RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 URB1O60287 2271 aaKnown RBP-0.12□□□□□ -2.43
CLK1-213ENST00000492793 SPRR2DP22532 72 aa-0.12□□□□□ -2.43
CLK1-213ENST00000492793 ASIPP42127 132 aa-0.12□□□□□ -2.43
CLK1-213ENST00000492793 RBP2P50120 134 aa-0.12□□□□□ -2.43
CLK1-213ENST00000492793 PEG3Q9GZU2 1588 aa-0.12□□□□□ -2.43
CLK1-213ENST00000492793 PKD1L1Q8TDX9 2849 aa-0.12□□□□□ -2.43
CLK1-213ENST00000492793 CHD1O14646 1710 aa-0.13□□□□□ -2.43
CLK1-213ENST00000492793 NDUFC1O43677 76 aa-0.13□□□□□ -2.43
CLK1-213ENST00000492793 TSC2P49815 1807 aa-0.13□□□□□ -2.43
CLK1-213ENST00000492793 PIEZO2Q9H5I5 2752 aa-0.13□□□□□ -2.43
CLK1-213ENST00000492793 TNXBP22105 4242 aa-0.14□□□□□ -2.43
CLK1-213ENST00000492793 TOPAZ1Q8N9V7 1692 aa-0.14□□□□□ -2.43
CLK1-213ENST00000492793 MUC12Q9UKN1 5478 aa-0.14□□□□□ -2.43
CLK1-213ENST00000492793 DNAJC13O75165 2243 aa-0.14□□□□□ -2.43
CLK1-213ENST00000492793 SETBP1Q9Y6X0 1596 aa-0.14□□□□□ -2.43
CLK1-213ENST00000492793 PLEKHH2Q8IVE3 1493 aa-0.14□□□□□ -2.43
CLK1-213ENST00000492793 NLRP1Q9C000 1473 aa-0.14□□□□□ -2.43
CLK1-213ENST00000492793 TRBV25-1A0A075B6N4 114 aa-0.14□□□□□ -2.43
CLK1-213ENST00000492793 H7BZZ5 65 aa-0.14□□□□□ -2.43
CLK1-213ENST00000492793 MPC2O95563 127 aa-0.14□□□□□ -2.43
CLK1-213ENST00000492793 TRGV9Q99603 122 aa-0.14□□□□□ -2.43
CLK1-213ENST00000492793 PMCHL2Q9BQD1 86 aa-0.14□□□□□ -2.43
CLK1-213ENST00000492793 VAMP8Q9BV40 100 aa-0.14□□□□□ -2.43
CLK1-213ENST00000492793 ABCA3Q99758 1704 aa-0.14□□□□□ -2.43
CLK1-213ENST00000492793 LRP2P98164 4655 aa-0.14□□□□□ -2.43
CLK1-213ENST00000492793 PRDM15P57071 1507 aaPredicted RBP-0.14□□□□□ -2.43
CLK1-213ENST00000492793 PDCD11Q14690 1871 aaKnown RBP-0.14□□□□□ -2.43
CLK1-213ENST00000492793 FLNCQ14315 2725 aa-0.15□□□□□ -2.43
CLK1-213ENST00000492793 ANKRD36BQ8N2N9 1353 aa-0.15□□□□□ -2.43
CLK1-213ENST00000492793 ALMS1Q8TCU4 4167 aa-0.15□□□□□ -2.43
CLK1-213ENST00000492793 A0A1B0GU69 56 aa-0.15□□□□□ -2.43
CLK1-213ENST00000492793 PMCHL1Q16048 86 aa-0.15□□□□□ -2.43
CLK1-213ENST00000492793 AP4S1Q9Y587 144 aa-0.15□□□□□ -2.43
CLK1-213ENST00000492793 NUP188Q5SRE5 1749 aa-0.16□□□□□ -2.43
CLK1-213ENST00000492793 MLH3Q9UHC1 1453 aa-0.16□□□□□ -2.43
CLK1-213ENST00000492793 KLK9Q2XQG4 91 aa-0.16□□□□□ -2.44
CLK1-213ENST00000492793 PSMG4Q5JS54 123 aa-0.16□□□□□ -2.44
CLK1-213ENST00000492793 NCMAPQ5T1S8 102 aa-0.16□□□□□ -2.44
CLK1-213ENST00000492793 DEFB107AQ8IZN7 70 aa-0.16□□□□□ -2.44
CLK1-213ENST00000492793 ACBD7Q8N6N7 88 aa-0.16□□□□□ -2.44
CLK1-213ENST00000492793 USMG5Q96IX5 58 aa-0.16□□□□□ -2.44
CLK1-213ENST00000492793 FXYD6Q9H0Q3 95 aa-0.16□□□□□ -2.44
CLK1-213ENST00000492793 CNTLNQ9NXG0 1405 aa-0.16□□□□□ -2.44
CLK1-213ENST00000492793 NSD1Q96L73 2696 aaPredicted RBP-0.16□□□□□ -2.44
CLK1-213ENST00000492793 XRN1Q8IZH2 1706 aaKnown RBP-0.16□□□□□ -2.44
CLK1-213ENST00000492793 MAP1BP46821 2468 aaKnown RBP-0.16□□□□□ -2.44
CLK1-213ENST00000492793 SPTA1P02549 2419 aa-0.17□□□□□ -2.44
CLK1-213ENST00000492793 H3BQF6 201 aa-0.17□□□□□ -2.44
CLK1-213ENST00000492793 SYS1-DBNDD2H3BUS1 97 aa-0.17□□□□□ -2.44
CLK1-213ENST00000492793 ATOX1O00244 68 aa-0.17□□□□□ -2.44
CLK1-213ENST00000492793 SPINK4O60575 86 aa-0.17□□□□□ -2.44
CLK1-213ENST00000492793 C6orf201Q7Z4U5 140 aa-0.17□□□□□ -2.44
CLK1-213ENST00000492793 SERP2Q8N6R1 65 aa-0.17□□□□□ -2.44
CLK1-213ENST00000492793 DEFB105AQ8NG35 78 aa-0.17□□□□□ -2.44
CLK1-213ENST00000492793 WNK1Q9H4A3 2382 aa-0.18□□□□□ -2.44
CLK1-213ENST00000492793 A0A0G2JMZ2 1700 aa-0.18□□□□□ -2.44
CLK1-213ENST00000492793 H0Y9P7 68 aa-0.18□□□□□ -2.44
CLK1-213ENST00000492793 UQCRHP07919 91 aa-0.18□□□□□ -2.44
CLK1-213ENST00000492793 LINC00032P0C843 101 aa-0.18□□□□□ -2.44
CLK1-213ENST00000492793 COX8AP10176 69 aa-0.18□□□□□ -2.44
CLK1-213ENST00000492793 DPY30Q9C005 99 aa-0.18□□□□□ -2.44
CLK1-213ENST00000492793 CRIPTQ9P021 101 aa-0.18□□□□□ -2.44
CLK1-213ENST00000492793 KIAA0556O60303 1618 aa-0.18□□□□□ -2.44
CLK1-213ENST00000492793 ATRQ13535 2644 aa-0.18□□□□□ -2.44
CLK1-213ENST00000492793 CHD8Q9HCK8 2581 aa-0.19□□□□□ -2.44
CLK1-213ENST00000492793 APLNQ9ULZ1 77 aa-0.19□□□□□ -2.44
CLK1-213ENST00000492793 TEX14Q8IWB6 1497 aa-0.19□□□□□ -2.44
CLK1-213ENST00000492793 NRXN1Q9ULB1 1477 aa-0.19□□□□□ -2.44
CLK1-213ENST00000492793 HECTD4Q9Y4D8 3996 aa-0.2□□□□□ -2.44
CLK1-213ENST00000492793 CPSF4LA6NMK7 179 aaKnown RBP-0.2□□□□□ -2.44
CLK1-213ENST00000492793 M0R143 59 aa-0.2□□□□□ -2.44
CLK1-213ENST00000492793 ARMS2P0C7Q2 107 aa-0.2□□□□□ -2.44
CLK1-213ENST00000492793 FAUP35544 74 aaKnown RBP-0.2□□□□□ -2.44
CLK1-213ENST00000492793 GNGT1P63211 74 aa-0.2□□□□□ -2.44
CLK1-213ENST00000492793 COL5A1-AS1Q5SY13 56 aa-0.2□□□□□ -2.44
CLK1-213ENST00000492793 PCLOQ9Y6V0 5065 aa-0.2□□□□□ -2.44
CLK1-213ENST00000492793 EP300Q09472 2414 aaPredicted RBP-0.21□□□□□ -2.44
CLK1-213ENST00000492793 KNDC1Q76NI1 1749 aa-0.21□□□□□ -2.44
CLK1-213ENST00000492793 FMN2Q9NZ56 1722 aa-0.21□□□□□ -2.44
CLK1-213ENST00000492793 PRKDCP78527 4128 aaKnown RBP-0.21□□□□□ -2.44
CLK1-213ENST00000492793 PAPPA2Q9BXP8 1791 aa-0.21□□□□□ -2.44
CLK1-213ENST00000492793 APC2O95996 2303 aa-0.21□□□□□ -2.44
CLK1-213ENST00000492793 SLIT1O75093 1534 aa-0.21□□□□□ -2.44
CLK1-213ENST00000492793 LOC730098B7Z3J9 87 aa-0.21□□□□□ -2.44
CLK1-213ENST00000492793 MARF1Q9Y4F3 1742 aaKnown RBP-0.21□□□□□ -2.44
CLK1-213ENST00000492793 RAPGEF2Q9Y4G8 1499 aa-0.22□□□□□ -2.44
CLK1-213ENST00000492793 PSENENQ9NZ42 101 aa-0.22□□□□□ -2.44
CLK1-213ENST00000492793 STAB1Q9NY15 2570 aa-0.22□□□□□ -2.45
CLK1-213ENST00000492793 EDC4Q6P2E9 1401 aaKnown RBP-0.22□□□□□ -2.45
CLK1-213ENST00000492793 FYCO1Q9BQS8 1478 aa-0.22□□□□□ -2.45
CLK1-213ENST00000492793 DCHS2Q6V1P9 2916 aa-0.23□□□□□ -2.45
CLK1-213ENST00000492793 FLNAP21333 2647 aaKnown RBP-0.23□□□□□ -2.45
CLK1-213ENST00000492793 TRBV7-7A0A0K0K1E9 115 aa-0.23□□□□□ -2.45
CLK1-213ENST00000492793 NKTRP30414 1462 aaKnown RBP-0.23□□□□□ -2.45
CLK1-213ENST00000492793 LRP1BQ9NZR2 4599 aa-0.24□□□□□ -2.45
CLK1-213ENST00000492793 ANKRD36A6QL64 1941 aa-0.24□□□□□ -2.45
CLK1-213ENST00000492793 UQCRHLA0A096LP55 91 aa-0.24□□□□□ -2.45
CLK1-213ENST00000492793 F8WEM9 126 aa-0.24□□□□□ -2.45
CLK1-213ENST00000492793 I3L3M4 83 aa-0.24□□□□□ -2.45
CLK1-213ENST00000492793 HMGN3Q15651 99 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms