RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 Q6ZTC4 211 aa13.93□□□□□ -0.18
HPS3-206ENST00000486530 COX7A2LO14548 114 aa13.92□□□□□ -0.18
HPS3-206ENST00000486530 PRB2P02812 416 aaPredicted RBP13.91□□□□□ -0.18
HPS3-206ENST00000486530 MIR7-3HGQ8N6C7 128 aa13.91□□□□□ -0.18
HPS3-206ENST00000486530 RNF151Q2KHN1 245 aa13.91□□□□□ -0.18
HPS3-206ENST00000486530 KPRPQ5T749 579 aaPredicted RBP13.91□□□□□ -0.18
HPS3-206ENST00000486530 COX6CP09669 75 aa13.9□□□□□ -0.18
HPS3-206ENST00000486530 LINC00158P58513 81 aa13.9□□□□□ -0.18
HPS3-206ENST00000486530 ETDBQ3ZM63 59 aa13.9□□□□□ -0.18
HPS3-206ENST00000486530 A0A0J9YWU9 116 aa13.89□□□□□ -0.19
HPS3-206ENST00000486530 SMCPP49901 116 aaPredicted RBP13.89□□□□□ -0.19
HPS3-206ENST00000486530 ATXN8Q156A1 80 aa13.89□□□□□ -0.19
HPS3-206ENST00000486530 IGLV10-54A0A075B6I4 117 aa13.89□□□□□ -0.19
HPS3-206ENST00000486530 K7EIL1 84 aa13.88□□□□□ -0.19
HPS3-206ENST00000486530 PRR34Q9NV39 138 aa13.88□□□□□ -0.19
HPS3-206ENST00000486530 MALP21145 153 aa13.87□□□□□ -0.19
HPS3-206ENST00000486530 CXCL5P42830 114 aa13.87□□□□□ -0.19
HPS3-206ENST00000486530 FOXI1Q12951 378 aa13.87□□□□□ -0.19
HPS3-206ENST00000486530 NOTCH1P46531 2555 aa13.86□□□□□ -0.19
HPS3-206ENST00000486530 C11orf45Q8TAV5 145 aa13.85□□□□□ -0.19
HPS3-206ENST00000486530 KLK12Q9UKR0 248 aa13.85□□□□□ -0.19
HPS3-206ENST00000486530 CBY1Q9Y3M2 126 aa13.85□□□□□ -0.19
HPS3-206ENST00000486530 PFN2P35080 140 aa13.84□□□□□ -0.19
HPS3-206ENST00000486530 CKS1BP61024 79 aa13.84□□□□□ -0.19
HPS3-206ENST00000486530 CFAP161Q6P656 301 aa13.84□□□□□ -0.19
HPS3-206ENST00000486530 VPS25Q9BRG1 176 aa13.84□□□□□ -0.19
HPS3-206ENST00000486530 NANOS2P60321 138 aaKnown RBP13.84□□□□□ -0.19
HPS3-206ENST00000486530 KIAA0087Q14695 138 aa13.84□□□□□ -0.19
HPS3-206ENST00000486530 SND1-IT1Q9HBX3 110 aa13.84□□□□□ -0.19
HPS3-206ENST00000486530 J3QR89 54 aa13.83□□□□□ -0.2
HPS3-206ENST00000486530 DEFB131BA0A096LNP1 70 aa13.82□□□□□ -0.2
HPS3-206ENST00000486530 TRAV13-2A0A0B4J235 113 aa13.82□□□□□ -0.2
HPS3-206ENST00000486530 C9JAW5 83 aa13.82□□□□□ -0.2
HPS3-206ENST00000486530 M0QXV9 152 aa13.82□□□□□ -0.2
HPS3-206ENST00000486530 LINC01620Q4KN68 170 aa13.82□□□□□ -0.2
HPS3-206ENST00000486530 C2orf82Q6UX34 121 aa13.82□□□□□ -0.2
HPS3-206ENST00000486530 SPATA25Q9BR10 227 aa13.82□□□□□ -0.2
HPS3-206ENST00000486530 GAGE12HA6NDE8 117 aa13.82□□□□□ -0.2
HPS3-206ENST00000486530 SLC25A20O43772 301 aa13.82□□□□□ -0.2
HPS3-206ENST00000486530 CRPP02741 224 aa13.81□□□□□ -0.2
HPS3-206ENST00000486530 CCL18P55774 89 aa13.81□□□□□ -0.2
HPS3-206ENST00000486530 ENHOQ6UWT2 76 aa13.81□□□□□ -0.2
HPS3-206ENST00000486530 NBEAL1Q6ZS30 2694 aa13.81□□□□□ -0.2
HPS3-206ENST00000486530 KLK5Q9Y337 293 aaPredicted RBP13.8□□□□□ -0.2
HPS3-206ENST00000486530 DEFB121Q5J5C9 76 aa13.8□□□□□ -0.2
HPS3-206ENST00000486530 TEN1Q86WV5 123 aa13.8□□□□□ -0.2
HPS3-206ENST00000486530 WFDC10BQ8IUB3 73 aa13.8□□□□□ -0.2
HPS3-206ENST00000486530 TENM3Q9P273 2699 aa13.79□□□□□ -0.2
HPS3-206ENST00000486530 TRAV8-4A0A0B4J246 113 aa13.79□□□□□ -0.2
HPS3-206ENST00000486530 TM2D3Q9BRN9 247 aa13.79□□□□□ -0.2
HPS3-206ENST00000486530 LST1O00453 97 aa13.78□□□□□ -0.2
HPS3-206ENST00000486530 COX17Q14061 63 aa13.78□□□□□ -0.2
HPS3-206ENST00000486530 MGAM2Q2M2H8 2515 aa13.78□□□□□ -0.2
HPS3-206ENST00000486530 IGKV2-28A0A075B6P5 120 aa13.78□□□□□ -0.2
HPS3-206ENST00000486530 IGKV2D-28P01615 120 aa13.78□□□□□ -0.2
HPS3-206ENST00000486530 CLEC2BQ92478 149 aa13.78□□□□□ -0.2
HPS3-206ENST00000486530 KRTAP21-3Q3LHN1 58 aa13.77□□□□□ -0.21
HPS3-206ENST00000486530 UBE2WQ96B02 151 aa13.77□□□□□ -0.21
HPS3-206ENST00000486530 TRBV10-2A0A0K0K1G8 114 aa13.76□□□□□ -0.21
HPS3-206ENST00000486530 ESRGQ1W209 222 aa13.76□□□□□ -0.21
HPS3-206ENST00000486530 LINC00337Q8N6G1 96 aa13.76□□□□□ -0.21
HPS3-206ENST00000486530 LINC01600Q96MT4 127 aa13.76□□□□□ -0.21
HPS3-206ENST00000486530 SPAG11BQ08648 103 aa13.76□□□□□ -0.21
HPS3-206ENST00000486530 ANKRD29Q8N6D5 301 aa13.76□□□□□ -0.21
HPS3-206ENST00000486530 MRAPQ8TCY5 172 aa13.76□□□□□ -0.21
HPS3-206ENST00000486530 PPDPFLQ8WWR9 84 aa13.75□□□□□ -0.21
HPS3-206ENST00000486530 TRAV10A0A0B4J240 114 aa13.73□□□□□ -0.21
HPS3-206ENST00000486530 RPL28P46779 137 aaKnown RBP13.73□□□□□ -0.21
HPS3-206ENST00000486530 H3BT86 120 aa13.71□□□□□ -0.21
HPS3-206ENST00000486530 LINC01556Q5JQF7 62 aa13.7□□□□□ -0.22
HPS3-206ENST00000486530 MUC7Q8TAX7 377 aa13.7□□□□□ -0.22
HPS3-206ENST00000486530 HUWE1Q7Z6Z7 4374 aaKnown RBP13.7□□□□□ -0.22
HPS3-206ENST00000486530 C15orf53Q8NAA6 179 aa13.7□□□□□ -0.22
HPS3-206ENST00000486530 CARD19Q96LW7 228 aa13.7□□□□□ -0.22
HPS3-206ENST00000486530 C6orf223Q8N319 242 aa13.68□□□□□ -0.22
HPS3-206ENST00000486530 NDUFC2O95298 119 aa13.67□□□□□ -0.22
HPS3-206ENST00000486530 C9orf116Q5BN46 136 aaPredicted RBP13.67□□□□□ -0.22
HPS3-206ENST00000486530 UNQ6190/PRO20217Q6UXQ8 127 aa13.67□□□□□ -0.22
HPS3-206ENST00000486530 SMIM11BQ8TCY0 68 aa13.67□□□□□ -0.22
HPS3-206ENST00000486530 DNHD1Q96M86 4753 aa13.67□□□□□ -0.22
HPS3-206ENST00000486530 C10orf25Q5T742 122 aa13.66□□□□□ -0.22
HPS3-206ENST00000486530 KRTAP26-1Q6PEX3 210 aa13.66□□□□□ -0.22
HPS3-206ENST00000486530 GVQW2A0A096LPI5 108 aaPredicted RBP13.65□□□□□ -0.22
HPS3-206ENST00000486530 TRACP01848 142 aa13.65□□□□□ -0.22
HPS3-206ENST00000486530 NTN5Q8WTR8 489 aaPredicted RBP13.65□□□□□ -0.22
HPS3-206ENST00000486530 OR13C6PQ8NH95 151 aa13.64□□□□□ -0.23
HPS3-206ENST00000486530 LINC00526Q96FQ7 95 aa13.64□□□□□ -0.23
HPS3-206ENST00000486530 DNAH10OSP0CZ25 163 aa13.63□□□□□ -0.23
HPS3-206ENST00000486530 C1orf43Q9BWL3 253 aa13.62□□□□□ -0.23
HPS3-206ENST00000486530 FAM218AQ96MZ4 157 aa13.61□□□□□ -0.23
HPS3-206ENST00000486530 H0YGX0 51 aa13.61□□□□□ -0.23
HPS3-206ENST00000486530 ZNF561-AS1K7EIQ3 104 aa13.6□□□□□ -0.23
HPS3-206ENST00000486530 C6orf48Q9UBA6 75 aa13.59□□□□□ -0.23
HPS3-206ENST00000486530 TEX49A0A1B0GTD5 131 aa13.57□□□□□ -0.24
HPS3-206ENST00000486530 HIGD2BQ4VC39 106 aa13.57□□□□□ -0.24
HPS3-206ENST00000486530 LINC00588Q9Y4M8 146 aa13.57□□□□□ -0.24
HPS3-206ENST00000486530 DNAH9Q9NYC9 4486 aa13.57□□□□□ -0.24
HPS3-206ENST00000486530 C15orf56Q8N910 161 aa13.57□□□□□ -0.24
HPS3-206ENST00000486530 CAMK2N2Q96S95 79 aa13.57□□□□□ -0.24
HPS3-206ENST00000486530 B9D2Q9BPU9 175 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms