RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 SPANXCQ9NY87 97 aa7.78□□□□□ -1.16
SNED1-211ENST00000491761 GCN1Q92616 2671 aaKnown RBP7.78□□□□□ -1.16
SNED1-211ENST00000491761 Q8N2B8 174 aa7.78□□□□□ -1.16
SNED1-211ENST00000491761 AMELXQ99217 191 aa7.78□□□□□ -1.16
SNED1-211ENST00000491761 WFDC10AQ9H1F0 79 aa7.78□□□□□ -1.16
SNED1-211ENST00000491761 H7C423 109 aa7.77□□□□□ -1.17
SNED1-211ENST00000491761 FAM110AQ9BQ89 295 aa7.77□□□□□ -1.17
SNED1-211ENST00000491761 PRO0461Q9UI25 63 aa7.77□□□□□ -1.17
SNED1-211ENST00000491761 A0A087WVE0 104 aa7.77□□□□□ -1.17
SNED1-211ENST00000491761 TRBV30A0A0K0K1B3 111 aa7.77□□□□□ -1.17
SNED1-211ENST00000491761 LOC100131303A0A0U1RQF7 123 aa7.77□□□□□ -1.17
SNED1-211ENST00000491761 UBE2D4Q9Y2X8 147 aa7.77□□□□□ -1.17
SNED1-211ENST00000491761 KLK5Q9Y337 293 aaPredicted RBP7.77□□□□□ -1.17
SNED1-211ENST00000491761 LINC01006Q8NI28 216 aa7.76□□□□□ -1.17
SNED1-211ENST00000491761 UPK3BQ9BT76 320 aa7.76□□□□□ -1.17
SNED1-211ENST00000491761 CDIP1Q9H305 208 aa7.76□□□□□ -1.17
SNED1-211ENST00000491761 Q6ZSN1 163 aa7.76□□□□□ -1.17
SNED1-211ENST00000491761 RMI2Q96E14 147 aa7.76□□□□□ -1.17
SNED1-211ENST00000491761 A0A096LNI7 61 aa7.76□□□□□ -1.17
SNED1-211ENST00000491761 LOC107984640A0A0U1RRK4 108 aa7.76□□□□□ -1.17
SNED1-211ENST00000491761 TMEM258P61165 79 aa7.76□□□□□ -1.17
SNED1-211ENST00000491761 LINC00482Q8N8I6 264 aa7.76□□□□□ -1.17
SNED1-211ENST00000491761 CHCHD7Q9BUK0 85 aa7.76□□□□□ -1.17
SNED1-211ENST00000491761 SNURFQ9Y675 71 aa7.76□□□□□ -1.17
SNED1-211ENST00000491761 V9GYY9 64 aa7.76□□□□□ -1.17
SNED1-211ENST00000491761 CELSR1Q9NYQ6 3014 aa7.76□□□□□ -1.17
SNED1-211ENST00000491761 ETDCA0A1B0GVM5 59 aa7.76□□□□□ -1.17
SNED1-211ENST00000491761 SPANXDQ9BXN6 97 aa7.76□□□□□ -1.17
SNED1-211ENST00000491761 TIRAPP58753 221 aa7.75□□□□□ -1.17
SNED1-211ENST00000491761 C6orf99Q4VX62 202 aa7.75□□□□□ -1.17
SNED1-211ENST00000491761 FAM222AQ5U5X8 452 aa7.75□□□□□ -1.17
SNED1-211ENST00000491761 C3orf22Q8N5N4 141 aa7.75□□□□□ -1.17
SNED1-211ENST00000491761 JMJD7-PLA2G4BH0Y9G9 81 aa7.75□□□□□ -1.17
SNED1-211ENST00000491761 A8MTW9 85 aa7.74□□□□□ -1.17
SNED1-211ENST00000491761 LST1O00453 97 aa7.74□□□□□ -1.17
SNED1-211ENST00000491761 NDUFS5O43920 106 aa7.74□□□□□ -1.17
SNED1-211ENST00000491761 PRR4Q16378 134 aa7.74□□□□□ -1.17
SNED1-211ENST00000491761 BEAN1Q3B7T3 259 aa7.74□□□□□ -1.17
SNED1-211ENST00000491761 NDUFA1O15239 70 aa7.74□□□□□ -1.17
SNED1-211ENST00000491761 ODF3L2Q3SX64 289 aa7.74□□□□□ -1.17
SNED1-211ENST00000491761 ADAMTSL4-AS1Q5T5F5 129 aa7.74□□□□□ -1.17
SNED1-211ENST00000491761 HRCT1Q6UXD1 115 aa7.74□□□□□ -1.17
SNED1-211ENST00000491761 C11orf72Q8NBR9 251 aa7.74□□□□□ -1.17
SNED1-211ENST00000491761 SMIM9A6NGZ8 99 aa7.73□□□□□ -1.17
SNED1-211ENST00000491761 FUSP35637 526 aaKnown RBP eCLIP7.73□□□□□ -1.17
SNED1-211ENST00000491761 CCL18P55774 89 aa7.73□□□□□ -1.17
SNED1-211ENST00000491761 USP17L23D6RBM5 183 aa7.73□□□□□ -1.17
SNED1-211ENST00000491761 TMEM256-PLSCR3K7ERE1 68 aa7.73□□□□□ -1.17
SNED1-211ENST00000491761 HILS1P60008 231 aa7.73□□□□□ -1.17
SNED1-211ENST00000491761 Q9UF83 564 aa7.72□□□□□ -1.17
SNED1-211ENST00000491761 SMCPP49901 116 aaPredicted RBP7.72□□□□□ -1.17
SNED1-211ENST00000491761 PRR3P79522 188 aaKnown RBP7.71□□□□□ -1.17
SNED1-211ENST00000491761 FAM19A5Q7Z5A7 132 aaPredicted RBP7.71□□□□□ -1.18
SNED1-211ENST00000491761 C1orf158Q8N1D5 194 aa7.71□□□□□ -1.18
SNED1-211ENST00000491761 DIRC1Q969H9 104 aa7.71□□□□□ -1.18
SNED1-211ENST00000491761 SMIM11BQ8TCY0 68 aa7.7□□□□□ -1.18
SNED1-211ENST00000491761 TIMM17BO60830 172 aa7.7□□□□□ -1.18
SNED1-211ENST00000491761 CXCL5P42830 114 aa7.7□□□□□ -1.18
SNED1-211ENST00000491761 C3orf84H3BNL1 204 aa7.7□□□□□ -1.18
SNED1-211ENST00000491761 Q6ZQY7 126 aa7.69□□□□□ -1.18
SNED1-211ENST00000491761 FLNCQ14315 2725 aa7.69□□□□□ -1.18
SNED1-211ENST00000491761 REG3AQ06141 175 aa7.69□□□□□ -1.18
SNED1-211ENST00000491761 IGSF10Q6WRI0 2623 aa7.69□□□□□ -1.18
SNED1-211ENST00000491761 CHCHD10Q8WYQ3 142 aaPredicted RBP7.68□□□□□ -1.18
SNED1-211ENST00000491761 IGKV2-24A0A0C4DH68 120 aa7.68□□□□□ -1.18
SNED1-211ENST00000491761 COL12A1Q99715 3063 aa7.68□□□□□ -1.18
SNED1-211ENST00000491761 TRBV6-8A0A0A6YYG3 113 aa7.68□□□□□ -1.18
SNED1-211ENST00000491761 LRCOL1A6NCL2 159 aa7.67□□□□□ -1.18
SNED1-211ENST00000491761 ITPR1Q14643 2758 aa7.67□□□□□ -1.18
SNED1-211ENST00000491761 BPY2O14599 106 aa7.67□□□□□ -1.18
SNED1-211ENST00000491761 COX6A2Q02221 97 aa7.67□□□□□ -1.18
SNED1-211ENST00000491761 FAM236DA0A1B0GTK5 79 aa7.67□□□□□ -1.18
SNED1-211ENST00000491761 FAM236CP0DP71 79 aa7.67□□□□□ -1.18
SNED1-211ENST00000491761 LINC00242Q5T6M2 205 aa7.67□□□□□ -1.18
SNED1-211ENST00000491761 SPTSSBQ8NFR3 76 aa7.67□□□□□ -1.18
SNED1-211ENST00000491761 CSDC2Q9Y534 153 aaKnown RBP7.67□□□□□ -1.18
SNED1-211ENST00000491761 UNC79Q9P2D8 2635 aa7.67□□□□□ -1.18
SNED1-211ENST00000491761 C9orf116Q5BN46 136 aaPredicted RBP7.67□□□□□ -1.18
SNED1-211ENST00000491761 COX7CP15954 63 aa7.66□□□□□ -1.18
SNED1-211ENST00000491761 SBSPONQ8IVN8 264 aa7.66□□□□□ -1.18
SNED1-211ENST00000491761 HIGD2AQ9BW72 106 aa7.66□□□□□ -1.18
SNED1-211ENST00000491761 COX7BP24311 80 aa7.65□□□□□ -1.18
SNED1-211ENST00000491761 SERP2Q8N6R1 65 aa7.65□□□□□ -1.18
SNED1-211ENST00000491761 LITAFQ99732 161 aa7.65□□□□□ -1.18
SNED1-211ENST00000491761 AKAP9Q99996 3911 aa7.65□□□□□ -1.18
SNED1-211ENST00000491761 FHL3Q13643 280 aa7.65□□□□□ -1.18
SNED1-211ENST00000491761 IGKV2-28A0A075B6P5 120 aa7.65□□□□□ -1.19
SNED1-211ENST00000491761 IGKV2D-28P01615 120 aa7.65□□□□□ -1.19
SNED1-211ENST00000491761 CCKP06307 115 aa7.64□□□□□ -1.19
SNED1-211ENST00000491761 Q6Q795 121 aa7.64□□□□□ -1.19
SNED1-211ENST00000491761 TRBV6-4A0A1B0GX49 114 aa7.64□□□□□ -1.19
SNED1-211ENST00000491761 IBA57-AS1B1ANH7 110 aa7.64□□□□□ -1.19
SNED1-211ENST00000491761 C11orf45Q8TAV5 145 aa7.64□□□□□ -1.19
SNED1-211ENST00000491761 RETNQ9HD89 108 aa7.64□□□□□ -1.19
SNED1-211ENST00000491761 CDC42SE2Q9NRR3 84 aa7.64□□□□□ -1.19
SNED1-211ENST00000491761 IGLV5-45A0A087WSX0 123 aa7.64□□□□□ -1.19
SNED1-211ENST00000491761 A0A0J9YWU9 116 aa7.63□□□□□ -1.19
SNED1-211ENST00000491761 FAM104AQ969W3 186 aa7.63□□□□□ -1.19
SNED1-211ENST00000491761 SMIM1B2RUZ4 78 aa7.63□□□□□ -1.19
SNED1-211ENST00000491761 EIF4EBP3O60516 100 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms