RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 KIAA1644Q3SXP7 199 aa8.14□□□□□ -1.11
CTDSP1-212ENST00000494067 CLLU1Q5K131 121 aa8.14□□□□□ -1.11
CTDSP1-212ENST00000494067 TRAV9-1A0A075B6T8 112 aa8.13□□□□□ -1.11
CTDSP1-212ENST00000494067 CXCL5P42830 114 aa8.13□□□□□ -1.11
CTDSP1-212ENST00000494067 LBHQ53QV2 105 aaPredicted RBP8.13□□□□□ -1.11
CTDSP1-212ENST00000494067 C9orf129Q5T035 196 aaKnown RBP8.13□□□□□ -1.11
CTDSP1-212ENST00000494067 UQCC3Q6UW78 93 aa8.13□□□□□ -1.11
CTDSP1-212ENST00000494067 TOMM6Q96B49 74 aa8.13□□□□□ -1.11
CTDSP1-212ENST00000494067 SCGB3A1Q96QR1 104 aa8.13□□□□□ -1.11
CTDSP1-212ENST00000494067 IGLV1-50A0A075B6I6 118 aa8.12□□□□□ -1.11
CTDSP1-212ENST00000494067 F8VRH5 84 aa8.12□□□□□ -1.11
CTDSP1-212ENST00000494067 ERASQ7Z444 233 aa8.12□□□□□ -1.11
CTDSP1-212ENST00000494067 PRR26Q8N8Z3 221 aa8.12□□□□□ -1.11
CTDSP1-212ENST00000494067 LINC00469Q8N7U9 141 aa8.11□□□□□ -1.11
CTDSP1-212ENST00000494067 CDKN2A-AS1Q9UH64 79 aa8.11□□□□□ -1.11
CTDSP1-212ENST00000494067 LPAP08519 4548 aa8.1□□□□□ -1.11
CTDSP1-212ENST00000494067 NUPR1O60356 82 aa8.1□□□□□ -1.11
CTDSP1-212ENST00000494067 RPL13AP40429 203 aaKnown RBP8.1□□□□□ -1.11
CTDSP1-212ENST00000494067 COX19Q49B96 90 aa8.1□□□□□ -1.11
CTDSP1-212ENST00000494067 TMEM218A2RU14 115 aa8.09□□□□□ -1.11
CTDSP1-212ENST00000494067 GNB1LQ9BYB4 327 aa8.09□□□□□ -1.11
CTDSP1-212ENST00000494067 XAGE1AQ9HD64 81 aa8.09□□□□□ -1.11
CTDSP1-212ENST00000494067 SMCO4Q9NRQ5 59 aa8.09□□□□□ -1.11
CTDSP1-212ENST00000494067 C22orf24Q9Y442 160 aa8.09□□□□□ -1.11
CTDSP1-212ENST00000494067 RNF213Q63HN8 5207 aa8.08□□□□□ -1.12
CTDSP1-212ENST00000494067 TINCRA0A1B0GVN0 87 aa8.08□□□□□ -1.12
CTDSP1-212ENST00000494067 PDZD11Q5EBL8 140 aa8.08□□□□□ -1.12
CTDSP1-212ENST00000494067 ZNF861PO60384 105 aa8.07□□□□□ -1.12
CTDSP1-212ENST00000494067 KRTAP1-4P0C5Y4 121 aa8.07□□□□□ -1.12
CTDSP1-212ENST00000494067 FA2HQ7L5A8 372 aa8.07□□□□□ -1.12
CTDSP1-212ENST00000494067 COX7B2Q8TF08 81 aa8.07□□□□□ -1.12
CTDSP1-212ENST00000494067 SEC11CQ9BY50 192 aa8.07□□□□□ -1.12
CTDSP1-212ENST00000494067 SMIM1B2RUZ4 78 aa8.06□□□□□ -1.12
CTDSP1-212ENST00000494067 H3BRM9 83 aa8.06□□□□□ -1.12
CTDSP1-212ENST00000494067 MRPL55Q7Z7F7 128 aaKnown RBP8.06□□□□□ -1.12
CTDSP1-212ENST00000494067 TP73-AS1Q9UF72 201 aa8.06□□□□□ -1.12
CTDSP1-212ENST00000494067 CARHSP1Q9Y2V2 147 aaKnown RBP8.06□□□□□ -1.12
CTDSP1-212ENST00000494067 LINC01546A6NGU7 62 aa8.05□□□□□ -1.12
CTDSP1-212ENST00000494067 RPL28P46779 137 aaKnown RBP8.05□□□□□ -1.12
CTDSP1-212ENST00000494067 FABP9Q0Z7S8 132 aa8.05□□□□□ -1.12
CTDSP1-212ENST00000494067 PMVKQ15126 192 aa8.05□□□□□ -1.12
CTDSP1-212ENST00000494067 MRPL18Q9H0U6 180 aaKnown RBP8.05□□□□□ -1.12
CTDSP1-212ENST00000494067 CST9LQ9H4G1 147 aa8.05□□□□□ -1.12
CTDSP1-212ENST00000494067 IGLV5-45A0A087WSX0 123 aa8.03□□□□□ -1.12
CTDSP1-212ENST00000494067 ATP5LO75964 103 aa8.03□□□□□ -1.12
CTDSP1-212ENST00000494067 RAB5BP61020 215 aa8.03□□□□□ -1.12
CTDSP1-212ENST00000494067 BCE1O60756 84 aa8.02□□□□□ -1.13
CTDSP1-212ENST00000494067 SPINK8P0C7L1 97 aa8.02□□□□□ -1.13
CTDSP1-212ENST00000494067 NDUFA6P56556 154 aa8.02□□□□□ -1.13
CTDSP1-212ENST00000494067 NKAPP1Q8N9T2 125 aa8.02□□□□□ -1.13
CTDSP1-212ENST00000494067 A0A096LNJ9 63 aa8.01□□□□□ -1.13
CTDSP1-212ENST00000494067 C10orf91Q5T1B1 145 aa8.01□□□□□ -1.13
CTDSP1-212ENST00000494067 COMMD7Q86VX2 200 aa8.01□□□□□ -1.13
CTDSP1-212ENST00000494067 URB1-AS1Q96HZ7 61 aa8.01□□□□□ -1.13
CTDSP1-212ENST00000494067 RPS10P5Q9NQ39 176 aa8.01□□□□□ -1.13
CTDSP1-212ENST00000494067 RPL37AP8A6NKH3 93 aa8□□□□□ -1.13
CTDSP1-212ENST00000494067 RHEBQ15382 184 aa8□□□□□ -1.13
CTDSP1-212ENST00000494067 PRR4Q16378 134 aa8□□□□□ -1.13
CTDSP1-212ENST00000494067 LINC00167Q96N53 147 aa8□□□□□ -1.13
CTDSP1-212ENST00000494067 GAGE10A6NGK3 116 aa7.98□□□□□ -1.13
CTDSP1-212ENST00000494067 LINC00614P0C842 121 aa7.98□□□□□ -1.13
CTDSP1-212ENST00000494067 CRYGAP11844 174 aa7.98□□□□□ -1.13
CTDSP1-212ENST00000494067 UBE2AP49459 152 aa7.98□□□□□ -1.13
CTDSP1-212ENST00000494067 TRAPPC1Q9Y5R8 145 aa7.98□□□□□ -1.13
CTDSP1-212ENST00000494067 IGLV5-37A0A075B6J1 123 aa7.97□□□□□ -1.13
CTDSP1-212ENST00000494067 PFN2P35080 140 aa7.97□□□□□ -1.13
CTDSP1-212ENST00000494067 HBDP02042 147 aa7.96□□□□□ -1.14
CTDSP1-212ENST00000494067 IGLC3P0DOY3 106 aa7.96□□□□□ -1.14
CTDSP1-212ENST00000494067 SFTA2Q6UW10 78 aa7.96□□□□□ -1.14
CTDSP1-212ENST00000494067 TYMSOSQ8TAI1 123 aa7.96□□□□□ -1.14
CTDSP1-212ENST00000494067 SCO1O75880 301 aa7.95□□□□□ -1.14
CTDSP1-212ENST00000494067 RPL24P83731 157 aaKnown RBP7.95□□□□□ -1.14
CTDSP1-212ENST00000494067 COX17Q14061 63 aa7.95□□□□□ -1.14
CTDSP1-212ENST00000494067 PMCHL1Q16048 86 aa7.95□□□□□ -1.14
CTDSP1-212ENST00000494067 TSPAN13O95857 204 aa7.94□□□□□ -1.14
CTDSP1-212ENST00000494067 C18orf32Q8TCD1 76 aa7.94□□□□□ -1.14
CTDSP1-212ENST00000494067 ERG28Q9UKR5 140 aa7.94□□□□□ -1.14
CTDSP1-212ENST00000494067 IGKV2-28A0A075B6P5 120 aa7.93□□□□□ -1.14
CTDSP1-212ENST00000494067 IGKV2D-28P01615 120 aa7.93□□□□□ -1.14
CTDSP1-212ENST00000494067 ZNF22P17026 224 aaPredicted RBP7.93□□□□□ -1.14
CTDSP1-212ENST00000494067 NDUFA5Q16718 116 aa7.93□□□□□ -1.14
CTDSP1-212ENST00000494067 TMEM170BQ5T4T1 132 aa7.93□□□□□ -1.14
CTDSP1-212ENST00000494067 BAGE3Q86Y29 109 aa7.93□□□□□ -1.14
CTDSP1-212ENST00000494067 A0A087X002 238 aa7.92□□□□□ -1.14
CTDSP1-212ENST00000494067 IGLV5-39A0A0G2JS06 123 aa7.92□□□□□ -1.14
CTDSP1-212ENST00000494067 Q8NDZ9 215 aa7.92□□□□□ -1.14
CTDSP1-212ENST00000494067 KRTAP13-1Q8IUC0 172 aa7.91□□□□□ -1.14
CTDSP1-212ENST00000494067 ZNF625Q96I27 306 aaPredicted RBP7.91□□□□□ -1.14
CTDSP1-212ENST00000494067 SND1-IT1Q9HBX3 110 aa7.91□□□□□ -1.14
CTDSP1-212ENST00000494067 SNAPINO95295 136 aa7.9□□□□□ -1.14
CTDSP1-212ENST00000494067 FAM19A1Q7Z5A9 133 aa7.9□□□□□ -1.14
CTDSP1-212ENST00000494067 ANAPC11Q9NYG5 84 aa7.9□□□□□ -1.14
CTDSP1-212ENST00000494067 IGKV2D-26A0A0A0MRZ7 120 aa7.89□□□□□ -1.15
CTDSP1-212ENST00000494067 ATP6V1G1O75348 118 aa7.89□□□□□ -1.15
CTDSP1-212ENST00000494067 APOC3P02656 99 aa7.89□□□□□ -1.15
CTDSP1-212ENST00000494067 VPREB1P12018 145 aa7.89□□□□□ -1.15
CTDSP1-212ENST00000494067 FAM229BQ4G0N7 80 aa7.89□□□□□ -1.15
CTDSP1-212ENST00000494067 SVBPQ8N300 66 aa7.89□□□□□ -1.15
CTDSP1-212ENST00000494067 YPEL4Q96NS1 127 aa7.89□□□□□ -1.15
CTDSP1-212ENST00000494067 CHTOPQ9Y3Y2 248 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms