RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 SPRR4Q96PI1 79 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 AMELXQ99217 191 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 LINC00472Q9H8W2 130 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 LINC00846Q9NV44 126 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 ABRACLQ9P1F3 81 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 CACNA1BQ00975 2339 aa0.78□□□□□ -2.28
LMNB1-207ENST00000494185 TIAM1Q13009 1591 aa0.78□□□□□ -2.29
LMNB1-207ENST00000494185 PIK3C2BO00750 1634 aa0.78□□□□□ -2.29
LMNB1-207ENST00000494185 SHROOM2Q13796 1616 aa0.78□□□□□ -2.29
LMNB1-207ENST00000494185 WIZO95785 1651 aa0.78□□□□□ -2.29
LMNB1-207ENST00000494185 TNS1Q9HBL0 1735 aaKnown RBP0.78□□□□□ -2.29
LMNB1-207ENST00000494185 RGPD4Q7Z3J3 1758 aa0.78□□□□□ -2.29
LMNB1-207ENST00000494185 ARFGEF2Q9Y6D5 1785 aa0.78□□□□□ -2.29
LMNB1-207ENST00000494185 SIP14410 1827 aa0.78□□□□□ -2.29
LMNB1-207ENST00000494185 RP1L1Q8IWN7 2480 aaPredicted RBP0.77□□□□□ -2.29
LMNB1-207ENST00000494185 ALMS1Q8TCU4 4167 aa0.77□□□□□ -2.29
LMNB1-207ENST00000494185 LCE6AA0A183 80 aa0.77□□□□□ -2.29
LMNB1-207ENST00000494185 LINC00959A0A1B0GUT2 108 aa0.77□□□□□ -2.29
LMNB1-207ENST00000494185 SMIM27A0A1W2PRY6 76 aa0.77□□□□□ -2.29
LMNB1-207ENST00000494185 HIGD1CA8MV81 97 aa0.77□□□□□ -2.29
LMNB1-207ENST00000494185 F8VRH5 84 aa0.77□□□□□ -2.29
LMNB1-207ENST00000494185 CCL3L1P16619 93 aa0.77□□□□□ -2.29
LMNB1-207ENST00000494185 FXYD4P59646 89 aa0.77□□□□□ -2.29
LMNB1-207ENST00000494185 ELOF1P60002 83 aaKnown RBP0.77□□□□□ -2.29
LMNB1-207ENST00000494185 SNRPGP62308 76 aaKnown RBP0.77□□□□□ -2.29
LMNB1-207ENST00000494185 FAM74A4Q5TZK3 123 aa0.77□□□□□ -2.29
LMNB1-207ENST00000494185 ATP5EP2Q5VTU8 51 aa0.77□□□□□ -2.29
LMNB1-207ENST00000494185 LENEPQ9Y5L5 61 aa0.77□□□□□ -2.29
LMNB1-207ENST00000494185 V9GYV3 84 aa0.77□□□□□ -2.29
LMNB1-207ENST00000494185 NKTRP30414 1462 aaKnown RBP0.77□□□□□ -2.29
LMNB1-207ENST00000494185 CEP170BQ9Y4F5 1589 aaPredicted RBP0.77□□□□□ -2.29
LMNB1-207ENST00000494185 KIAA0556O60303 1618 aa0.77□□□□□ -2.29
LMNB1-207ENST00000494185 ABCA5Q8WWZ7 1642 aa0.77□□□□□ -2.29
LMNB1-207ENST00000494185 BTAF1O14981 1849 aa0.77□□□□□ -2.29
LMNB1-207ENST00000494185 PLXNA1Q9UIW2 1896 aa0.77□□□□□ -2.29
LMNB1-207ENST00000494185 AHNAK2Q8IVF2 5795 aa0.76□□□□□ -2.29
LMNB1-207ENST00000494185 RGPD3A6NKT7 1758 aaPredicted RBP0.76□□□□□ -2.29
LMNB1-207ENST00000494185 SUPT6HQ7KZ85 1726 aaKnown RBP0.76□□□□□ -2.29
LMNB1-207ENST00000494185 UBR1Q8IWV7 1749 aa0.76□□□□□ -2.29
LMNB1-207ENST00000494185 CRYBG1Q9Y4K1 1723 aa0.76□□□□□ -2.29
LMNB1-207ENST00000494185 ZNF142P52746 1687 aaPredicted RBP0.76□□□□□ -2.29
LMNB1-207ENST00000494185 PAPPAQ13219 1627 aa0.76□□□□□ -2.29
LMNB1-207ENST00000494185 CPS1P31327 1500 aa0.76□□□□□ -2.29
LMNB1-207ENST00000494185 TRAV1-2A0A0B4J238 106 aa0.76□□□□□ -2.29
LMNB1-207ENST00000494185 TRAV21A0A0B4J279 112 aa0.76□□□□□ -2.29
LMNB1-207ENST00000494185 NBDYA0A0U1RRE5 68 aa0.76□□□□□ -2.29
LMNB1-207ENST00000494185 FCER1GP30273 86 aa0.76□□□□□ -2.29
LMNB1-207ENST00000494185 CCL18P55774 89 aa0.76□□□□□ -2.29
LMNB1-207ENST00000494185 ENHOQ6UWT2 76 aa0.76□□□□□ -2.29
LMNB1-207ENST00000494185 LINC00575Q6W349 94 aa0.76□□□□□ -2.29
LMNB1-207ENST00000494185 WFDC9Q8NEX5 89 aa0.76□□□□□ -2.29
LMNB1-207ENST00000494185 COX7B2Q8TF08 81 aa0.76□□□□□ -2.29
LMNB1-207ENST00000494185 Q96NJ1 140 aa0.76□□□□□ -2.29
LMNB1-207ENST00000494185 WFDC6Q9BQY6 131 aa0.76□□□□□ -2.29
LMNB1-207ENST00000494185 ASCC3Q8N3C0 2202 aaKnown RBP0.76□□□□□ -2.29
LMNB1-207ENST00000494185 PDCD11Q14690 1871 aaKnown RBP0.75□□□□□ -2.29
LMNB1-207ENST00000494185 IFT172Q9UG01 1749 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 MYOM1P52179 1685 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 CTTNBP2Q8WZ74 1663 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 ALS2Q96Q42 1657 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 LRP6O75581 1613 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 TOP2BQ02880 1626 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 MYO3AQ8NEV4 1616 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 ALKQ9UM73 1620 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 MAP3K4Q9Y6R4 1608 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 NFAT5O94916 1531 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 KIAA0586Q9BVV6 1533 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 TECTAO75443 2155 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 LINC01546A6NGU7 62 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 IGIPA6NJ69 53 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 NCR3O14931 201 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 COX6B1P14854 86 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 RPL37AP61513 92 aaKnown RBP0.75□□□□□ -2.29
LMNB1-207ENST00000494185 LINC00208Q96KT6 92 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 NRXN2Q9P2S2 1712 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 CLTCQ00610 1675 aaKnown RBP0.75□□□□□ -2.29
LMNB1-207ENST00000494185 RREB1Q92766 1687 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 KDM6BO15054 1643 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 USP32Q8NFA0 1604 aa0.75□□□□□ -2.29
LMNB1-207ENST00000494185 PHRF1Q9P1Y6 1649 aaKnown RBP0.75□□□□□ -2.29
LMNB1-207ENST00000494185 IQGAP2Q13576 1575 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 MRC1P22897 1456 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 ANKRD36A6QL64 1941 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 FLG2Q5D862 2391 aaPredicted RBP0.74□□□□□ -2.29
LMNB1-207ENST00000494185 TSC2P49815 1807 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 ZNF236Q9UL36 1845 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 A0A1B0GUT8 65 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 I3L3M4 83 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 SPINK4O60575 86 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 SERF2P84101 59 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 NREPQ16612 68 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 C10orf113Q5VZT2 155 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 KRTAP4-1Q9BYQ7 146 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 R4GMQ9 66 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 RGPD8O14715 1765 aaPredicted RBP0.74□□□□□ -2.29
LMNB1-207ENST00000494185 RGPD5Q99666 1765 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 PREX1Q8TCU6 1659 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 NCOA6Q14686 2063 aaPredicted RBP0.74□□□□□ -2.29
LMNB1-207ENST00000494185 ARHGEF5Q12774 1597 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 NWD1Q149M9 1564 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms