBA6 75 aa10.2□□□□□ -0.78
TRAPPC3-207ENST00000497251 FAM19A3Q7Z5A8 133 aa10.19□□□□□ -0.78
TRAPPC3-207ENST00000497251 FABP9Q0Z7S8 132 aa10.18□□□□□ -0.78
TRAPPC3-207ENST00000497251 C10orf25Q5T742 122 aa10.18□□□□□ -0.78
TRAPPC3-207ENST00000497251 NDUFC2-KCTD14E9PQ53 114 aa10.17□□□□□ -0.78
TRAPPC3-207ENST00000497251 SEC11AP67812 179 aa10.17□□□□□ -0.78
TRAPPC3-207ENST00000497251 KIAA0087Q14695 138 aa10.17□□□□□ -0.78
TRAPPC3-207ENST00000497251 GAGE2EQ4V326 116 aa10.17□□□□□ -0.78
TRAPPC3-207ENST00000497251 ERASQ7Z444 233 aa10.17□□□□□ -0.78
TRAPPC3-207ENST00000497251 PACRGQ96M98 296 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC3-207ENST00000497251 GAGE2DQ9UEU5 116 aa10.17□□□□□ -0.78
TRAPPC3-207ENST00000497251 FAM168BA1KXE4 195 aa10.16□□□□□ -0.78
TRAPPC3-207ENST00000497251 M0QXV9 152 aa10.16□□□□□ -0.78
TRAPPC3-207ENST00000497251 UBE2BP63146 152 aa10.16□□□□□ -0.78
TRAPPC3-207ENST00000497251 FAM19A5Q7Z5A7 132 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC3-207ENST00000497251 ZC2HC1BQ5TFG8 222 aa10.15□□□□□ -0.78
TRAPPC3-207ENST00000497251 FA2HQ7L5A8 372 aa10.15□□□□□ -0.78
TRAPPC3-207ENST00000497251 SCGB3A1Q96QR1 104 aa10.15□□□□□ -0.78
TRAPPC3-207ENST00000497251 KRTAP1-4P0C5Y4 121 aa10.14□□□□□ -0.79
TRAPPC3-207ENST00000497251 HERVK_113P63121 156 aa10.14□□□□□ -0.79
TRAPPC3-207ENST00000497251 SMCO4Q9NRQ5 59 aa10.14□□□□□ -0.79
TRAPPC3-207ENST00000497251 TRAPPC1Q9Y5R8 145 aa10.14□□□□□ -0.79
TRAPPC3-207ENST00000497251 LCE2DQ5TA82 110 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC3-207ENST00000497251 KRTAP11-1Q8IUC1 163 aa10.13□□□□□ -0.79
TRAPPC3-207ENST00000497251 NUPR1O60356 82 aa10.11□□□□□ -0.79
TRAPPC3-207ENST00000497251 ZNF861PO60384 105 aa10.11□□□□□ -0.79
TRAPPC3-207ENST00000497251 LBHQ53QV2 105 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC3-207ENST00000497251 KRTAP7-1Q8IUC3 87 aa10.11□□□□□ -0.79
TRAPPC3-207ENST00000497251 GEMIN7Q9H840 131 aaKnown RBP10.11□□□□□ -0.79
TRAPPC3-207ENST00000497251 PRSS2P07478 247 aa10.1□□□□□ -0.79
TRAPPC3-207ENST00000497251 C18orf32Q8TCD1 76 aa10.1□□□□□ -0.79
TRAPPC3-207ENST00000497251 LPAP08519 4548 aa10.09□□□□□ -0.79
TRAPPC3-207ENST00000497251 A0A0U1RQV1 116 aa10.09□□□□□ -0.79
TRAPPC3-207ENST00000497251 CKS1BP61024 79 aa10.09□□□□□ -0.79
TRAPPC3-207ENST00000497251 Q8IZM0 81 aa10.09□□□□□ -0.79
TRAPPC3-207ENST00000497251 CDKN2A-AS1Q9UH64 79 aa10.09□□□□□ -0.79
TRAPPC3-207ENST00000497251 TINCRA0A1B0GVN0 87 aa10.08□□□□□ -0.8
TRAPPC3-207ENST00000497251 LINC00614P0C842 121 aa10.08□□□□□ -0.8
TRAPPC3-207ENST00000497251 C9orf129Q5T035 196 aaKnown RBP10.08□□□□□ -0.8
TRAPPC3-207ENST00000497251 C2orf82Q6UX34 121 aa10.08□□□□□ -0.8
TRAPPC3-207ENST00000497251 YPEL4Q96NS1 127 aa10.08□□□□□ -0.8
TRAPPC3-207ENST00000497251 RAB5BP61020 215 aa10.07□□□□□ -0.8
TRAPPC3-207ENST00000497251 PMVKQ15126 192 aa10.07□□□□□ -0.8
TRAPPC3-207ENST00000497251 C6orf226Q5I0X4 101 aa10.07□□□□□ -0.8
TRAPPC3-207ENST00000497251 URB1-AS1Q96HZ7 61 aa10.07□□□□□ -0.8
TRAPPC3-207ENST00000497251 CST9LQ9H4G1 147 aa10.07□□□□□ -0.8
TRAPPC3-207ENST00000497251 TP73-AS1Q9UF72 201 aa10.07□□□□□ -0.8
TRAPPC3-207ENST00000497251 IGLV5-45A0A087WSX0 123 aa10.06□□□□□ -0.8
TRAPPC3-207ENST00000497251 PRR4Q16378 134 aa10.06□□□□□ -0.8
TRAPPC3-207ENST00000497251 A0A096LNJ9 63 aa10.05□□□□□ -0.8
TRAPPC3-207ENST00000497251 HBDP02042 147 aa10.05□□□□□ -0.8
TRAPPC3-207ENST00000497251 LINC00469Q8N7U9 141 aa10.05□□□□□ -0.8
TRAPPC3-207ENST00000497251 TOMM7Q9P0U1 55 aa10.05□□□□□ -0.8
TRAPPC3-207ENST00000497251 CXCL5P42830 114 aa10.04□□□□□ -0.8
TRAPPC3-207ENST00000497251 C22orf24Q9Y442 160 aa10.04□□□□□ -0.8
TRAPPC3-207ENST00000497251 SMIM1B2RUZ4 78 aa10.03□□□□□ -0.8
TRAPPC3-207ENST00000497251 RPL28P46779 137 aaKnown RBP10.03□□□□□ -0.8
TRAPPC3-207ENST00000497251 PDZD11Q5EBL8 140 aa10.03□□□□□ -0.8
TRAPPC3-207ENST00000497251 F8VRH5 84 aa10.02□□□□□ -0.81
TRAPPC3-207ENST00000497251 H3BRM9 83 aa10□□□□□ -0.81
TRAPPC3-207ENST00000497251 ATP5LO75964 103 aa10□□□□□ -0.81
TRAPPC3-207ENST00000497251 IGLC3P0DOY3 106 aa10□□□□□ -0.81
TRAPPC3-207ENST00000497251 MRPL55Q7Z7F7 128 aaKnown RBP10□□□□□ -0.81
TRAPPC3-207ENST00000497251 CBLN2Q8IUK8 224 aa10□□□□□ -0.81
TRAPPC3-207ENST00000497251 CHCHD1Q96BP2 118 aaKnown RBP10□□□□□ -0.81
TRAPPC3-207ENST00000497251 BCE1O60756 84 aa9.99□□□□□ -0.81
TRAPPC3-207ENST00000497251 CRYGAP11844 174 aa9.99□□□□□ -0.81
TRAPPC3-207ENST00000497251 PMCHL1Q16048 86 aa9.99□□□□□ -0.81
TRAPPC3-207ENST00000497251 COX7B2Q8TF08 81 aa9.99□□□□□ -0.81
TRAPPC3-207ENST00000497251 SLC7A5P1Q8MH63 180 aa9.98□□□□□ -0.81
TRAPPC3-207ENST00000497251 XAGE1AQ9HD64 81 aa9.98□□□□□ -0.81
TRAPPC3-207ENST00000497251 MUC2Q02817 5179 aa9.98□□□□□ -0.81
TRAPPC3-207ENST00000497251 SPINK8P0C7L1 97 aa9.97□□□□□ -0.81
TRAPPC3-207ENST00000497251 NDUFA6P56556 154 aa9.97□□□□□ -0.81
TRAPPC3-207ENST00000497251 CTAG1AP78358 180 aa9.97□□□□□ -0.81
TRAPPC3-207ENST00000497251 TYMSOSQ8TAI1 123 aa9.95□□□□□ -0.82
TRAPPC3-207ENST00000497251 IGLV5-39A0A0G2JS06 123 aa9.94□□□□□ -0.82
TRAPPC3-207ENST00000497251 ZNF22P17026 224 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC3-207ENST00000497251 BAGE3Q86Y29 109 aa9.94□□□□□ -0.82
TRAPPC3-207ENST00000497251 IGLV5-37A0A075B6J1 123 aa9.92□□□□□ -0.82
TRAPPC3-207ENST00000497251 TSPAN13O95857 204 aa9.92□□□□□ -0.82
TRAPPC3-207ENST00000497251 TRGC2P03986 189 aa9.92□□□□□ -0.82
TRAPPC3-207ENST00000497251 FAM229BQ4G0N7 80 aa9.92□□□□□ -0.82
TRAPPC3-207ENST00000497251 A0A087X002 238 aa9.91□□□□□ -0.82
TRAPPC3-207ENST00000497251 TRAV12-1A0A0B4J245 112 aa9.91□□□□□ -0.82
TRAPPC3-207ENST00000497251 C11orf86A6NJI1 115 aa9.91□□□□□ -0.82
TRAPPC3-207ENST00000497251 HSBP1O75506 76 aa9.91□□□□□ -0.82
TRAPPC3-207ENST00000497251 IFI27L1Q96BM0 104 aa9.91□□□□□ -0.82
TRAPPC3-207ENST00000497251 LINC00167Q96N53 147 aa9.91□□□□□ -0.82
TRAPPC3-207ENST00000497251 CHTOPQ9Y3Y2 248 aaKnown RBP9.9□□□□□ -0.82
TRAPPC3-207ENST00000497251 SFTA2Q6UW10 78 aa9.89□□□□□ -0.83
TRAPPC3-207ENST00000497251 COLCA2A8K830 154 aa9.88□□□□□ -0.83
TRAPPC3-207ENST00000497251 TMEM170BQ5T4T1 132 aa9.88□□□□□ -0.83
TRAPPC3-207ENST00000497251 NKAPP1Q8N9T2 125 aa9.88□□□□□ -0.83
TRAPPC3-207ENST00000497251 UBE2AP49459 152 aa9.87□□□□□ -0.83
TRAPPC3-207ENST00000497251 KRTAP13-1Q8IUC0 172 aa9.87□□□□□ -0.83
TRAPPC3-207ENST00000497251 RPL37AP8A6NKH3 93 aa9.86□□□□□ -0.83
TRAPPC3-207ENST00000497251 FAM19A2Q8N3H0 131 aa9.86□□□□□ -0.83
TRAPPC3-207ENST00000497251 SERF1AO75920 110 aa9.85□□□□□ -0.83
TRAPPC3-207ENST00000497251 COX17Q14061 63 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms