RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 TOMM7Q9P0U1 55 aa14.12□□□□□ -0.15
CUL4A-209ENST00000488558 CDKN2A-AS1Q9UH64 79 aa14.12□□□□□ -0.15
CUL4A-209ENST00000488558 M0QXV9 152 aa14.11□□□□□ -0.15
CUL4A-209ENST00000488558 C6orf226Q5I0X4 101 aa14.11□□□□□ -0.15
CUL4A-209ENST00000488558 ALKBH7Q9BT30 221 aaPredicted RBP14.11□□□□□ -0.15
CUL4A-209ENST00000488558 C9orf129Q5T035 196 aaKnown RBP14.1□□□□□ -0.15
CUL4A-209ENST00000488558 SCGB3A1Q96QR1 104 aa14.1□□□□□ -0.15
CUL4A-209ENST00000488558 C10orf91Q5T1B1 145 aa14.09□□□□□ -0.15
CUL4A-209ENST00000488558 COMMD7Q86VX2 200 aa14.09□□□□□ -0.15
CUL4A-209ENST00000488558 KRTAP11-1Q8IUC1 163 aa14.09□□□□□ -0.15
CUL4A-209ENST00000488558 DIRC1Q969H9 104 aa14.09□□□□□ -0.15
CUL4A-209ENST00000488558 CXCL5P42830 114 aa14.08□□□□□ -0.16
CUL4A-209ENST00000488558 F8VRH5 84 aa14.07□□□□□ -0.16
CUL4A-209ENST00000488558 ODF1Q14990 250 aa14.07□□□□□ -0.16
CUL4A-209ENST00000488558 RHEBQ15382 184 aa14.07□□□□□ -0.16
CUL4A-209ENST00000488558 TINCRA0A1B0GVN0 87 aa14.06□□□□□ -0.16
CUL4A-209ENST00000488558 UBE2BP63146 152 aa14.06□□□□□ -0.16
CUL4A-209ENST00000488558 CARHSP1Q9Y2V2 147 aaKnown RBP14.06□□□□□ -0.16
CUL4A-209ENST00000488558 IGLV5-45A0A087WSX0 123 aa14.05□□□□□ -0.16
CUL4A-209ENST00000488558 LINC00469Q8N7U9 141 aa14.05□□□□□ -0.16
CUL4A-209ENST00000488558 SMIM1B2RUZ4 78 aa14.04□□□□□ -0.16
CUL4A-209ENST00000488558 H0Y9J4 135 aa14.04□□□□□ -0.16
CUL4A-209ENST00000488558 MRPL18Q9H0U6 180 aaKnown RBP14.04□□□□□ -0.16
CUL4A-209ENST00000488558 PDZD11Q5EBL8 140 aa14.03□□□□□ -0.16
CUL4A-209ENST00000488558 FA2HQ7L5A8 372 aa14.02□□□□□ -0.17
CUL4A-209ENST00000488558 CST9LQ9H4G1 147 aa14.02□□□□□ -0.17
CUL4A-209ENST00000488558 SMCO4Q9NRQ5 59 aa14.02□□□□□ -0.17
CUL4A-209ENST00000488558 FABP9Q0Z7S8 132 aa14.01□□□□□ -0.17
CUL4A-209ENST00000488558 RPS10P5Q9NQ39 176 aa14.01□□□□□ -0.17
CUL4A-209ENST00000488558 PMVKQ15126 192 aa14□□□□□ -0.17
CUL4A-209ENST00000488558 COX7B2Q8TF08 81 aa13.99□□□□□ -0.17
CUL4A-209ENST00000488558 XAGE1AQ9HD64 81 aa13.98□□□□□ -0.17
CUL4A-209ENST00000488558 LRP2P98164 4655 aa13.97□□□□□ -0.17
CUL4A-209ENST00000488558 LBHQ53QV2 105 aaPredicted RBP13.97□□□□□ -0.17
CUL4A-209ENST00000488558 TP73-AS1Q9UF72 201 aa13.97□□□□□ -0.17
CUL4A-209ENST00000488558 C22orf24Q9Y442 160 aa13.97□□□□□ -0.17
CUL4A-209ENST00000488558 NUPR1O60356 82 aa13.95□□□□□ -0.18
CUL4A-209ENST00000488558 IGLV1-50A0A075B6I6 118 aa13.94□□□□□ -0.18
CUL4A-209ENST00000488558 H3BRM9 83 aa13.93□□□□□ -0.18
CUL4A-209ENST00000488558 KRTAP1-4P0C5Y4 121 aa13.93□□□□□ -0.18
CUL4A-209ENST00000488558 PRR26Q8N8Z3 221 aa13.93□□□□□ -0.18
CUL4A-209ENST00000488558 A0A096LNJ9 63 aa13.92□□□□□ -0.18
CUL4A-209ENST00000488558 SPINK8P0C7L1 97 aa13.92□□□□□ -0.18
CUL4A-209ENST00000488558 IGLC3P0DOY3 106 aa13.92□□□□□ -0.18
CUL4A-209ENST00000488558 C18orf32Q8TCD1 76 aa13.92□□□□□ -0.18
CUL4A-209ENST00000488558 MRPL55Q7Z7F7 128 aaKnown RBP13.91□□□□□ -0.18
CUL4A-209ENST00000488558 TRAPPC1Q9Y5R8 145 aa13.91□□□□□ -0.18
CUL4A-209ENST00000488558 ZNF861PO60384 105 aa13.9□□□□□ -0.18
CUL4A-209ENST00000488558 LINC00614P0C842 121 aa13.9□□□□□ -0.18
CUL4A-209ENST00000488558 URB1-AS1Q96HZ7 61 aa13.9□□□□□ -0.18
CUL4A-209ENST00000488558 HBDP02042 147 aa13.89□□□□□ -0.19
CUL4A-209ENST00000488558 IGLV5-39A0A0G2JS06 123 aa13.88□□□□□ -0.19
CUL4A-209ENST00000488558 ATP5LO75964 103 aa13.87□□□□□ -0.19
CUL4A-209ENST00000488558 IGLV5-37A0A075B6J1 123 aa13.86□□□□□ -0.19
CUL4A-209ENST00000488558 SNAPINO95295 136 aa13.86□□□□□ -0.19
CUL4A-209ENST00000488558 APOC3P02656 99 aa13.86□□□□□ -0.19
CUL4A-209ENST00000488558 RPL13AP40429 203 aaKnown RBP13.86□□□□□ -0.19
CUL4A-209ENST00000488558 NDUFA5Q16718 116 aa13.86□□□□□ -0.19
CUL4A-209ENST00000488558 SVBPQ8N300 66 aa13.86□□□□□ -0.19
CUL4A-209ENST00000488558 RAB5BP61020 215 aa13.85□□□□□ -0.19
CUL4A-209ENST00000488558 ZNF22P17026 224 aaPredicted RBP13.84□□□□□ -0.19
CUL4A-209ENST00000488558 BCE1O60756 84 aa13.83□□□□□ -0.2
CUL4A-209ENST00000488558 NDUFA6P56556 154 aa13.83□□□□□ -0.2
CUL4A-209ENST00000488558 LINC00167Q96N53 147 aa13.83□□□□□ -0.2
CUL4A-209ENST00000488558 RPL28P46779 137 aaKnown RBP13.82□□□□□ -0.2
CUL4A-209ENST00000488558 PMCHL1Q16048 86 aa13.8□□□□□ -0.2
CUL4A-209ENST00000488558 NKAPP1Q8N9T2 125 aa13.8□□□□□ -0.2
CUL4A-209ENST00000488558 SFTA2Q6UW10 78 aa13.79□□□□□ -0.2
CUL4A-209ENST00000488558 COX17Q14061 63 aa13.78□□□□□ -0.2
CUL4A-209ENST00000488558 C11orf86A6NJI1 115 aa13.77□□□□□ -0.21
CUL4A-209ENST00000488558 RPL37AP8A6NKH3 93 aa13.77□□□□□ -0.21
CUL4A-209ENST00000488558 BAGE3Q86Y29 109 aa13.77□□□□□ -0.21
CUL4A-209ENST00000488558 YPEL4Q96NS1 127 aa13.77□□□□□ -0.21
CUL4A-209ENST00000488558 ERG28Q9UKR5 140 aa13.77□□□□□ -0.21
CUL4A-209ENST00000488558 GAGE10A6NGK3 116 aa13.76□□□□□ -0.21
CUL4A-209ENST00000488558 PFN2P35080 140 aa13.76□□□□□ -0.21
CUL4A-209ENST00000488558 TMEM170BQ5T4T1 132 aa13.74□□□□□ -0.21
CUL4A-209ENST00000488558 CHCHD1Q96BP2 118 aaKnown RBP13.74□□□□□ -0.21
CUL4A-209ENST00000488558 RNF213Q63HN8 5207 aa13.74□□□□□ -0.21
CUL4A-209ENST00000488558 KRTAP13-1Q8IUC0 172 aa13.73□□□□□ -0.21
CUL4A-209ENST00000488558 SND1-IT1Q9HBX3 110 aa13.73□□□□□ -0.21
CUL4A-209ENST00000488558 CHTOPQ9Y3Y2 248 aaKnown RBP13.72□□□□□ -0.21
CUL4A-209ENST00000488558 TRAV12-1A0A0B4J245 112 aa13.71□□□□□ -0.21
CUL4A-209ENST00000488558 VPREB1P12018 145 aa13.71□□□□□ -0.21
CUL4A-209ENST00000488558 ZNF625Q96I27 306 aaPredicted RBP13.71□□□□□ -0.21
CUL4A-209ENST00000488558 RPL24P83731 157 aaKnown RBP13.7□□□□□ -0.22
CUL4A-209ENST00000488558 IGKV2-28A0A075B6P5 120 aa13.68□□□□□ -0.22
CUL4A-209ENST00000488558 IGKV2D-28P01615 120 aa13.68□□□□□ -0.22
CUL4A-209ENST00000488558 UBE2AP49459 152 aa13.68□□□□□ -0.22
CUL4A-209ENST00000488558 IFI27L1Q96BM0 104 aa13.68□□□□□ -0.22
CUL4A-209ENST00000488558 A0A087X002 238 aa13.67□□□□□ -0.22
CUL4A-209ENST00000488558 SCO1O75880 301 aa13.67□□□□□ -0.22
CUL4A-209ENST00000488558 CRYGAP11844 174 aa13.67□□□□□ -0.22
CUL4A-209ENST00000488558 LPAP08519 4548 aa13.66□□□□□ -0.22
CUL4A-209ENST00000488558 TMEM223A0PJW6 202 aa13.66□□□□□ -0.22
CUL4A-209ENST00000488558 TMEM126AQ9H061 195 aa13.63□□□□□ -0.23
CUL4A-209ENST00000488558 HSBP1O75506 76 aa13.62□□□□□ -0.23
CUL4A-209ENST00000488558 FAM229BQ4G0N7 80 aa13.62□□□□□ -0.23
CUL4A-209ENST00000488558 Q8NDZ9 215 aa13.62□□□□□ -0.23
CUL4A-209ENST00000488558 CBLN2Q8IUK8 224 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms