RNA–Protein interactions for RNA: ENST00000494559.5

PDZRN3-211, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-211ENST00000494559 C6orf226Q5I0X4 101 aa10.58□□□□□ -0.72
PDZRN3-211ENST00000494559 PKD1L1Q8TDX9 2849 aa10.58□□□□□ -0.72
PDZRN3-211ENST00000494559 COX6CP09669 75 aa10.57□□□□□ -0.72
PDZRN3-211ENST00000494559 LINC00158P58513 81 aa10.57□□□□□ -0.72
PDZRN3-211ENST00000494559 LYPD5Q6UWN5 251 aa10.57□□□□□ -0.72
PDZRN3-211ENST00000494559 C9JAW5 83 aa10.57□□□□□ -0.72
PDZRN3-211ENST00000494559 H3BNG1 76 aa10.57□□□□□ -0.72
PDZRN3-211ENST00000494559 M0QXV9 152 aa10.57□□□□□ -0.72
PDZRN3-211ENST00000494559 LINC01620Q4KN68 170 aa10.57□□□□□ -0.72
PDZRN3-211ENST00000494559 IGLV10-54A0A075B6I4 117 aa10.56□□□□□ -0.72
PDZRN3-211ENST00000494559 COX7A2LO14548 114 aa10.56□□□□□ -0.72
PDZRN3-211ENST00000494559 SLC25A20O43772 301 aa10.56□□□□□ -0.72
PDZRN3-211ENST00000494559 KIAA0087Q14695 138 aa10.56□□□□□ -0.72
PDZRN3-211ENST00000494559 TEN1Q86WV5 123 aa10.56□□□□□ -0.72
PDZRN3-211ENST00000494559 FOXI1Q12951 378 aa10.55□□□□□ -0.72
PDZRN3-211ENST00000494559 Q6ZTC4 211 aa10.55□□□□□ -0.72
PDZRN3-211ENST00000494559 PRR34Q9NV39 138 aa10.55□□□□□ -0.72
PDZRN3-211ENST00000494559 J3QR89 54 aa10.54□□□□□ -0.72
PDZRN3-211ENST00000494559 CCL18P55774 89 aa10.54□□□□□ -0.72
PDZRN3-211ENST00000494559 KPRPQ5T749 579 aaPredicted RBP10.54□□□□□ -0.72
PDZRN3-211ENST00000494559 C2orf82Q6UX34 121 aa10.54□□□□□ -0.72
PDZRN3-211ENST00000494559 CLEC2BQ92478 149 aa10.54□□□□□ -0.72
PDZRN3-211ENST00000494559 LINC01600Q96MT4 127 aa10.54□□□□□ -0.72
PDZRN3-211ENST00000494559 PFN2P35080 140 aa10.54□□□□□ -0.72
PDZRN3-211ENST00000494559 SND1-IT1Q9HBX3 110 aa10.54□□□□□ -0.72
PDZRN3-211ENST00000494559 DNAH3Q8TD57 4116 aa10.53□□□□□ -0.72
PDZRN3-211ENST00000494559 IGKV2-28A0A075B6P5 120 aa10.53□□□□□ -0.72
PDZRN3-211ENST00000494559 LST1O00453 97 aa10.53□□□□□ -0.72
PDZRN3-211ENST00000494559 IGKV2D-28P01615 120 aa10.53□□□□□ -0.72
PDZRN3-211ENST00000494559 CARD19Q96LW7 228 aa10.53□□□□□ -0.72
PDZRN3-211ENST00000494559 MAST4O15021 2626 aa10.53□□□□□ -0.72
PDZRN3-211ENST00000494559 A0A0J9YWU9 116 aa10.53□□□□□ -0.72
PDZRN3-211ENST00000494559 ANKRD29Q8N6D5 301 aa10.53□□□□□ -0.72
PDZRN3-211ENST00000494559 LINC00337Q8N6G1 96 aa10.52□□□□□ -0.73
PDZRN3-211ENST00000494559 KLK12Q9UKR0 248 aa10.52□□□□□ -0.73
PDZRN3-211ENST00000494559 BAHCC1Q9P281 2608 aa10.52□□□□□ -0.73
PDZRN3-211ENST00000494559 TRAV13-2A0A0B4J235 113 aa10.51□□□□□ -0.73
PDZRN3-211ENST00000494559 TRBV10-2A0A0K0K1G8 114 aa10.51□□□□□ -0.73
PDZRN3-211ENST00000494559 ENHOQ6UWT2 76 aa10.51□□□□□ -0.73
PDZRN3-211ENST00000494559 PPDPFLQ8WWR9 84 aa10.51□□□□□ -0.73
PDZRN3-211ENST00000494559 MALP21145 153 aa10.51□□□□□ -0.73
PDZRN3-211ENST00000494559 CXCL5P42830 114 aa10.51□□□□□ -0.73
PDZRN3-211ENST00000494559 CKS1BP61024 79 aa10.51□□□□□ -0.73
PDZRN3-211ENST00000494559 ANK2Q01484 3957 aa10.5□□□□□ -0.73
PDZRN3-211ENST00000494559 GAGE12HA6NDE8 117 aa10.49□□□□□ -0.73
PDZRN3-211ENST00000494559 TENM3Q9P273 2699 aa10.49□□□□□ -0.73
PDZRN3-211ENST00000494559 CRPP02741 224 aa10.49□□□□□ -0.73
PDZRN3-211ENST00000494559 NANOS2P60321 138 aaKnown RBP10.49□□□□□ -0.73
PDZRN3-211ENST00000494559 CFAP161Q6P656 301 aa10.49□□□□□ -0.73
PDZRN3-211ENST00000494559 KLK5Q9Y337 293 aaPredicted RBP10.49□□□□□ -0.73
PDZRN3-211ENST00000494559 WFDC10BQ8IUB3 73 aa10.48□□□□□ -0.73
PDZRN3-211ENST00000494559 RPL28P46779 137 aaKnown RBP10.47□□□□□ -0.73
PDZRN3-211ENST00000494559 COX17Q14061 63 aa10.47□□□□□ -0.73
PDZRN3-211ENST00000494559 C11orf45Q8TAV5 145 aa10.47□□□□□ -0.73
PDZRN3-211ENST00000494559 COL6A5A8TX70 2615 aa10.46□□□□□ -0.73
PDZRN3-211ENST00000494559 DEFB131BA0A096LNP1 70 aa10.46□□□□□ -0.74
PDZRN3-211ENST00000494559 H3BT86 120 aa10.46□□□□□ -0.74
PDZRN3-211ENST00000494559 ESRGQ1W209 222 aa10.46□□□□□ -0.74
PDZRN3-211ENST00000494559 SPATA25Q9BR10 227 aa10.46□□□□□ -0.74
PDZRN3-211ENST00000494559 UBE2WQ96B02 151 aa10.45□□□□□ -0.74
PDZRN3-211ENST00000494559 TRAV8-4A0A0B4J246 113 aa10.45□□□□□ -0.74
PDZRN3-211ENST00000494559 PRB2P02812 416 aaPredicted RBP10.45□□□□□ -0.74
PDZRN3-211ENST00000494559 SCGB1A1P11684 91 aa10.45□□□□□ -0.74
PDZRN3-211ENST00000494559 NTN5Q8WTR8 489 aaPredicted RBP10.45□□□□□ -0.74
PDZRN3-211ENST00000494559 SPAG11BQ08648 103 aa10.44□□□□□ -0.74
PDZRN3-211ENST00000494559 C9orf116Q5BN46 136 aaPredicted RBP10.43□□□□□ -0.74
PDZRN3-211ENST00000494559 C6orf223Q8N319 242 aa10.43□□□□□ -0.74
PDZRN3-211ENST00000494559 SMIM11BQ8TCY0 68 aa10.43□□□□□ -0.74
PDZRN3-211ENST00000494559 C10orf25Q5T742 122 aa10.43□□□□□ -0.74
PDZRN3-211ENST00000494559 FAM218AQ96MZ4 157 aa10.43□□□□□ -0.74
PDZRN3-211ENST00000494559 K7EIL1 84 aa10.42□□□□□ -0.74
PDZRN3-211ENST00000494559 TM2D3Q9BRN9 247 aa10.42□□□□□ -0.74
PDZRN3-211ENST00000494559 NOTCH1P46531 2555 aa10.42□□□□□ -0.74
PDZRN3-211ENST00000494559 TRACP01848 142 aa10.42□□□□□ -0.74
PDZRN3-211ENST00000494559 KRTAP26-1Q6PEX3 210 aa10.42□□□□□ -0.74
PDZRN3-211ENST00000494559 UNQ6190/PRO20217Q6UXQ8 127 aa10.42□□□□□ -0.74
PDZRN3-211ENST00000494559 LINC00526Q96FQ7 95 aa10.41□□□□□ -0.74
PDZRN3-211ENST00000494559 TEX49A0A1B0GTD5 131 aa10.4□□□□□ -0.74
PDZRN3-211ENST00000494559 CDIP1Q9H305 208 aa10.4□□□□□ -0.74
PDZRN3-211ENST00000494559 NDUFC2O95298 119 aa10.4□□□□□ -0.75
PDZRN3-211ENST00000494559 LINC01556Q5JQF7 62 aa10.38□□□□□ -0.75
PDZRN3-211ENST00000494559 OR13C6PQ8NH95 151 aa10.38□□□□□ -0.75
PDZRN3-211ENST00000494559 MUC7Q8TAX7 377 aa10.38□□□□□ -0.75
PDZRN3-211ENST00000494559 SIGMAR1Q99720 223 aa10.38□□□□□ -0.75
PDZRN3-211ENST00000494559 GVQW2A0A096LPI5 108 aaPredicted RBP10.37□□□□□ -0.75
PDZRN3-211ENST00000494559 PRR3P79522 188 aaKnown RBP10.37□□□□□ -0.75
PDZRN3-211ENST00000494559 Q8NDZ9 215 aa10.37□□□□□ -0.75
PDZRN3-211ENST00000494559 TRAV10A0A0B4J240 114 aa10.36□□□□□ -0.75
PDZRN3-211ENST00000494559 A0A1B0GV72 72 aa10.35□□□□□ -0.75
PDZRN3-211ENST00000494559 H0YGX0 51 aa10.35□□□□□ -0.75
PDZRN3-211ENST00000494559 DEFB121Q5J5C9 76 aa10.35□□□□□ -0.75
PDZRN3-211ENST00000494559 MRAPQ8TCY5 172 aa10.35□□□□□ -0.75
PDZRN3-211ENST00000494559 NBEAL1Q6ZS30 2694 aa10.35□□□□□ -0.75
PDZRN3-211ENST00000494559 C6orf48Q9UBA6 75 aa10.34□□□□□ -0.75
PDZRN3-211ENST00000494559 HUWE1Q7Z6Z7 4374 aaKnown RBP10.34□□□□□ -0.75
PDZRN3-211ENST00000494559 A0A087WYN8 130 aa10.34□□□□□ -0.75
PDZRN3-211ENST00000494559 C22orf24Q9Y442 160 aa10.34□□□□□ -0.75
PDZRN3-211ENST00000494559 BAALC-AS2P0C853 105 aa10.33□□□□□ -0.76
PDZRN3-211ENST00000494559 DNAH10OSP0CZ25 163 aa10.33□□□□□ -0.76
PDZRN3-211ENST00000494559 C15orf53Q8NAA6 179 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms