RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 IGIPA6NJ69 53 aa10.32□□□□□ -0.76
APOBEC3A-204ENST00000495988 M0QXV9 152 aa10.32□□□□□ -0.76
APOBEC3A-204ENST00000495988 PRSS2P07478 247 aa10.32□□□□□ -0.76
APOBEC3A-204ENST00000495988 KRTAP7-1Q8IUC3 87 aa10.32□□□□□ -0.76
APOBEC3A-204ENST00000495988 MRPL18Q9H0U6 180 aaKnown RBP10.32□□□□□ -0.76
APOBEC3A-204ENST00000495988 SMCO4Q9NRQ5 59 aa10.32□□□□□ -0.76
APOBEC3A-204ENST00000495988 UBE2BP63146 152 aa10.31□□□□□ -0.76
APOBEC3A-204ENST00000495988 FABP9Q0Z7S8 132 aa10.31□□□□□ -0.76
APOBEC3A-204ENST00000495988 CBLN2Q8IUK8 224 aa10.31□□□□□ -0.76
APOBEC3A-204ENST00000495988 CKS1BP61024 79 aa10.3□□□□□ -0.76
APOBEC3A-204ENST00000495988 C9orf129Q5T035 196 aaKnown RBP10.3□□□□□ -0.76
APOBEC3A-204ENST00000495988 FAM19A3Q7Z5A8 133 aa10.3□□□□□ -0.76
APOBEC3A-204ENST00000495988 H0Y9J4 135 aa10.29□□□□□ -0.76
APOBEC3A-204ENST00000495988 G0S2P27469 103 aa10.29□□□□□ -0.76
APOBEC3A-204ENST00000495988 HERVK_113P63121 156 aa10.29□□□□□ -0.76
APOBEC3A-204ENST00000495988 C6orf226Q5I0X4 101 aa10.29□□□□□ -0.76
APOBEC3A-204ENST00000495988 PAPPA-AS1Q5QFB9 102 aa10.29□□□□□ -0.76
APOBEC3A-204ENST00000495988 Q8IZM0 81 aa10.29□□□□□ -0.76
APOBEC3A-204ENST00000495988 YPEL4Q96NS1 127 aa10.29□□□□□ -0.76
APOBEC3A-204ENST00000495988 TRAPPC1Q9Y5R8 145 aa10.29□□□□□ -0.76
APOBEC3A-204ENST00000495988 SEC11AP67812 179 aa10.28□□□□□ -0.76
APOBEC3A-204ENST00000495988 PRR26Q8N8Z3 221 aa10.28□□□□□ -0.76
APOBEC3A-204ENST00000495988 TIMM17AQ99595 171 aa10.28□□□□□ -0.76
APOBEC3A-204ENST00000495988 ALKBH7Q9BT30 221 aaPredicted RBP10.28□□□□□ -0.76
APOBEC3A-204ENST00000495988 TOMM6Q96B49 74 aa10.27□□□□□ -0.77
APOBEC3A-204ENST00000495988 GEMIN7Q9H840 131 aaKnown RBP10.27□□□□□ -0.77
APOBEC3A-204ENST00000495988 CDKN2A-AS1Q9UH64 79 aa10.27□□□□□ -0.77
APOBEC3A-204ENST00000495988 LINC00469Q8N7U9 141 aa10.26□□□□□ -0.77
APOBEC3A-204ENST00000495988 ERASQ7Z444 233 aa10.24□□□□□ -0.77
APOBEC3A-204ENST00000495988 SCGB3A1Q96QR1 104 aa10.24□□□□□ -0.77
APOBEC3A-204ENST00000495988 F8VRH5 84 aa10.23□□□□□ -0.77
APOBEC3A-204ENST00000495988 XAGE1AQ9HD64 81 aa10.23□□□□□ -0.77
APOBEC3A-204ENST00000495988 FA2HQ7L5A8 372 aa10.22□□□□□ -0.77
APOBEC3A-204ENST00000495988 C22orf24Q9Y442 160 aa10.22□□□□□ -0.77
APOBEC3A-204ENST00000495988 IGLV1-50A0A075B6I6 118 aa10.21□□□□□ -0.77
APOBEC3A-204ENST00000495988 KRTAP1-4P0C5Y4 121 aa10.21□□□□□ -0.77
APOBEC3A-204ENST00000495988 CXCL5P42830 114 aa10.21□□□□□ -0.77
APOBEC3A-204ENST00000495988 RNF213Q63HN8 5207 aa10.21□□□□□ -0.78
APOBEC3A-204ENST00000495988 TINCRA0A1B0GVN0 87 aa10.19□□□□□ -0.78
APOBEC3A-204ENST00000495988 LINC01549A6NIU2 74 aa10.19□□□□□ -0.78
APOBEC3A-204ENST00000495988 SMIM1B2RUZ4 78 aa10.19□□□□□ -0.78
APOBEC3A-204ENST00000495988 LBHQ53QV2 105 aaPredicted RBP10.19□□□□□ -0.78
APOBEC3A-204ENST00000495988 C18orf32Q8TCD1 76 aa10.19□□□□□ -0.78
APOBEC3A-204ENST00000495988 LINC01546A6NGU7 62 aa10.18□□□□□ -0.78
APOBEC3A-204ENST00000495988 NUPR1O60356 82 aa10.18□□□□□ -0.78
APOBEC3A-204ENST00000495988 PDZD11Q5EBL8 140 aa10.18□□□□□ -0.78
APOBEC3A-204ENST00000495988 COX7B2Q8TF08 81 aa10.18□□□□□ -0.78
APOBEC3A-204ENST00000495988 ZNF861PO60384 105 aa10.17□□□□□ -0.78
APOBEC3A-204ENST00000495988 SCO1O75880 301 aa10.17□□□□□ -0.78
APOBEC3A-204ENST00000495988 IGLV5-45A0A087WSX0 123 aa10.16□□□□□ -0.78
APOBEC3A-204ENST00000495988 MRPL55Q7Z7F7 128 aaKnown RBP10.16□□□□□ -0.78
APOBEC3A-204ENST00000495988 CST9LQ9H4G1 147 aa10.16□□□□□ -0.78
APOBEC3A-204ENST00000495988 COLCA2A8K830 154 aa10.15□□□□□ -0.78
APOBEC3A-204ENST00000495988 SPINK8P0C7L1 97 aa10.15□□□□□ -0.78
APOBEC3A-204ENST00000495988 RPL13AP40429 203 aaKnown RBP10.15□□□□□ -0.78
APOBEC3A-204ENST00000495988 RAB5BP61020 215 aa10.15□□□□□ -0.78
APOBEC3A-204ENST00000495988 PMVKQ15126 192 aa10.15□□□□□ -0.78
APOBEC3A-204ENST00000495988 TP73-AS1Q9UF72 201 aa10.15□□□□□ -0.78
APOBEC3A-204ENST00000495988 TRGC2P03986 189 aa10.14□□□□□ -0.79
APOBEC3A-204ENST00000495988 LINC00614P0C842 121 aa10.13□□□□□ -0.79
APOBEC3A-204ENST00000495988 S100A1P23297 94 aa10.12□□□□□ -0.79
APOBEC3A-204ENST00000495988 LPAP08519 4548 aa10.11□□□□□ -0.79
APOBEC3A-204ENST00000495988 H3BRM9 83 aa10.11□□□□□ -0.79
APOBEC3A-204ENST00000495988 ATP6V1G1O75348 118 aa10.11□□□□□ -0.79
APOBEC3A-204ENST00000495988 URB1-AS1Q96HZ7 61 aa10.11□□□□□ -0.79
APOBEC3A-204ENST00000495988 LINC00167Q96N53 147 aa10.11□□□□□ -0.79
APOBEC3A-204ENST00000495988 RPL37AP8A6NKH3 93 aa10.1□□□□□ -0.79
APOBEC3A-204ENST00000495988 BCE1O60756 84 aa10.1□□□□□ -0.79
APOBEC3A-204ENST00000495988 HBDP02042 147 aa10.1□□□□□ -0.79
APOBEC3A-204ENST00000495988 RPL28P46779 137 aaKnown RBP10.1□□□□□ -0.79
APOBEC3A-204ENST00000495988 GAGE10A6NGK3 116 aa10.09□□□□□ -0.79
APOBEC3A-204ENST00000495988 BAGE3Q86Y29 109 aa10.09□□□□□ -0.79
APOBEC3A-204ENST00000495988 CHCHD1Q96BP2 118 aaKnown RBP10.09□□□□□ -0.79
APOBEC3A-204ENST00000495988 ATP5LO75964 103 aa10.08□□□□□ -0.8
APOBEC3A-204ENST00000495988 NDUFA6P56556 154 aa10.08□□□□□ -0.8
APOBEC3A-204ENST00000495988 PMCHL1Q16048 86 aa10.08□□□□□ -0.8
APOBEC3A-204ENST00000495988 NKAPP1Q8N9T2 125 aa10.08□□□□□ -0.8
APOBEC3A-204ENST00000495988 A0A096LNJ9 63 aa10.07□□□□□ -0.8
APOBEC3A-204ENST00000495988 IGLC3P0DOY3 106 aa10.07□□□□□ -0.8
APOBEC3A-204ENST00000495988 IGLV5-37A0A075B6J1 123 aa10.06□□□□□ -0.8
APOBEC3A-204ENST00000495988 HSBP1O75506 76 aa10.05□□□□□ -0.8
APOBEC3A-204ENST00000495988 PFN2P35080 140 aa10.05□□□□□ -0.8
APOBEC3A-204ENST00000495988 PRR4Q16378 134 aa10.05□□□□□ -0.8
APOBEC3A-204ENST00000495988 IGLV5-39A0A0G2JS06 123 aa10.04□□□□□ -0.8
APOBEC3A-204ENST00000495988 ZNF22P17026 224 aaPredicted RBP10.04□□□□□ -0.8
APOBEC3A-204ENST00000495988 A0A087X002 238 aa10.03□□□□□ -0.8
APOBEC3A-204ENST00000495988 SERF1AO75920 110 aa10.03□□□□□ -0.8
APOBEC3A-204ENST00000495988 CRYGAP11844 174 aa10.02□□□□□ -0.81
APOBEC3A-204ENST00000495988 UBE2AP49459 152 aa10.02□□□□□ -0.81
APOBEC3A-204ENST00000495988 IGKV2-28A0A075B6P5 120 aa10.01□□□□□ -0.81
APOBEC3A-204ENST00000495988 TSPAN13O95857 204 aa10.01□□□□□ -0.81
APOBEC3A-204ENST00000495988 IGKV2D-28P01615 120 aa10.01□□□□□ -0.81
APOBEC3A-204ENST00000495988 TYMSOSQ8TAI1 123 aa10.01□□□□□ -0.81
APOBEC3A-204ENST00000495988 ERG28Q9UKR5 140 aa10.01□□□□□ -0.81
APOBEC3A-204ENST00000495988 FAM19A2Q8N3H0 131 aa10□□□□□ -0.81
APOBEC3A-204ENST00000495988 HIST1H2BKO60814 126 aa9.99□□□□□ -0.81
APOBEC3A-204ENST00000495988 HIST1H2BJP06899 126 aa9.99□□□□□ -0.81
APOBEC3A-204ENST00000495988 HIST1H2BOP23527 126 aa9.99□□□□□ -0.81
APOBEC3A-204ENST00000495988 HIST1H2BBP33778 126 aa9.99□□□□□ -0.81
APOBEC3A-204ENST00000495988 HIST1H2BDP58876 126 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms